Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq60294 264 3e-68 seq60293 264 3e-68 seq20040 242 9e-62 seq20037 242 9e-62 seq8265 237 4e-60 seq20039 170 5e-40 seq20038 170 5e-40 seq20035 132 1e-28 seq20036 114 3e-23 seq66240 105 2e-20 >seq60294 Length=3854 Score = 264 bits (292), Expect = 3e-68 Identities = 302/404 (75%), Gaps = 30/404 (7%) Strand=Plus/Minus Query 11 ACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATTGTGCAA 70 ||||| ||||||||| | | |||||||||| ||| | |||||||| ||||||||| | || Sbjct 527 ACCCGTAGGCCTTCTACCTCCACGCGGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAA 468 Query 71 TATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGG 130 ||||||||||||||||||||||||||||||||| || ||||||||| |||||||||||| Sbjct 467 TATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCTTGTCTCAGTCCCAGTGTGGCTGA 408 Query 131 TCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCAACTAGC 190 |||||||||| ||||||||| |||| |||||| ||| || |||||| | ||||||||| Sbjct 407 TCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATTACCTCACCAACTAGC 348 Query 191 TAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGC 250 ||||| | | | ||| || | || ||| ||| || | || | Sbjct 347 TAATCAGACGCAAGCCCCTCC----TTGGGTGG------ATTCCTCCT-TTCGCTCCTCA 299 Query 251 GACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGCAGTTTCC 310 | | || | ||||||||| |||||||||| ||| ||||||||| ||||| ||| Sbjct 298 GCC--TACGGGGTATTAGCAGCCGTTTCCAGCTGTTGTCCCCCTCCCAAGGGCAGGTTCT 241 Query 311 CAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTGTTACCG 370 | | |||||||||||||||||||| ||| || || |||| ||| Sbjct 240 TACGCGTTACTCACCCGTCCGCCACT------GGAAACACCA-----CTTC------CCG 198 Query 371 TTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 | |||||||||||||| | || ||||||||||||||| ||||| Sbjct 197 TCCGACTTGCATGTGTAAAGCATGCCGCCAGCGTTCATCCTGAG 154 >seq60293 Length=4317 Score = 264 bits (292), Expect = 3e-68 Identities = 302/404 (75%), Gaps = 30/404 (7%) Strand=Plus/Minus Query 11 ACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATTGTGCAA 70 ||||| ||||||||| | | |||||||||| ||| | |||||||| ||||||||| | || Sbjct 527 ACCCGTAGGCCTTCTACCTCCACGCGGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAA 468 Query 71 TATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGG 130 ||||||||||||||||||||||||||||||||| || ||||||||| |||||||||||| Sbjct 467 TATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCTTGTCTCAGTCCCAGTGTGGCTGA 408 Query 131 TCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCAACTAGC 190 |||||||||| ||||||||| |||| |||||| ||| || |||||| | ||||||||| Sbjct 407 TCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATTACCTCACCAACTAGC 348 Query 191 TAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGC 250 ||||| | | | ||| || | || ||| ||| || | || | Sbjct 347 TAATCAGACGCAAGCCCCTCC----TTGGGTGG------ATTCCTCCT-TTCGCTCCTCA 299 Query 251 GACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGCAGTTTCC 310 | | || | ||||||||| |||||||||| ||| ||||||||| ||||| ||| Sbjct 298 GCC--TACGGGGTATTAGCAGCCGTTTCCAGCTGTTGTCCCCCTCCCAAGGGCAGGTTCT 241 Query 311 CAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTGTTACCG 370 | | |||||||||||||||||||| ||| || || |||| ||| Sbjct 240 TACGCGTTACTCACCCGTCCGCCACT------GGAAACACCA-----CTTC------CCG 198 Query 371 TTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 | |||||||||||||| | || ||||||||||||||| ||||| Sbjct 197 TCCGACTTGCATGTGTAAAGCATGCCGCCAGCGTTCATCCTGAG 154 >seq20040 Length=3849 Score = 242 bits (268), Expect = 9e-62 Identities = 303/413 (73%), Gaps = 32/413 (8%) Strand=Plus/Minus Query 4 CTTTACAACCCGAA--GGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCC 61 |||||||| | | | | ||||||||| |||||| || |||| ||| ||||| ||||| Sbjct 536 CTTTACAAGCGGCATTGCCCTTCTTCACTCACGCGATATTGCTGGATCGGGCTTTCGCCC 477 Query 62 ATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 121 ||||| ||| |||||||||||||||| ||||| |||||| || |||||||||||| |||| Sbjct 476 ATTGTCCAAGATTCCCCACTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCCAG 417 Query 122 TGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCG 181 |||||||| |||||||||| ||||||||| |||| |||||| ||| || |||||| | Sbjct 416 TGTGGCTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATTACCTCA 357 Query 182 CCAACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTT 241 |||||||||||||| | | | ||| || | || ||| ||| || Sbjct 356 CCAACTAGCTAATCAGACGCAAGCCCCTCC----TTGGGTGG------ATTCCTCCT-TT 308 Query 242 TGGTCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAG 301 | || | | | || | ||||||||| |||||||||| ||| ||||||||| | Sbjct 307 CGCTCCTCAGCC--TACGGGGTATTAGCAGCCGTTTCCAGCTGTTGTCCCCCTCCCAAGG 250 Query 302 GCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTC 361 |||| ||| | | |||||||||||||||||||| ||| || || |||| Sbjct 249 GCAGGTTCTTACGCGTTACTCACCCGTCCGCCACT------GGAAACACCA-----CTTC 201 Query 362 CTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 |||| |||||||||||||| | || ||||||||||||||| ||||| Sbjct 200 ------CCGTCCGACTTGCATGTGTAAAGCATGCCGCCAGCGTTCATCCTGAG 154 >seq20037 Length=4312 Score = 242 bits (268), Expect = 9e-62 Identities = 303/413 (73%), Gaps = 32/413 (8%) Strand=Plus/Minus Query 4 CTTTACAACCCGAA--GGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCC 61 |||||||| | | | | ||||||||| |||||| || |||| ||| ||||| ||||| Sbjct 536 CTTTACAAGCGGCATTGCCCTTCTTCACTCACGCGATATTGCTGGATCGGGCTTTCGCCC 477 Query 62 ATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 121 ||||| ||| |||||||||||||||| ||||| |||||| || |||||||||||| |||| Sbjct 476 ATTGTCCAAGATTCCCCACTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCCAG 417 Query 122 TGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCG 181 |||||||| |||||||||| ||||||||| |||| |||||| ||| || |||||| | Sbjct 416 TGTGGCTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATTACCTCA 357 Query 182 CCAACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTT 241 |||||||||||||| | | | ||| || | || ||| ||| || Sbjct 356 CCAACTAGCTAATCAGACGCAAGCCCCTCC----TTGGGTGG------ATTCCTCCT-TT 308 Query 242 TGGTCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAG 301 | || | | | || | ||||||||| |||||||||| ||| ||||||||| | Sbjct 307 CGCTCCTCAGCC--TACGGGGTATTAGCAGCCGTTTCCAGCTGTTGTCCCCCTCCCAAGG 250 Query 302 GCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTC 361 |||| ||| | | |||||||||||||||||||| ||| || || |||| Sbjct 249 GCAGGTTCTTACGCGTTACTCACCCGTCCGCCACT------GGAAACACCA-----CTTC 201 Query 362 CTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 |||| |||||||||||||| | || ||||||||||||||| ||||| Sbjct 200 ------CCGTCCGACTTGCATGTGTAAAGCATGCCGCCAGCGTTCATCCTGAG 154 >seq8265 Length=277 Score = 237 bits (262), Expect = 4e-60 Identities = 209/258 (81%), Gaps = 2/258 (1%) Strand=Plus/Minus Query 80 CTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCT 139 |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct 277 CTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCT 218 Query 140 CAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCAACTAGCTAATCCCAT 199 |||||||| || ||||||||||| |||| ||| ||||| | ||||| |||||||| | Sbjct 217 CAGACCAGTTACAGATCGTCGCCTTGGTGAGCCTTTACCTCACCAACAAGCTAATCTGAC 158 Query 200 CTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTT-GGTCTTGCGACGTTAT 258 |||| ||||| ||||| | |||| |||||| |||||| |||| | | | || ||| Sbjct 157 ATGGGCTCATCTGATAGCGGGAGGTCCGAAGATCCCCCCCTTTCCCCCGTAGGGCG-TAT 99 Query 259 GCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGCAGTTTCCCAGACATT 318 ||||||||||| | |||| | ||| |||||| | | ||||||| |||||| ||| Sbjct 98 GCGGTATTAGCGTTCCTTTCGAAACGTTGTCCCCCACTACCAGGCAGATTCCCATGTATT 39 Query 319 ACTCACCCGTCCGCCACT 336 |||||||||| |||| || Sbjct 38 ACTCACCCGTTCGCCGCT 21 >seq20039 Length=4276 Score = 170 bits (188), Expect = 5e-40 Identities = 154/193 (80%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 4 CTTTACAACCCGAA--GGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCC 61 |||||||| | | | | ||||||||| |||||| || |||| ||| ||||| ||||| Sbjct 500 CTTTACAAGCGGCATTGCCCTTCTTCACTCACGCGATATTGCTGGATCGGGCTTTCGCCC 441 Query 62 ATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 121 ||||| ||| |||||||||||||||| ||||| |||||| || |||||||||||| |||| Sbjct 440 ATTGTCCAAGATTCCCCACTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCCAG 381 Query 122 TGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCG 181 |||||||| |||||| |||||||||| | ||| | | || ||| ||| ||||| Sbjct 380 TGTGGCTGATCATCCGAAAAGACCAGCTAAGCATCATTGGCTTGGTCAGCCTTTACCTGA 321 Query 182 CCAACTAGCTAAT 194 ||||||| ||||| Sbjct 320 CCAACTACCTAAT 308 >seq20038 Length=3813 Score = 170 bits (188), Expect = 5e-40 Identities = 154/193 (80%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 4 CTTTACAACCCGAA--GGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCC 61 |||||||| | | | | ||||||||| |||||| || |||| ||| ||||| ||||| Sbjct 500 CTTTACAAGCGGCATTGCCCTTCTTCACTCACGCGATATTGCTGGATCGGGCTTTCGCCC 441 Query 62 ATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 121 ||||| ||| |||||||||||||||| ||||| |||||| || |||||||||||| |||| Sbjct 440 ATTGTCCAAGATTCCCCACTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCCAG 381 Query 122 TGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCG 181 |||||||| |||||| |||||||||| | ||| | | || ||| ||| ||||| Sbjct 380 TGTGGCTGATCATCCGAAAAGACCAGCTAAGCATCATTGGCTTGGTCAGCCTTTACCTGA 321 Query 182 CCAACTAGCTAAT 194 ||||||| ||||| Sbjct 320 CCAACTACCTAAT 308 >seq20035 Length=220 Score = 132 bits (146), Expect = 1e-28 Identities = 82/88 (93%), Gaps = 0/88 (0%) Strand=Plus/Minus Query 4 CTTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCAT 63 ||||||||||| ||||||||| ||| ||||||||||||||| ||||||||||||||||| Sbjct 88 CTTTACAACCCTAAGGCCTTCATCACTCACGCGGCATGGCTGGATCAGGCTTGCGCCCAT 29 Query 64 TGTGCAATATTCCCCACTGCTGCCTCCC 91 ||| |||||||||||||||||||||||| Sbjct 28 TGTCCAATATTCCCCACTGCTGCCTCCC 1 >seq20036 Length=236 Score = 114 bits (126), Expect = 3e-23 Identities = 77/86 (90%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 ||||||| || ||| ||||| |||| |||||||||||||||| |||||||| |||||||| Sbjct 86 TTTACAATCCTAAGACCTTCATCATTCACGCGGCATGGCTGCGTCAGGCTTTCGCCCATT 27 Query 65 GTGCAATATTCCCCACTGCTGCCTCC 90 | |||| ||||||||||||||||||| Sbjct 26 GCGCAAGATTCCCCACTGCTGCCTCC 1 >seq66240 Length=294 Score = 105 bits (116), Expect = 2e-20 Identities = 79/93 (85%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 102 GGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGC 161 |||||||||||||||||||||||||| | ||||||||||||||| |||| || | || Sbjct 1 GGACCGTGTCTCAGTTCCAGTGTGGCCGATCATCCTCTCAGACCGGCTACCCGTCTTAGC 60 Query 162 CTAGGTGGGCCATTACCCCGCCAACTAGCTAAT 194 || |||||||| ||||| | |||||||||| || Sbjct 61 CTTGGTGGGCCGTTACCTCACCAACTAGCTGAT 93 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1221487368384