Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq60294 129 1e-27 seq60293 129 1e-27 seq20039 116 8e-24 seq20038 116 8e-24 seq20040 114 3e-23 seq20037 114 3e-23 seq8265 100 6e-19 seq20036 93.3 9e-17 seq66240 87.8 4e-15 seq20035 82.4 2e-13 >seq60294 Length=3854 Score = 129 bits (142), Expect = 1e-27 Identities = 205/295 (69%), Gaps = 18/295 (6%) Strand=Plus/Minus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60 |||||||||||| |||||||||||||||||||| | ||| ||| Sbjct 604 GGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCCCGGATAC---------------CGT 560 Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120 | |||| ||| | |||| ||||| | | |||||| ||||| ||| ||||| Sbjct 559 C--ATTTTTTCTTCTCCGGGAAAAAAAGTTCATGACCCGTAGG-CCTTCTACCTCCACGC 503 Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180 | | ||| |||| || ||| |||||| |||||||| |||||||||||||||||| Sbjct 502 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAATATTCCCCACTGCTGCCTCCCGTAG 443 Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCAT 240 |||| ||| || ||||||||| ||| ||||| || | ||||||| || | ||| || Sbjct 442 GAGTCTGGGCCTTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGAT 383 Query 241 CGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAACGCATCCCCATC 295 | | | || ||| || ||||| | || |||| ||||| ||||| ||| || Sbjct 382 CATCGCCTTGGTAAGCTATTACCTCACCAACTAGCTAATCAGACGCAAGCCCCTC 328 >seq60293 Length=4317 Score = 129 bits (142), Expect = 1e-27 Identities = 205/295 (69%), Gaps = 18/295 (6%) Strand=Plus/Minus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60 |||||||||||| |||||||||||||||||||| | ||| ||| Sbjct 604 GGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCCCGGATAC---------------CGT 560 Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120 | |||| ||| | |||| ||||| | | |||||| ||||| ||| ||||| Sbjct 559 C--ATTTTTTCTTCTCCGGGAAAAAAAGTTCATGACCCGTAGG-CCTTCTACCTCCACGC 503 Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180 | | ||| |||| || ||| |||||| |||||||| |||||||||||||||||| Sbjct 502 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAATATTCCCCACTGCTGCCTCCCGTAG 443 Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCAT 240 |||| ||| || ||||||||| ||| ||||| || | ||||||| || | ||| || Sbjct 442 GAGTCTGGGCCTTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGAT 383 Query 241 CGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAACGCATCCCCATC 295 | | | || ||| || ||||| | || |||| ||||| ||||| ||| || Sbjct 382 CATCGCCTTGGTAAGCTATTACCTCACCAACTAGCTAATCAGACGCAAGCCCCTC 328 >seq20039 Length=4276 Score = 116 bits (128), Expect = 8e-24 Identities = 145/199 (73%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 105 CCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCA 164 ||||| || |||||| | | ||||| || | || ||| |||||| |||| ||||| || Sbjct 482 CCTTCTTCACTCACGCGATATTGCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCA 423 Query 165 CTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCT 224 |||||||| ||||| ||||| || |||||||||||| ||| ||||| || | ||| Sbjct 422 CTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCGAA 363 Query 225 CAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAAC 284 ||| | ||| |||| | |||| ||| ||| ||||| || |||||||||| || Sbjct 362 AAGACCAGCTAAGCATCATTGGCTTGGTCAGCCTTTACCTGACCAACTACCTAATACTAC 303 Query 285 GCATCCCCATCGTACACCG 303 ||| | |||| ||| || Sbjct 302 GCAGGCTCATCAAACAGCG 284 >seq20038 Length=3813 Score = 116 bits (128), Expect = 8e-24 Identities = 145/199 (73%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 105 CCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCA 164 ||||| || |||||| | | ||||| || | || ||| |||||| |||| ||||| || Sbjct 482 CCTTCTTCACTCACGCGATATTGCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCA 423 Query 165 CTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCT 224 |||||||| ||||| ||||| || |||||||||||| ||| ||||| || | ||| Sbjct 422 CTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCGAA 363 Query 225 CAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAAC 284 ||| | ||| |||| | |||| ||| ||| ||||| || |||||||||| || Sbjct 362 AAGACCAGCTAAGCATCATTGGCTTGGTCAGCCTTTACCTGACCAACTACCTAATACTAC 303 Query 285 GCATCCCCATCGTACACCG 303 ||| | |||| ||| || Sbjct 302 GCAGGCTCATCAAACAGCG 284 >seq20040 Length=3849 Score = 114 bits (126), Expect = 3e-23 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 105 CCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCA 164 ||||| || |||||| | | ||||| || | || ||| |||||| |||| ||||| || Sbjct 518 CCTTCTTCACTCACGCGATATTGCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCA 459 Query 165 CTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCT 224 |||||||| ||||| ||||| || |||||||||||| ||| ||||| || | |||||| Sbjct 458 CTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCT 399 Query 225 CAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAAC 284 | || | ||| ||| | | || ||| || ||||| | || |||| ||||| || Sbjct 398 CGGACCAGCTACTGATCATCGCCTTGGTAAGCTATTACCTCACCAACTAGCTAATCAGAC 339 Query 285 GCATCCCCATC 295 ||| ||| || Sbjct 338 GCAAGCCCCTC 328 >seq20037 Length=4312 Score = 114 bits (126), Expect = 3e-23 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 105 CCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCA 164 ||||| || |||||| | | ||||| || | || ||| |||||| |||| ||||| || Sbjct 518 CCTTCTTCACTCACGCGATATTGCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCA 459 Query 165 CTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCT 224 |||||||| ||||| ||||| || |||||||||||| ||| ||||| || | |||||| Sbjct 458 CTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCT 399 Query 225 CAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAAC 284 | || | ||| ||| | | || ||| || ||||| | || |||| ||||| || Sbjct 398 CGGACCAGCTACTGATCATCGCCTTGGTAAGCTATTACCTCACCAACTAGCTAATCAGAC 339 Query 285 GCATCCCCATC 295 ||| ||| || Sbjct 338 GCAAGCCCCTC 328 >seq8265 Length=277 Score = 100 bits (110), Expect = 6e-19 Identities = 91/115 (79%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 165 CTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCT 224 |||||||||||||||||||| |||||||||||||||||||| |||| || | |||||| Sbjct 277 CTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCT 218 Query 225 CAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279 |||| | || ||||| | || |||| ||| ||||| | || || | ||||| Sbjct 217 CAGACCAGTTACAGATCGTCGCCTTGGTGAGCCTTTACCTCACCAACAAGCTAAT 163 >seq20036 Length=236 Score = 93.3 bits (102), Expect = 9e-17 Identities = 83/103 (81%), Gaps = 1/103 (1%) Strand=Plus/Minus Query 73 TCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGT 132 ||||| | |||||| |||||||||| ||| |||||||| ||||||| | |||||| Sbjct 102 TCCCTACTGAAAGAATTTTACAATCCTAAGA-CCTTCATCATTCACGCGGCATGGCTGCG 44 Query 133 TCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCC 175 |||| || ||| |||||| ||| ||||| ||||||||||||| Sbjct 43 TCAGGCTTTCGCCCATTGCGCAAGATTCCCCACTGCTGCCTCC 1 >seq66240 Length=294 Score = 87.8 bits (96), Expect = 4e-15 Identities = 75/93 (81%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 187 GGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGG 246 ||||||||||||||||||| ||||| || | |||||||||| | ||| || || ||| Sbjct 1 GGACCGTGTCTCAGTTCCAGTGTGGCCGATCATCCTCTCAGACCGGCTACCCGTCTTAGC 60 Query 247 CTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279 || |||||||||||||| | || |||| || || Sbjct 61 CTTGGTGGGCCGTTACCTCACCAACTAGCTGAT 93 >seq20035 Length=220 Score = 82.4 bits (90), Expect = 2e-13 Identities = 76/95 (80%), Gaps = 1/95 (1%) Strand=Plus/Minus Query 82 AAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCT 141 ||||| ||||||| || || |||||||| |||||| | ||||||| |||| || Sbjct 94 AAAGAGCTTTACAACCCTAAGG-CCTTCATCACTCACGCGGCATGGCTGGATCAGGCTTG 36 Query 142 CGTCCATTGACCAATATTCCTCACTGCTGCCTCCC 176 || |||||| |||||||||| |||||||||||||| Sbjct 35 CGCCCATTGTCCAATATTCCCCACTGCTGCCTCCC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068002044608