Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq25475 192 5e-44 seq46009 113 4e-20 seq17518 100 2e-16 seq17517 100 2e-16 >seq25475 Length=2349 Score = 192 bits (212), Expect = 5e-44 Identities = 557/842 (66%), Gaps = 18/842 (2%) Strand=Plus/Minus Query 61096 ATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGAC 61155 |||||||| || || ||||| || |||||||| | || || |||||| | ||| |||| Sbjct 2074 ATGTACAAGAAAGCCGAAGCCTCTTTCTGGACCGCCGAAGAAGTCGATCTCTCCCAAGAT 2015 Query 61156 ATGAATGACTGGGAG-CGTTTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGC 61214 | | ||||| | | | ||| |||||| | || || || ||||| | || Sbjct 2014 AACCAGCACTGGATCTCCCTCACCGA-CGGTGAGCGCCACTTTGTTTCGCATGTCCTTGC 1956 Query 61215 GTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGA 61274 ||||||||||| || ||||| |||||| |||||| | | | | ||| | | || Sbjct 1955 CTTCTTTGCCGCCTCCGACGGAATCGTCTTGGAGAATCTCGCCGGAAGATTCATGAAAGA 1896 Query 61275 GGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCA 61334 | ||| | || ||||||||| |||||||| |||||||| || || |||||| |||| Sbjct 1895 AATCCAAATCTCAGAGGCGCGTGCCTTCTACGGATTCCAGATCGCAATCGAGAATATCCA 1836 Query 61335 CTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACG 61394 || |||||||| | ||||| |||| |||| |||| || || || | || Sbjct 1835 TTCAGAGATGTATTCTCTTCTCCTCGAGGCGTATATCAAAGATTCAGCAGAGAAGAATCG 1776 Query 61395 ATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAA--GCGGATTGGGCCTTC 61452 ||||| | || || |||||||| || || ||| ||| ||||| ||||| | Sbjct 1775 TTTGTTTCACGCGATTGAGACGATTCC--ATGTATTGCGAAAAAGGCGGAATGGGCGATG 1718 Query 61453 AATTGGATCACCAGTACAACGGCTACATTTGGTGA-ACGATTGCTGGCATTTGCGGTGGT 61511 || ||||| | | | | | |||||| | ||| | ||||| | |||||||| || Sbjct 1717 AAATGGAT---CGATTCGTCTGATACATTCGCTGAGAGGATTG-TAGCATTTGCTTGCGT 1662 Query 61512 CGAGGGTGTATTTTTCAGTGGATCGTTT-GCCGCAATCTTTTGGTTGAAGAAACGTGGAC 61570 || ||| ||||||| || | |||| || || || ||| | || ||||| || Sbjct 1661 TGAAGGTATATTTTTTTCAGG-TAGTTTCTGTGCGATTTTCTGGCTCAAAAAACGCGGTT 1603 Query 61571 TTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTG 61630 | ||||| || | || || || ||| | || ||||||||||| || | ||||| | Sbjct 1602 TAATGCCAGGATTAACTTTTTCAAACGAGCTTATTTCACGCGACGAAGGTCTTCATTGCG 1543 Query 61631 ATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGG 61690 |||| ||| |||||| | | | | ||| | || || || ||||| ||| Sbjct 1542 ATTTCGCTTGTTTGCTTTACTCATTATTAAAAAAGAAAC-TCAGT--GAAGAGCGCGTGC 1486 Query 61691 GTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCG 61750 |||||| ||||| ||||| ||||| ||| ||| || ||||| | || Sbjct 1485 AGACGATTGTGCGTGACGCGGTTGAGATCGAGAGGGAGTTTGTGTGCGACGCGCTTCCTT 1426 Query 61751 TCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACC 61810 | | | | || ||||| ||| | ||| ||||||||| | |||||| || Sbjct 1425 GCGCGTTGGTTGGGATGAACGGTGATTTGATGAGTACGTATATTGAGTATGTTGCTGATA 1366 Query 61811 GTCTGTTGGTCGA-TTTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTTGATTTC 61869 | |||||| || |||||| || | ||| |||||| || || || ||||||| Sbjct 1365 GGTTGTTGGGGGAGCTTGGGTGTG-GGAAGATTTATAATGTGACGAATCCGTTTGATTGG 1307 Query 61870 ATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGACTAT 61929 ||||| |||||||||| | || ||||| || ||||| ||||| || || || || ||| Sbjct 1306 ATGGATCTGATTTCGCTTCAGGGGAAGACCAACTTTTTTGAGAAGCGCGTTGGAGAGTAT 1247 Query 61930 CA 61931 || Sbjct 1246 CA 1245 >seq46009 Length=1074 Score = 113 bits (124), Expect = 4e-20 Identities = 369/561 (66%), Gaps = 13/561 (2%) Strand=Plus/Plus Query 61096 ATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGAC 61155 |||||||||||||| ||||| |||||||| | || || || ||| | ||| | || Sbjct 52 ATGTACAAAAAGGCTGAAGCCAGTTTCTGGACCGCCGAAGAAGTAGATCTCTCCTATGAT 111 Query 61156 ATGAATGACTGGGAGCGTTTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCG 61215 | || | |||| || || | || | || ||||| ||| || | || Sbjct 112 GTACATCATTGGGCAACCTTGTCAGACTCCGAGAAGCACTTCATATCACACGTCCTTGCT 171 Query 61216 TTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTAT-TGGAACGTTTCGCGCAGGA 61274 || ||||| | || || || ||||| |||||||| || || ||||| | | || Sbjct 172 TTTTTTGCAACATCTGATGGAATCGTTTTGGAGAATTTGGCTGCAAGGTTTCT-GAATGA 230 Query 61275 GGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCA 61334 || ||| | ||||||| || |||||||| || ||||| || || |||||| | || Sbjct 231 CGTTCAAATCCCGGAGGCTCGGGCATTCTACGGGTTTCAGATAGCAATCGAGAATATTCA 290 Query 61335 CTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAG-CGGGCG-GAACGTGAA 61392 || |||||||| ||| | || | || || || || | || | | || ||| || Sbjct 291 TTCTGAGATGTATAGTTTGCTGTTGGAGACATATATTAAAGATTCAGTCGAGAAGCATAA 350 Query 61393 CGATTGTTCAATGCCATCGAGACGATACCG-GCGGTGAAGCGGAAAGCGGATTGGGCCTT 61451 |||||||||||| || || | | || | | || | |||| || || ||||| || Sbjct 351 --ATTGTTCAATGCAATTGAAAATCTTCCTTGTGTTGCAA-GGAAGGCTGAATGGGCATT 407 Query 61452 CAATTGGATCACCAGTACAACGGCTACATTTGGTGA-ACGATTGCTGGCATTTGCGGTGG 61510 | |||||| | |||| | || | |||||| || | | ||| ||| ||||| | Sbjct 408 GAGTTGGATTAACAGTTCCAC---TTCATTTGCGGAGAGGCTTGTTGGT-TTTGCATGTG 463 Query 61511 TCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGAC 61570 | || || |||||||| ||| || || || || ||| | || || | |||| Sbjct 464 TTGAAGGGATATTTTTCTCAGGAAGCTTCTGTGCCATATTCTGGCTTAAAAAGAGAGGAC 523 Query 61571 TTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTG 61630 | ||||| |||||||| ||| ||||| | || || | |||||||| | || |||| Sbjct 524 TAATGCCAGGTCTGACATTCTCAAATGAACTAATCTCTAGAGACGAGGGTCTTCACTGTG 583 Query 61631 ATTTTGCTGTTTTGCTATTCA 61651 |||||||| |||||| || Sbjct 584 ATTTTGCTTGCATGCTATACA 604 >seq17518 Length=2997 Score = 100 bits (110), Expect = 2e-16 Identities = 186/271 (69%), Gaps = 4/271 (1%) Strand=Plus/Minus Query 66299 GGACACATCAGCGACCAATCACCATCCTGTTCT--ACACGACGCATAAATAGATCAGGTA 66356 || || | ||| ||||||||||||| || || || | |||||| |||||||| | Sbjct 1327 GGGCAAAACAGGGACCAATCACCAT--TGCTCCGAACTCTTTCCATAAAAAGATCAGGCA 1270 Query 66357 TCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCA 66416 ||| ||||| || || | ||| || || || || || || | ||||| ||| | || Sbjct 1269 CCCAAAGGGCATAAAATAAATCTCGAGCACGCTGTTCTTCCTTTCCGTGGTTTATTTTCA 1210 Query 66417 AGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCA 66476 | || | ||| ||||| | || |||||||||||||||| ||| | || || | || Sbjct 1209 ACTCCAAGAATTCAAATACATCAGCATGCCATGGTTCCAAGTATACAGCAAAAGCACCTT 1150 Query 66477 TACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCG 66536 | | ||||| || || || || || || || || | ||||| ||||||| ||| | Sbjct 1149 TTCTCTTGCCTCCTCCCTGATCAACATATCGGGCAGTGTCATTGAACACACGCAGCATTG 1090 Query 66537 GTACGAGCCCGTTAGATTTGCCATTGGTGCC 66567 | | || || ||||| | ||||| || || Sbjct 1089 GAATGATACCATTAGACGTCCCATTTGTTCC 1059 >seq17517 Length=2996 Score = 100 bits (110), Expect = 2e-16 Identities = 186/271 (69%), Gaps = 4/271 (1%) Strand=Plus/Minus Query 66299 GGACACATCAGCGACCAATCACCATCCTGTTCT--ACACGACGCATAAATAGATCAGGTA 66356 || || | ||| ||||||||||||| || || || | |||||| |||||||| | Sbjct 1326 GGGCAAAACAGGGACCAATCACCAT--TGCTCCGAACTCTTTCCATAAAAAGATCAGGCA 1269 Query 66357 TCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCA 66416 ||| ||||| || || | ||| || || || || || || | ||||| ||| | || Sbjct 1268 CCCAAAGGGCATAAAATAAATCTCGAGCACGCTGTTCTTCCTTTCCGTGGTTTATTTTCA 1209 Query 66417 AGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCA 66476 | || | ||| ||||| | || |||||||||||||||| ||| | || || | || Sbjct 1208 ACTCCAAGAATTCAAATACATCAGCATGCCATGGTTCCAAGTATACAGCAAAAGCACCTT 1149 Query 66477 TACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCG 66536 | | ||||| || || || || || || || || | ||||| ||||||| ||| | Sbjct 1148 TTCTCTTGCCTCCTCCCTGATCAACATATCGGGCAGTGTCATTGAACACACGCAGCATTG 1089 Query 66537 GTACGAGCCCGTTAGATTTGCCATTGGTGCC 66567 | | || || ||||| | ||||| || || Sbjct 1088 GAATGATACCATTAGACGTCCCATTTGTTCC 1058 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397206250267760