Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicia_20faba_20[genbank_20GCA_5F001375635.1_202015-04-20] 74,659 sequences; 80,362,707 total letters Query= NC_031906.1 Length=198190 Score E Sequences producing significant alignments: (Bits) Value seq63568 542 4e-149 seq65592 152 7e-32 seq67767 123 3e-23 >seq63568 Length=1222 Score = 542 bits (600), Expect = 4e-149 Identities = 723/994 (73%), Gaps = 12/994 (1%) Strand=Plus/Minus Query 188851 TTCTGCGAATGGGTCACCTCTACTAACAACCGTCTGTATGTCGGTTGGTTCGGTGTCCTG 188910 ||||| | ||| | ||| ||| | |||||||| || | || ||||| ||||| || Sbjct 1083 TTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 1024 Query 188911 ATGATCCCTACGCTTCTCG-CTGCAACCATCTGC-TTCATCGTCGCCTTTGTCGCTGCAC 188968 ||||||||||| ||| | | | ||||| |||| || || |||| || | ||||| | Sbjct 1023 ATGATCCCTAC-CTTATTGACCGCAACT-TCTGTATTTATTATCGCTTTCATTGCTGCCC 966 Query 188969 CCCCTGTAGACATTGATGGCATCCGCGAACCCGTCGCTGGTTCACTCATGTATGGAAACA 189028 | || ||||| |||||||| || || || || || |||| || || | || ||||||| Sbjct 965 CTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTACGGAAACA 906 Query 189029 ACATCATCTCTGGTGCTGTTGTCCCTTCATCCAACGCAATTGGTCTTCACTTCTACCCCA 189088 | || || |||||||| || | ||| | || || || ||| | ||||| ||||| | Sbjct 905 ATATTATTTCTGGTGCCATTATTCCTACTTCTGCGGCTATCGGTTTGCACTTTTACCCGA 846 Query 189089 TCTGGGAAGCCGCCTCACTCGATGAGTGGCTCTACAACGGTGGTCCTTTCCAACTGGTAG 189148 | |||||||| || || | ||||| ||| | ||||| |||||||||| |||| | | Sbjct 845 TATGGGAAGCTGCATCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAACTAATTG 786 Query 189149 TCTTCCACTTCCTCATCGGCATCTACGCCT---ACATGGGTCGTGAGTGGGAACTCTCTT 189205 | | |||||| | | || | || || | |||||||||||||||||||||| || Sbjct 785 TTCTACACTTCTTACTTGG--TGTA-GCTTGTTACATGGGTCGTGAGTGGGAACTTAGTT 729 Query 189206 ACCGTCTCGGTATGCGTCCTTGGATCTGCA-TTGCTTACTCTGCACCTGTTGCAGCAGCA 189264 ||||| |||||||| |||||||| ||| |||| || || || || || ||||| || Sbjct 728 TTCGTCTGGGTATGCGCCCTTGGAT-TGCTGTTGCATATTCAGCTCCCGTCGCAGCTGCT 670 Query 189265 TCCGCAGTCTTTCTGGTCTATCCTTTTGGTCAAGGTTCTTTCTCTGACGCAATGCCCTTG 189324 | ||||| || || |||| || |||||||||| || || || | ||||| | Sbjct 669 ACTGCAGTTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCAGATGGTATGCCTCTA 610 Query 189325 GGTATCAGTGGAACCTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATG 189384 || ||| ||| || ||||||| ||| |||| || || || ||||| || || || ||| Sbjct 609 GGAATCTCTGGTACTTTCAACTTTATGATTGTATTTCAGGCTGAGCATAATATTCTTATG 550 Query 189385 CACCCCTTCCACATGCTGGGAGTCGCAGGTGTCTTCGGTGGTTCACTGTTCTCCGCAATG 189444 ||||| || |||||| | || || || ||||| ||||| || || || ||| || ||| Sbjct 549 CACCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATG 490 Query 189445 CATGGTTCACTCGTTACCTCTTCACTGGTTCGTGAAACCACTGAAACCGAGTCCCAGAAC 189504 || ||||| | || || ||| || | | |||||||| |||| || || || Sbjct 489 CACGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAAT 430 Query 189505 TATGGTTACAAGTTTGGACAAGAAGAAGAAACGTACAACATCGTTGCTGCTCATGGATAT 189564 | ||||||| || || ||||| |||||||| || || || || |||||||| || ||| Sbjct 429 GAAGGTTACAGATTCGGTCAAGAGGAAGAAACCTATAATATTGTAGCTGCTCACGGTTAT 370 Query 189565 TTCGGTCGTCTTATCTTCCAATATGCATCGTTCAACAACTCCCGTTCACTTCACTTCTTC 189624 || || || | |||||||||||||| |||||||| || || || | || |||||| Sbjct 369 TTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGCTCTTTACATTTCTTC 310 Query 189625 CTCGCTGCCTGGCCAGTCGTGGGTATCTGGTTTACCGCCCTCGGCGTCAGCACCATGGCA 189684 || ||||| ||||| || || ||||||||||||||||| | || ||||||| ||||| Sbjct 309 CTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCGTTAGGTATCAGCACTATGGCT 250 Query 189685 TTCAACCTCAATGGGTTCAACTTCAATCAATCCATTCTTGATGGTCAAGGTCGTGTTCTG 189744 ||||| | ||||| ||||| || || ||||| | ||||| ||||||||||||| | Sbjct 249 TTCAATTTAAATGGTTTCAATTTTAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATT 190 Query 189745 AACACATGGGCAGACGTTCTCAACCGTGCTGGTCTTGGTATGGAAGTCATGCATGAGCGT 189804 || || ||||| || || | ||||||||| |||||||||||||| |||||||| ||| Sbjct 189 AATACCTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGT 130 Query 189805 AACGCTCACAACTTCCCTCTTGATCTGGCAGCAG 189838 || ||||| || |||||||| || || || |||| Sbjct 129 AATGCTCATAATTTCCCTCTAGACCTAGCTGCAG 96 >seq65592 Length=292 Score = 152 bits (168), Expect = 7e-32 Identities = 150/194 (77%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 190806 GGTCTTGCTCTCAACCTTCGTGCTTATGACTTTGTATCCCAAGAGATCAGAGCAGCAGAA 190865 ||||| || || ||||| ||||| ||||||||||| || ||||| ||| | ||||||||| Sbjct 18 GGTCTGGCCCTGAACCTGCGTGCCTATGACTTTGTTTCTCAAGAAATCCGCGCAGCAGAA 77 Query 190866 GATCCAGAGTTCGAGACTTTTTACACAAAAAATATACTTTTGAATGAAGGTCTTCGTTCA 190925 ||||| || || |||||||| ||||| |||||||| || || || |||||| ||||| | Sbjct 78 GATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTCTTAAACGAAGGTATTCGTGCG 137 Query 190926 TGGTTGGCACCTGTTGATCAACCCCATGAGAATTTTGTATTTCCAGAAGAAGTATTGCCA 190985 ||| |||| || ||||| || ||||| || || |||| || || || || | ||| Sbjct 138 TGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCA 197 Query 190986 AGAGGCAACGCTCT 190999 | || |||||||| Sbjct 198 CGTGGAAACGCTCT 211 >seq67767 Length=213 Score = 123 bits (136), Expect = 3e-23 Identities = 144/192 (75%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 190260 CAACTTGGGGGACTCTGGGCTTTTGTGGCGCTCCACGGGGCTTTCGCTCTAATTGGATTC 190319 ||| | || || || ||| ||||||| || || ||||| ||||||| |||| || || Sbjct 21 CAATTAGGTGGTCTGTGGACTTTTGTTGCTCTTCACGGTGCTTTCGGATTAATAGGTTTT 80 Query 190320 ATGCTTCGTCAGTTTGAACTGGCACG-TCTCATCGGTATCCGTCCTTACAATGCTATTGC 190378 ||| | ||||| |||||||| || || ||| || | | || ||||| ||||| || || Sbjct 81 ATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT-TGCGGCCTTATAATGCAATCGC 139 Query 190379 GTTCTCTGGTCCTATCGCTGTTTTTGTTAGCGTCTTTCTCATCTACCCTCTGGGTCAATC 190438 ||||| ||||| || |||||||||||| ||||| || || || || ||||| || || Sbjct 140 ATTCTCCGGTCCAATTGCTGTTTTTGTTTCTGTCTTCCTGATTTATCCACTGGGCCAGTC 199 Query 190439 GAGTTGGTTCTT 190450 |||||||||| Sbjct 200 TGGTTGGTTCTT 211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633488252766000