Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq50 215 9e-54 seq9 210 4e-52 seq4 206 5e-51 seq2 196 9e-48 seq170 125 1e-26 seq175 118 2e-24 >seq50 Length=345246 Score = 215 bits (238), Expect = 9e-54 Identities = 199/248 (80%), Gaps = 3/248 (1%) Strand=Plus/Plus Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130 || |||||||||| || |||||||| |||||||| |||| |||| | |||||||||||| Sbjct 7872 CTGTTACTTTGAAGAACTTAGAGTGCTCAAAGCAAGCCTACGCTCTGGATACATTAGCAT 7931 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190 || |||| | |||||| | | | ||||| |||||| | ||| || |||||||| Sbjct 7932 GGGATAACACCATAGGAT-TCTGATCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGAT 7990 Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250 ||| ||||| ||||| ||| | ||||| || |||||||||||||||||||||||||| Sbjct 7991 TAACAGGGACAGTCGCGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 8050 Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310 ||||| ||| ||| ||||||| || |||||||||||||||||||||| |||||||| Sbjct 8051 GAAAGACGAACAACTACGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAA 8109 Query 311 GTTAGGGG 318 ||| |||| Sbjct 8110 GTTGGGGG 8117 Score = 196 bits (216), Expect = 9e-48 Identities = 186/234 (79%), Gaps = 3/234 (1%) Strand=Plus/Plus Query 86 AAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCATGGAATAATAGAATA 144 ||||||||||| |||||||| |||| |||| | |||||||||||||| |||| | | | Sbjct 2012 AAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGGATACATTAGCATGGGATAACACCACA 2071 Query 145 GGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTC 204 ||| | | | ||||| |||||| | ||| || ||||||||||| ||||| |||| Sbjct 2072 GGAT-TCTGATCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGATTAACAGGGACAGTC 2130 Query 205 GGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTAC 264 ||||| | ||||| || || ||||||||||||||||||||||| |||| ||| || Sbjct 2131 GGGGGCATTCGTATTTCATAGTTAGAGGTGAAATTCTTGGATTTATGAAAGAAGAACAAC 2190 Query 265 TGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 || |||||| || |||||||||||||||||||||| ||||||||||| |||| Sbjct 2191 TGTGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAAGTTGGGGG 2243 >seq9 Length=31747250 Score = 210 bits (232), Expect = 4e-52 Identities = 199/249 (80%), Gaps = 5/249 (2%) Strand=Plus/Plus Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130 || |||||||||| ||||||||||| |||||| | |||| |||| | |||||||||||| Sbjct 25144409 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGGAAGCCTACGCTCTGGATACATTAGCAT 25144468 Query 131 GGAATAATAGAATAGGACGTGCGGTTCT-ATTTTGTTGGTTTCTAGGACCGCCGTAATGA 189 || |||| | | |||| | | | ||| ||| |||||| | ||| || ||||||| Sbjct 25144469 GGGATAACACCACAGGA--TTCTGATCTTATTGTGTTGGCCTTCGGGATCGGAGTAATGA 25144526 Query 190 TTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTA 249 |||| ||||| ||||||||| | ||||| || ||||||||||||||||||||||||| Sbjct 25144527 TTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTA 25144586 Query 250 TTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAA 309 | |||| ||| ||||| ||||| || |||||||||||||||||||||| ||||||| Sbjct 25144587 TGAAAGAGGAACAACTGCTAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAA 25144645 Query 310 AGTTAGGGG 318 |||| |||| Sbjct 25144646 AGTTGGGGG 25144654 >seq4 Length=34671004 Score = 206 bits (228), Expect = 5e-51 Identities = 197/248 (79%), Gaps = 3/248 (1%) Strand=Plus/Minus Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130 || |||||||||| ||||||||||| |||||||| |||| |||| | |||||||||||| Sbjct 14796133 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGGATACATTAGCAT 14796074 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190 || |||| | | |||| | | | ||||| ||||| | ||| || |||||||| Sbjct 14796073 GGGATAACACCACAGGAT-TCTGATCCTATTGCGTTGGCCTTCGGGATCGGAGTAATGAT 14796015 Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250 || ||||| ||||||||| | ||||| || |||||||||||||||||||||||||| Sbjct 14796014 AAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 14795955 Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310 ||||| ||| |||| |||||| || | |||||||||||||||||||| |||||||| Sbjct 14795954 GAAAGACGAACAACTGTGAAAGCATTTGCAAAGGATGTTTTCATTAATCA-AGAACGAAA 14795896 Query 311 GTTAGGGG 318 ||| |||| Sbjct 14795895 GTTGGGGG 14795888 >seq2 Length=35625406 Score = 196 bits (216), Expect = 9e-48 Identities = 212/277 (77%), Gaps = 3/277 (1%) Strand=Plus/Plus Query 43 CCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAA 102 |||| ||||| || | || | || | || |||||||||| ||||||||||| ||||| Sbjct 9191679 CCTTAACTGGCTGGGTCGTGCCTCCGGTGCTGTTACTTTGAAGAAATTAGAGTGCTCAAA 9191738 Query 103 GCAGGCCTTTGCTC-GAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATT 161 ||| |||| |||| | |||||| | ||||| |||| | | |||| | | ||||||| Sbjct 9191739 GCAAGCCTACGCTCTGGATACATAAACATGGGATAACACCACAGGAT-TCTGATTCTATT 9191797 Query 162 TTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCA 221 |||||| | ||| || ||||||||||| ||||| | | ||||| | ||||| Sbjct 9191798 GTGTTGGCCTTCGGGATCGGAGTAATGATTAACAGGGACAATTGGGGGCATTCGTATTTC 9191857 Query 222 ATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCA 281 || |||||||||||||||||||||||||| |||| ||| ||| ||||||| || ||| Sbjct 9191858 ATAGTCAGAGGTGAAATTCTTGGATTTATGAAAGATGAACAACTACGAAAGCATTTGCCA 9191917 Query 282 AGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 ||||||||||||||||||| |||||| | || |||| Sbjct 9191918 AGGATGTTTTCATTAATCA-AGAACGATATTTGGGGG 9191953 >seq170 Length=248560 Score = 125 bits (138), Expect = 1e-26 Identities = 177/244 (73%), Gaps = 5/244 (2%) Strand=Plus/Minus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGA-ATACATTAGCATGGA 133 |||||||||| |||||| |||| | ||| || | || | ||| | ||| ||||| ||| Sbjct 220234 TTACTTTGAACAAATTATAGTGCTTAAAACAAGTCTATTCTCTAGATAGATTAGTATGAG 220175 Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193 |||| | | | | | | | ||||| |||||| || || | | ||||||||||| Sbjct 220174 ATAACACTAAAAAAA-TATGATCCTATTGTGTTGGCCTC-AGAATCTTAGTAATGATTAA 220117 Query 194 TAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGA 253 | ||| |||| ||||| | |||| || |||||| |||||||||| ||| ||| | Sbjct 220116 CAAGGAAAGTCAGGGGTATTCATATTTCATAGTCAGAATTGAAATTCTTAAATTCATTAA 220057 Query 254 AGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTT 313 |||| || | ||| ||||| || |||| ||||||||||||||| | ||| ||||||| Sbjct 220056 AGACAAAAAATTGCAAAAGCATTTTCCAATGATGTTTTCATTAATAA--GAATGAAAGTT 219999 Query 314 AGGG 317 ||| Sbjct 219998 GGGG 219995 >seq175 Length=221108 Score = 118 bits (130), Expect = 2e-24 Identities = 97/117 (83%), Gaps = 1/117 (1%) Strand=Plus/Minus Query 202 GTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAAC 261 |||||||| | ||||| || ||||| |||||||||||||||||||| ||||| ||| Sbjct 13211 GTCGGGGGCATTCGTATTTCATAGTCAGTGGTGAAATTCTTGGATTTATGAAAGACGAAC 13152 Query 262 TACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 |||| ||||| || |||||||||||||||||||||| ||||||||||| |||| Sbjct 13151 ACCTGCTAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAAGTTGGGGG 13096 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 914857944000