Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq37374 273 5e-71 seq37375 248 2e-63 seq6 172 1e-40 seq627 111 4e-22 seq5 82.4 2e-13 >seq37374 Length=151683 Score = 273 bits (302), Expect = 5e-71 Identities = 310/418 (74%), Gaps = 27/418 (6%) Strand=Plus/Minus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 |||||||||||| || || ||||||| ||||||| ||||||| ||| |||||| Sbjct 104640 GCATCTTCACAGACATGTCTATTTCACCGAGTCTCTCTCCGAGACAGTGCCCAGATCGTT 104581 Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 104580 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 104521 Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGC-GTTAGC---TAACCC 188 | ||||||||||||||| |||||||||||| || ||| | | || | | | ||| Sbjct 104520 TAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGTCGGCTCCCCTGTCATCAAGTCACCA 104461 Query 189 CATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTT 248 | || |||||||||||| |||||||||||| ||| |||| | ||| || ||| Sbjct 104460 ACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTT 104401 Query 249 GCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATGAG 308 || ||| |||||||||| ||||||||||| |||||||| || ||||| Sbjct 104400 GCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACC------CC 104347 Query 309 CTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCTTT 368 ||| ||| | ||| | ||||||||||||||||||| || || Sbjct 104346 CTTTGTGAGGA-----------------GGCACCCCTTCTCCCGAAGTTACGGGGCTATT 104304 Query 369 TTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCCAACCAC 426 ||||| |||||||| ||||| |||| || ||| ||||||||||||| | |||| Sbjct 104303 TTGCCGAGTTCCTTAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACCTACCCAC 104246 Score = 273 bits (302), Expect = 5e-71 Identities = 310/418 (74%), Gaps = 27/418 (6%) Strand=Plus/Plus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 |||||||||||| || || ||||||| ||||||| ||||||| ||| |||||| Sbjct 128328 GCATCTTCACAGACATGTCTATTTCACCGAGTCTCTCTCCGAGACAGTGCCCAGATCGTT 128387 Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 128388 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 128447 Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGC-GTTAGC---TAACCC 188 | ||||||||||||||| |||||||||||| || ||| | | || | | | ||| Sbjct 128448 TAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGTCGGCTCCCCTGTCATCAAGTCACCA 128507 Query 189 CATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTT 248 | || |||||||||||| |||||||||||| ||| |||| | ||| || ||| Sbjct 128508 ACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTT 128567 Query 249 GCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATGAG 308 || ||| |||||||||| ||||||||||| |||||||| || ||||| Sbjct 128568 GCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACC------CC 128621 Query 309 CTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCTTT 368 ||| ||| | ||| | ||||||||||||||||||| || || Sbjct 128622 CTTTGTGAGGA-----------------GGCACCCCTTCTCCCGAAGTTACGGGGCTATT 128664 Query 369 TTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCCAACCAC 426 ||||| |||||||| ||||| |||| || ||| ||||||||||||| | |||| Sbjct 128665 TTGCCGAGTTCCTTAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACCTACCCAC 128722 >seq37375 Length=404466 Score = 248 bits (274), Expect = 2e-63 Identities = 302/412 (73%), Gaps = 21/412 (5%) Strand=Plus/Minus Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66 ||| | |||||||||| | || ||||||||||| | ||| | |||||||||| || Sbjct 257400 TACTCCGCATCTTCACGGAGAATTCAATTTCACCGGGTCCATGTCGGAGACAGCGGGGCA 257341 Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126 ||||||| |||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct 257340 GTCGTTACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTCGCTACCTTAGGA 257281 Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAAC 186 | |||| ||||| ||||||||||||||||||||| || | ||||| || | || Sbjct 257280 CAGTTAGAGTTACTGCCGCCGTTTACCGGGGCTTCCATTCAAAGCTT----ATAAC--AC 257227 Query 187 CCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGT 246 | | ||||||| |||||||||||| |||| || |||||| || || | | Sbjct 257226 TTCTCCTTCCGACCTTCCAGCACCGGGCAGGTGTCAGACTCTATACATCGTGTTACCACT 257167 Query 247 TTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATG 306 | ||||||| ||||||||||||||||||||||| | |||||||| | | | | | Sbjct 257166 TAGCAGAGTCCTGTGTTTTTAATAAACAGTCGCTACCCCCTGGTATGTGCCGCTTTCCTA 257107 Query 307 AGCTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCT 366 | | | || || |||| ||||||||||||||||||| | | Sbjct 257106 ATCAAA---AGATAGGAGAGCACC------------CCTTCTCCCGAAGTTACGGGGTCA 257062 Query 367 TTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTAC 418 ||||||| ||||||||| | ||||||||||||||| | |||| |||||| Sbjct 257061 TTTTGCCGAGTTCCTTCGACATGGTTCTCTCAAGCGCCCTAGTATACTCTAC 257010 >seq6 Length=19356003 Score = 172 bits (190), Expect = 1e-40 Identities = 210/284 (74%), Gaps = 8/284 (3%) Strand=Plus/Plus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 |||||||||||| || || ||||||| ||||||| ||||||| ||| |||||| Sbjct 11601264 GCATCTTCACAGACATGTCTATTTCACCGAGTCTCTCTCCGAGACAGTGCCCAGATCGTT 11601323 Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132 || || ||||||| ||| ||||||||| |||||| |||||||||||||||||||| ||| Sbjct 11601324 ACACCTTTCGTGCGGGTTGGAACTTACTCGACAAAGAATTTCGCTACCTTAGGACTATTA 11601383 Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGC-GTTAGCTAACCCCAT 191 | |||||| || | ||| ||||||||||| || ||| | | || | | | ||| Sbjct 11601384 TAGTTACGACCACTGTTCACCGGGGCTTCAGTCGTCGGCTCCCCTGTCA--TCAAGTCAT 11601441 Query 192 CAA-----TTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGT 246 || || ||||| |||||| |||||||||| ||| |||| | || || | Sbjct 11601442 TAAGTTCCTTGACCTTTCGGCACTAAGCAGGCGTCAACCCCCATACTTTGTTTTACGACT 11601501 Query 247 TTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGT 290 ||||| || |||||||||| ||||||||||| | |||||| Sbjct 11601502 TTGCAAAGACCTGTGTTTTTGGTAAACAGTCGCCCGGACCTGGT 11601545 Score = 104 bits (114), Expect = 6e-20 Identities = 151/211 (72%), Gaps = 8/211 (4%) Strand=Plus/Plus Query 96 TTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATTGTTACGGCCGCCGTTTACCGG 155 |||||||||||||||||| ||||| ||||||| |||| |||||| || | ||| ||||| Sbjct 11605854 TTACCCGACAAGGAATTTTGCTACATTAGGACTATTATAGTTACGACCACTGTTCACCGG 11605913 Query 156 GGCTTCGATCAAGAGCTTCGC-GTTAGCTAACCCCATCAA-----TTAACCTTCCGGCAC 209 |||||| || ||| | | || | | | ||| || || ||||| | |||| Sbjct 11605914 GGCTTCAGTCGTCGGCTCCCCTGTCA--TCAAGTCATTAACTTCCTTGACCTTTCAGCAC 11605971 Query 210 CGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAGAGTGCTGTGTTTTTAAT 269 |||| || ||| ||| |||| | ||| || ||||| ||| |||||||||| | Sbjct 11605972 TAGGCATGCATCAGCCCCCATACTTGATCTTACGACTTTGCGGAGACCTGTGTTTTTGGT 11606031 Query 270 AAACAGTCGCAGCGGCCTGGTATCTTCGACC 300 |||||||||| | |||||| || ||||| Sbjct 11606032 AAACAGTCGCCCGGACCTGGTCACTACGACC 11606062 >seq627 Length=217819 Score = 111 bits (122), Expect = 4e-22 Identities = 117/154 (76%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66 ||| | ||||||| || | || |||||||| || | ||| ||||||| | | Sbjct 16413 TACTCCGCATCTTTACGGAGAATTCAATTTTACCGGGTCCATATCGGAGACAATGGAACA 16354 Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126 ||||||| ||||||||||||||| ||||| | | ||||||||||||||| |||||| Sbjct 16353 GTCGTTACACCATTCGTGCAGGTCACTACTTATGCAATAAGGAATTTCGCTACTTTAGGA 16294 Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTT 160 | |||| ||||| ||||| ||||||||||| || Sbjct 16293 CAGTTAGAGTTACTGCCGCTGTTTACCGGGGTTT 16260 >seq5 Length=30687117 Score = 82.4 bits (90), Expect = 2e-13 Identities = 72/90 (80%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 337 GGCGCACCTTCTCCCGAAGTTACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCT 396 ||| | ||||||||||||||||||| || ||||||| |||||||| ||||| ||| Sbjct 23611248 GGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTAGAGAGAGTTGTCT 23611189 Query 397 CAAGCGCCTTGGTATTCTCTACCCAACCAC 426 | || ||| ||||||||||||| | |||| Sbjct 23611188 CGCGCCCCTAGGTATTCTCTACCTACCCAC 23611159 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260328776000