Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq37374 342 1e-91 seq37375 273 5e-71 seq6 214 4e-53 seq627 113 1e-22 seq1 102 2e-19 seq5 73.4 8e-11 >seq37374 Length=151683 Score = 342 bits (378), Expect = 1e-91 Identities = 290/353 (82%), Gaps = 8/353 (2%) Strand=Plus/Minus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| | || | |||||||||||||| | ||||||||||||| |||||| Sbjct 104640 GCATCTTCACAGACATGTCTATTTCACCGAGTCTCTCTCCGAGACAGTGCCCAGATCGTT 104581 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 104580 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 104521 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGAT-TGCTC---TAACAG 182 ||||||||||||||||| || ||||||| || | ||| | | | || | || Sbjct 104520 TAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGTCGGCTCCCCTGTCATCAAGTCACCA 104461 Query 183 ATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTA 242 | |||| ||||||| |||| |||||||||||||| || |||||| ||||| |||||| Sbjct 104460 ACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTT 104401 Query 243 GCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCG---GCCTGTCA 299 || || ||||||||||||||||||||||||| |||||| || ||||| ||| | Sbjct 104400 GCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCTTTGT 104341 Query 300 TAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352 || |||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct 104340 GAG-GAGGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTA 104289 Score = 342 bits (378), Expect = 1e-91 Identities = 290/353 (82%), Gaps = 8/353 (2%) Strand=Plus/Plus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| | || | |||||||||||||| | ||||||||||||| |||||| Sbjct 128328 GCATCTTCACAGACATGTCTATTTCACCGAGTCTCTCTCCGAGACAGTGCCCAGATCGTT 128387 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 128388 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 128447 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGAT-TGCTC---TAACAG 182 ||||||||||||||||| || ||||||| || | ||| | | | || | || Sbjct 128448 TAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGTCGGCTCCCCTGTCATCAAGTCACCA 128507 Query 183 ATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTA 242 | |||| ||||||| |||| |||||||||||||| || |||||| ||||| |||||| Sbjct 128508 ACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTT 128567 Query 243 GCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCG---GCCTGTCA 299 || || ||||||||||||||||||||||||| |||||| || ||||| ||| | Sbjct 128568 GCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCTTTGT 128627 Query 300 TAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352 || |||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct 128628 GAG-GAGGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTA 128679 >seq37375 Length=404466 Score = 273 bits (302), Expect = 5e-71 Identities = 286/376 (76%), Gaps = 20/376 (5%) Strand=Plus/Minus Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAA 60 ||| | |||||||||| | || | ||||||||||| ||| || ||||||| | | Sbjct 257400 TACTCCGCATCTTCACGGAGAATTCAATTTCACCGGGTCCATGTCGGAGACAGCGGGGCA 257341 Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120 ||||||| || ||||||| ||||| ||||| |||||||||||||||||||||||||| Sbjct 257340 GTCGTTACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTCGCTACCTTAGGA 257281 Query 121 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAAC 180 | |||| |||||| |||||||||||| ||||||| |||| ||| | |||| Sbjct 257280 CAGTTAGAGTTACTGCCGCCGTTTACCGGGGCTTCCATTCAAAGCT--------TATAAC 257229 Query 181 AGATCCCCTT--AACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGA 238 | || |||| |||||||||||||||||||| ||||| ||||||||||| || | | Sbjct 257228 ACTTCTCCTTCCGACCTTCCAGCACCGGGCAGGTGTCAGACTCTATACATCGTGTTACCA 257169 Query 239 CTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTC 298 ||||||||| ||||||||||| |||||||||||| ||| | | ||| || | | Sbjct 257168 CTTAGCAGAGTCCTGTGTTTTTAATAAACAGTCGCTACCCCCTGGTATGTGCCGCTTTCC 257109 Query 299 ------ATAGACAG----GCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTC 348 | ||| || |||||||||||||| ||||||||||||||||||||||||||| Sbjct 257108 TAATCAAAAGATAGGAGAGCACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCGAGTTC 257049 Query 349 CTTAACAATAGTTCTC 364 ||| || |||||| Sbjct 257048 CTTCGACATGGTTCTC 257033 >seq6 Length=19356003 Score = 214 bits (236), Expect = 4e-53 Identities = 216/279 (77%), Gaps = 4/279 (1%) Strand=Plus/Plus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| | || | |||||||||||||| | ||||||||||||| |||||| Sbjct 11601264 GCATCTTCACAGACATGTCTATTTCACCGAGTCTCTCTCCGAGACAGTGCCCAGATCGTT 11601323 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 || |||||||||||||| ||||||||| |||||| |||||||||||||||||||| ||| Sbjct 11601324 ACACCTTTCGTGCGGGTTGGAACTTACTCGACAAAGAATTTCGCTACCTTAGGACTATTA 11601383 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGAT-TGCTC---TAACAG 182 |||||||| || | ||| || ||||||| ||| | ||| | | | || | | Sbjct 11601384 TAGTTACGACCACTGTTCACCGGGGCTTCAGTCGTCGGCTCCCCTGTCATCAAGTCATTA 11601443 Query 183 ATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTA 242 | |||| ||||| | |||| |||||||||| | || |||| | || || |||||| Sbjct 11601444 AGTTCCTTGACCTTTCGGCACTAAGCAGGCGTCAACCCCCATACTTTGTTTTACGACTTT 11601503 Query 243 GCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCT 281 ||| | ||||||||||||||||||||||||| || ||| Sbjct 11601504 GCAAAGACCTGTGTTTTTGGTAAACAGTCGCCCGGACCT 11601542 Score = 165 bits (182), Expect = 2e-38 Identities = 200/270 (74%), Gaps = 8/270 (3%) Strand=Plus/Plus Query 90 TTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGG 149 |||||||||||||||||| ||||| ||||||| ||||||||||| || | ||| || || Sbjct 11605854 TTACCCGACAAGGAATTTTGCTACATTAGGACTATTATAGTTACGACCACTGTTCACCGG 11605913 Query 150 GGCTTAAGTTCACTGCTTCGATTGCTCTAACAGATCC----CCTTAACCTTCCAGCACCG 205 ||||| ||| | ||| | | | || || |||| ||||| |||||| Sbjct 11605914 GGCTTCAGTCGTCGGCTCCCCTGTCATCAAGTCATTAACTTCCTTGACCTTTCAGCACTA 11605973 Query 206 GGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAGAAACCTGTGTTTTTGGTAA 265 |||| || ||||| || |||| | |||| |||||| || || ||||||||||||||||| Sbjct 11605974 GGCATGCATCAGCCCCCATACTTGATCTTACGACTTTGCGGAGACCTGTGTTTTTGGTAA 11606033 Query 266 ACAGTCGCTTGGGCCTATTCTCTGCG---GCCTGTCATAGACAGGCACCCCTTCTCCCTA 322 |||||||| || ||| || || || ||| | || |||||||||||||| | Sbjct 11606034 ACAGTCGCCCGGACCTGGTCACTACGACCCCCTTTGTGAG-GAGGCACCCCTTCTCTTGA 11606092 Query 323 AGTTACGGGGTCATTTTGCCGAGTTCCTTA 352 ||||| | || |||||||||||||||||| Sbjct 11606093 AGTTATGAGGCTATTTTGCCGAGTTCCTTA 11606122 >seq627 Length=217819 Score = 113 bits (124), Expect = 1e-22 Identities = 122/162 (75%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAA 60 ||| | ||||||| || | || | |||||| |||| ||| || |||||| || | Sbjct 16413 TACTCCGCATCTTTACGGAGAATTCAATTTTACCGGGTCCATATCGGAGACAATGGAACA 16354 Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120 ||||||| || ||||||| |||| ||||| | | ||||||||||||||| |||||| Sbjct 16353 GTCGTTACACCATTCGTGCAGGTCACTACTTATGCAATAAGGAATTTCGCTACTTTAGGA 16294 Query 121 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCAC 162 | |||| |||||| ||||| |||||| |||| || ||| || Sbjct 16293 CAGTTAGAGTTACTGCCGCTGTTTACCGGGGTTTTCGTTTAC 16252 >seq1 Length=42234885 Score = 102 bits (112), Expect = 2e-19 Identities = 106/138 (77%), Gaps = 1/138 (1%) Strand=Plus/Minus Query 212 CGTCAGCTCCTATACATCGTCTTGCGACTTAGCAGAAACCTGTGTTTTTGGTAAACAGTC 271 |||||| || ||| || ||||| |||||| | || ||| ||||||| |||| |||||| Sbjct 35021449 CGTCAGTCCCCATAAATGGTCTTACGACTTTGAGGAGACCCGTGTTTTGGGTATACAGTC 35021390 Query 272 GCTTGGGCCTATTCTCTGCGGCCTGTCATAGA-CAGGCACCCCTTCTCCCTAAGTTACGG 330 ||||| || | ||||| || || | || |||||||| ||||||| ||||||||| Sbjct 35021389 GCTTGAGCATGGTCTCTACGACCCCTTTGTGAGGAGGCACCCATTCTCCCGAAGTTACGG 35021330 Query 331 GGTCATTTTGCCGAGTTC 348 || |||||| ||||||| Sbjct 35021329 GGCTATTTTGTCGAGTTC 35021312 Score = 93.3 bits (102), Expect = 9e-17 Identities = 69/81 (85%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 44 GTTGAGACAGTGCCCAAATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGA 103 |||||||| ||| ||| ||| |||||| ||| ||| |||||| || || |||||||||| Sbjct 35021527 GTTGAGACCGTGTCCAGATCATTACGCTTTTTGTGTGGGTCGAAATTTTTCCGACAAGGA 35021468 Query 104 ATTTCGCTACCTTAGGACCGT 124 ||||||||||||||||| ||| Sbjct 35021467 ATTTCGCTACCTTAGGATCGT 35021447 >seq5 Length=30687117 Score = 73.4 bits (80), Expect = 8e-11 Identities = 45/48 (94%), Gaps = 0/48 (0%) Strand=Plus/Minus Query 305 AGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352 |||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct 23611249 AGGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTA 23611202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062002928000