Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq37374 174 3e-41 seq37375 152 1e-34 seq6 125 1e-26 seq8 77.0 6e-12 >seq37374 Length=151683 Score = 174 bits (192), Expect = 3e-41 Identities = 178/230 (77%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170 |||||||| |||| | |||||| ||||||| ||||||| || ||||||||||| Sbjct 104829 GGGACAGTCTCAGGTAGACAGTTTCTATGGGGCGTAGGCCTCCCCAAAGGTAACGGAGGC 104888 Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCAC-AGTGCAAAGGCAAAAGGGT 229 | ||||| | |||| | || ||| | || | | |||||||||||| ||||| Sbjct 104889 GTGCAAAGGTTTCCTCGGGCCAGACGGAGATTG-GCCCTCGAGTGCAAAGGCAGAAGGGA 104947 Query 230 GTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGG 289 | |||||||| | |||| | ||| |||||||||||||||||| |||| ||||||| ||| Sbjct 104948 GCTTGACTGCAAGACCCACCCGTCGAGCAGGGACGAAAGTCGGCCTTAGTGATCCGACGG 105007 Query 290 TGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 ||| || ||||| ||||||||||| ||||||||||| ||| || |||||| Sbjct 105008 TGCCGAGTGGAAGGGCCGTCGCTCAACGGATAAAAGTTACTCTAGGGATA 105057 Score = 174 bits (192), Expect = 3e-41 Identities = 178/230 (77%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170 |||||||| |||| | |||||| ||||||| ||||||| || ||||||||||| Sbjct 128139 GGGACAGTCTCAGGTAGACAGTTTCTATGGGGCGTAGGCCTCCCCAAAGGTAACGGAGGC 128080 Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCAC-AGTGCAAAGGCAAAAGGGT 229 | ||||| | |||| | || ||| | || | | |||||||||||| ||||| Sbjct 128079 GTGCAAAGGTTTCCTCGGGCCAGACGGAGATTG-GCCCTCGAGTGCAAAGGCAGAAGGGA 128021 Query 230 GTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGG 289 | |||||||| | |||| | ||| |||||||||||||||||| |||| ||||||| ||| Sbjct 128020 GCTTGACTGCAAGACCCACCCGTCGAGCAGGGACGAAAGTCGGCCTTAGTGATCCGACGG 127961 Query 290 TGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 ||| || ||||| ||||||||||| ||||||||||| ||| || |||||| Sbjct 127960 TGCCGAGTGGAAGGGCCGTCGCTCAACGGATAAAAGTTACTCTAGGGATA 127911 >seq37375 Length=404466 Score = 152 bits (168), Expect = 1e-34 Identities = 173/231 (75%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 110 CGGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGG 169 ||||||| || || ||| ||||| ||||||||| |||||| ||||||||||||||| Sbjct 257569 CGGGACACTGCGAGGTGGGTAGTTTATCTGGGGCGGATGCCTCCTAAAGAGTAACGGAGG 257628 Query 170 CGCCCAAAGATACCCTCA-GCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGG 228 | | ||| || |||| ||| ||| | || || | || || | ||| Sbjct 257629 TGTGCGAAGGTAGGCTCAAGCTAAGATTCTGCTCGTGAGC-----GTAATGGTATAAGCC 257683 Query 229 TGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCG 288 || ||||||| | |||| | ||| |||||||||||||||||| |||| ||||||| || Sbjct 257684 TGCCTGACTGCAAGACCCACCCGTCGAGCAGGGACGAAAGTCGGCCTTAGTGATCCGACG 257743 Query 289 GTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 |||| || ||||| ||||||||||| ||||||||||| ||| || |||||| Sbjct 257744 GTGCCGAGTGGAAGGGCCGTCGCTCAACGGATAAAAGTTACTCTAGGGATA 257794 >seq6 Length=19356003 Score = 125 bits (138), Expect = 1e-26 Identities = 105/129 (81%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 211 AGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTC 270 |||||||||||| ||||| | |||||||| | |||| | || | |||||||||||||| Sbjct 11600976 AGTGCAAAGGCATAAGGGAGCTTGACTGCAAGACCCACCCATCGAACAGGGACGAAAGTC 11600917 Query 271 GGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACC 330 | |||| ||||||| |||||| || ||||| | ||||||||| ||||||||||| ||| Sbjct 11600916 GACCTTAGTGATCCGACGGTGCCGAGTGGAAGGACCGTCGCTCAACGGATAAAAGTTACT 11600857 Query 331 CTGGGGATA 339 || || ||| Sbjct 11600856 CTAGGAATA 11600848 >seq8 Length=30791815 Score = 77.0 bits (84), Expect = 6e-12 Identities = 92/124 (74%), Gaps = 1/124 (1%) Strand=Plus/Plus Query 217 AAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTT 276 |||||| || | |||| ||| | | |||| | ||| || |||||| ||||| ||| Sbjct 27223895 AAGGCAGAAAAGAGTTTAACTACAAGACCCACTCGTCGAGTAGGGACAGAAGTCAACCTT 27223954 Query 277 AATGATCCGGCGGTGCTGAATGGAACGGC-CGTCGCTCGACGGATAAAAGCTACCCTGGG 335 | ||||| | || || ||||| || || | |||||| ||||||||||| || |||||| Sbjct 27223955 ATTGATCTGACGATGTAGAATGAAAGGGGTCATCGCTCAACGGATAAAAGTTATCCTGGG 27224014 Query 336 GATA 339 |||| Sbjct 27224015 GATA 27224018 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982032828000