Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq37374 221 3e-55 seq37375 206 6e-51 seq2 138 2e-30 seq269 122 2e-25 seq1 120 7e-25 seq3 93.3 9e-17 >seq37374 Length=151683 Score = 221 bits (244), Expect = 3e-55 Identities = 239/310 (77%), Gaps = 20/310 (6%) Strand=Plus/Minus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 |||||||||||| || |||||||||||||||||| || |||||||||||||||||| Sbjct 99041 CACGCGGCATTG-CTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTC 98983 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148 |||||||||||||| |||||||||||| |||||||| |||||||||||||| |||||| | Sbjct 98982 CCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCT 98923 Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGAC-CTAGGCTCA 207 || |||| |||||||||| ||| ||| ||||||||||||||||||| ||| | || | | Sbjct 98922 ACTGATCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGACGCGAGCCCCT 98863 Query 208 TCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTTTCTCCCGTAGGACGTATGCGGTATTAG 267 || || ||| || ||| |||| | | | | | || | |||||||| Sbjct 98862 CCT-----CG---GGC-----GGATTCCTCCTTTTGCTCCTCAG-CCTACGGGGTATTAG 98817 Query 268 CGTCCGTTTCCGAACGTTATCCCCCACTACCA--GGCAGATTCCTAGGCATTACTCACCC 325 | |||||||| ||| | ||| || ||| || || ||| || || |||||||||| Sbjct 98816 CAGCCGTTTCCAGCTGTTGTTCCC--CTCCCAAGGGTAGGTTCTTACGCGTTACTCACCC 98759 Query 326 GTCCGCCGCT 335 ||||||| || Sbjct 98758 GTCCGCCACT 98749 Score = 221 bits (244), Expect = 3e-55 Identities = 239/310 (77%), Gaps = 20/310 (6%) Strand=Plus/Plus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 |||||||||||| || |||||||||||||||||| || |||||||||||||||||| Sbjct 133927 CACGCGGCATTG-CTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTC 133985 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148 |||||||||||||| |||||||||||| |||||||| |||||||||||||| |||||| | Sbjct 133986 CCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCT 134045 Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGAC-CTAGGCTCA 207 || |||| |||||||||| ||| ||| ||||||||||||||||||| ||| | || | | Sbjct 134046 ACTGATCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGACGCGAGCCCCT 134105 Query 208 TCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTTTCTCCCGTAGGACGTATGCGGTATTAG 267 || || ||| || ||| |||| | | | | | || | |||||||| Sbjct 134106 CCT-----CG---GGC-----GGATTCCTCCTTTTGCTCCTCAG-CCTACGGGGTATTAG 134151 Query 268 CGTCCGTTTCCGAACGTTATCCCCCACTACCA--GGCAGATTCCTAGGCATTACTCACCC 325 | |||||||| ||| | ||| || ||| || || ||| || || |||||||||| Sbjct 134152 CAGCCGTTTCCAGCTGTTGTTCCC--CTCCCAAGGGTAGGTTCTTACGCGTTACTCACCC 134209 Query 326 GTCCGCCGCT 335 ||||||| || Sbjct 134210 GTCCGCCACT 134219 >seq37375 Length=404466 Score = 206 bits (228), Expect = 6e-51 Identities = 180/220 (82%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 1 CTTTACAATCCGAA--GACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGC 58 |||||||| | | | | ||||||| ||| |||||| |||| ||||||| ||||||||| Sbjct 127501 CTTTACAAGCGGCATTGCCCTTCTT-CACTCACGCGATATTG-CTGGATCGGGCTTTCGC 127558 Query 59 CCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCC 118 ||||||||||| |||||||||||||||| ||||| |||||| || |||||||||||| || Sbjct 127559 CCATTGTCCAAGATTCCCCACTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCC 127618 Query 119 AGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCT 178 |||||| |||||||||| ||||||| || | ||| | | |||||| |||| |||||| Sbjct 127619 AGTGTGGCTGATCATCCGAAAAGACCAGCTAAGCATCATTGGCTTGGTCAGCCTTTACCT 127678 Query 179 CACCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGC 218 |||||||| ||||| | || ||||||||| | ||||| Sbjct 127679 GACCAACTACCTAATACTACGCAGGCTCATCAAACAGCGC 127718 >seq2 Length=35625406 Score = 138 bits (152), Expect = 2e-30 Identities = 111/134 (83%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 47 TCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCG 106 |||||||||||||||||| || ||||||||||||| ||||||||||||||||| || Sbjct 30528507 TCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTATCTCCCGTAGGAGTCTGGGCCA 30528566 Query 107 TGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGT 166 ||||| | | |||||||| || ||||||||||| ||||| ||| ||| ||||||| || Sbjct 30528567 TGTCTTAATCCCAGTGTGGCTAATCATCCTCTCGGACCAACTACTCATCATCGCCTTAGT 30528626 Query 167 GAGCCATTACCTCA 180 ||| ||| ||||| Sbjct 30528627 AAGCTATTGCCTCA 30528640 Score = 109 bits (120), Expect = 1e-21 Identities = 121/159 (76%), Gaps = 2/159 (1%) Strand=Plus/Minus Query 35 GCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAG 94 |||||| || |||||| ||| || |||| | || | | ||| || ||||| ||| Sbjct 25244573 GCATTG-CTTCATCAGGTTTT-GCTCATTATGAAAAAATTTCCATTGAAACCTCCTTTAG 25244516 Query 95 GAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGAT 154 ||||||| |||||||||||||||||||||||||||||||||| |||| ||| ||| Sbjct 25244515 GAGTCTGAGTTGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCGAACCATTTATTGAT 25244456 Query 155 CGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAAT 193 | || ||| | || ||| | |||||||||||||||| Sbjct 25244455 CATCATTTTGATAAGTTATTGCTTCACCAACTAGCTAAT 25244417 Score = 93.3 bits (102), Expect = 9e-17 Identities = 84/107 (79%), Gaps = 8/107 (7%) Strand=Plus/Plus Query 92 TAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACG 151 ||||||||| | || ||||||||| |||||||| ||||||||| |||||||||| ||| Sbjct 34664617 TAGGAGTCTAGGCCATGTCTCAGTCCCAGTGTGGCTGATCATCTTCTCAGACCAACTACT 34664676 Query 152 GATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGAC 198 ||| |||| || ||| | ||||||||||||||||| ||| Sbjct 34664677 GAT--------TGGTAAGTTATTGCTTCACCAACTAGCTAATCAGAC 34664715 >seq269 Length=1102413 Score = 122 bits (134), Expect = 2e-25 Identities = 152/203 (75%), Gaps = 4/203 (2%) Strand=Plus/Minus Query 17 CCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCC 76 ||||||| ||| | ||| |||| |||||| || ||||| ||||||||||| |||| | Sbjct 1012353 CCTTCTT-CACTCCCGCAATATTGT-TGGATCGGGTTTTCGTCCATTGTCCAAGATTCTC 1012296 Query 77 CACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGT-TCCAGTGTGACTGATCATCC 135 || ||||||| || || ||| || | | |||| || || ||||||||| ||||||||| Sbjct 1012295 CAATGCTGCC-CCTGTGGGAATCCGAGCTGTGTTTCCGTCTCCAGTGTGGTTGATCATCC 1012237 Query 136 TCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCC 195 |||| || || | || | | ||| || |||| |||||| |||||||| ||||| Sbjct 1012236 GAAAAGACTAGCTAAGCATTATTGGCTTAGTCAGCCTTTACCTGACCAACTACCTAATAT 1012177 Query 196 GACCTAGGCTCATCTGATAGCGC 218 | |||||||||| ||||||| Sbjct 1012176 TGCGTAGGCTCATCAAATAGCGC 1012154 >seq1 Length=42234885 Score = 120 bits (132), Expect = 7e-25 Identities = 130/170 (76%), Gaps = 2/170 (1%) Strand=Plus/Plus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 || ||| ||||| || |||||||||| |||||| | |||| |||||| |||| Sbjct 33101626 CATGCGACATTG-CTTTATCAGGCTTTTATCCATTGCGGGAAATTCTCCACTGTTGCCGT 33101684 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148 | ||||||| ||| | |||||||| | ||| | || || ||||| ||||| |||||| | Sbjct 33101685 CTATAGGAGTTTGGGC-GTGTCTCAATCCCATTATGGCTAATCATTCTCTCGGACCAGCT 33101743 Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGAC 198 || |||| || ||||||| || ||| |||||||||||||||||| ||| Sbjct 33101744 ACTGATCATCACCTTGGTCGGCTTTTATCTCACCAACTAGCTAATCAGAC 33101793 >seq3 Length=41204908 Score = 93.3 bits (102), Expect = 9e-17 Identities = 84/107 (79%), Gaps = 8/107 (7%) Strand=Plus/Minus Query 92 TAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACG 151 ||||||||| | || ||||||||| |||||||| ||||||||| |||||||||| ||| Sbjct 29356447 TAGGAGTCTAGGCCATGTCTCAGTCCCAGTGTGGCTGATCATCTTCTCAGACCAACTACT 29356388 Query 152 GATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGAC 198 ||| |||| || ||| | ||||||||||||||||| ||| Sbjct 29356387 GAT--------TGGTAAGTTATTGCTTCACCAACTAGCTAATCAGAC 29356349 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071599340000