Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq37374 217 4e-54 seq3 134 3e-29 seq37375 102 2e-19 seq8 89.7 1e-15 seq9 75.2 3e-11 >seq37374 Length=151683 Score = 217 bits (240), Expect = 4e-54 Identities = 313/424 (74%), Gaps = 23/424 (5%) Strand=Plus/Minus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||| |||| ||||| | || |||||| ||||||||||| |||||| ||||| | Sbjct 103371 CCACAACTCAT-CCGCTGA-TTCTTCAACATCAGTCGGTTCGGACCTCCACTTAGT-TTC 103315 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 |||||| | |||| |||| ||| ||||||||| ||| | |||||||| | | ||| Sbjct 103314 ACCCAAGC-TTCATCCTGGTCAT-GGATAGATCACCCAG-GTTCGGGTCCA-TAAGCAGT 103259 Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCT--ATTCGGTTAAGCTT 186 ||| | |||||| ||||||||| |||||||||| |||| | ||| |||| | Sbjct 103258 GAC-AATTGCCCTATGAAGACTCGC-TTTCGCTACGGCTCCGGTGGTTTCCCTTAA-CCA 103202 Query 187 TGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTC-----ACCCAAC 241 ||||||| || |||||| | | |||| | ||| ||| |||| ||| ||| || Sbjct 103201 AGCCACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCAGAGTACCGGAC 103142 Query 242 AAAG--TGG---GCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCC 296 || | | ||||||||||||| || |||||||||| | ||||||||||||||| Sbjct 103141 TGAGCCTAGCCTCCTCCCACTGCTTGGGAGCTTACGGTTTCATGTTCTATTTCACTCCCC 103082 Query 297 TCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAG 356 | |||||||||||| || |||||||||||||||| |||||||||||||| ||| || Sbjct 103081 GAT-GGGGGTTCTTTTCACCCTTCCCTCACGGTACTACTTCACTATCGGTCACCCAGGAG 103023 Query 357 TATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTA 416 |||||||||||| | | |||||| | ||||| || || | ||||| || | ||| Sbjct 103022 TATTTAGCCTTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCACGTGCCCCATGCTA 102963 Query 417 CTCG 420 |||| Sbjct 102962 CTCG 102959 Score = 217 bits (240), Expect = 4e-54 Identities = 313/424 (74%), Gaps = 23/424 (5%) Strand=Plus/Plus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||| |||| ||||| | || |||||| ||||||||||| |||||| ||||| | Sbjct 129597 CCACAACTCAT-CCGCTGA-TTCTTCAACATCAGTCGGTTCGGACCTCCACTTAGT-TTC 129653 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 |||||| | |||| |||| ||| ||||||||| ||| | |||||||| | | ||| Sbjct 129654 ACCCAAGC-TTCATCCTGGTCAT-GGATAGATCACCCAG-GTTCGGGTCCA-TAAGCAGT 129709 Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCT--ATTCGGTTAAGCTT 186 ||| | |||||| ||||||||| |||||||||| |||| | ||| |||| | Sbjct 129710 GAC-AATTGCCCTATGAAGACTCGC-TTTCGCTACGGCTCCGGTGGTTTCCCTTAA-CCA 129766 Query 187 TGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTC-----ACCCAAC 241 ||||||| || |||||| | | |||| | ||| ||| |||| ||| ||| || Sbjct 129767 AGCCACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCAGAGTACCGGAC 129826 Query 242 AAAG--TGG---GCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCC 296 || | | ||||||||||||| || |||||||||| | ||||||||||||||| Sbjct 129827 TGAGCCTAGCCTCCTCCCACTGCTTGGGAGCTTACGGTTTCATGTTCTATTTCACTCCCC 129886 Query 297 TCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAG 356 | |||||||||||| || |||||||||||||||| |||||||||||||| ||| || Sbjct 129887 GAT-GGGGGTTCTTTTCACCCTTCCCTCACGGTACTACTTCACTATCGGTCACCCAGGAG 129945 Query 357 TATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTA 416 |||||||||||| | | |||||| | ||||| || || | ||||| || | ||| Sbjct 129946 TATTTAGCCTTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCACGTGCCCCATGCTA 130005 Query 417 CTCG 420 |||| Sbjct 130006 CTCG 130009 >seq3 Length=41204908 Score = 134 bits (148), Expect = 3e-29 Identities = 133/171 (78%), Gaps = 2/171 (1%) Strand=Plus/Minus Query 250 CTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCT 309 ||||||||||||| || || ||||||| | | ||||||||||||| | |||||||| Sbjct 40510065 CTCCCACTGCTTGGGAGCTTATGGTTTCATGTTATATTTCACTCCCCGAT--GGGGTTCT 40510008 Query 310 TTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGG 369 |||| || |||||||| ||||||| |||||||||| ||| ||| |||||||||||||| Sbjct 40510007 TTTCACCCTTCCCTCATGGTACTACTTCACTATCGCTCACCCAGGAGTATTTAGCCTTGC 40509948 Query 370 AGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420 | | |||||| | ||||| || | || | | ||| || | ||||||| Sbjct 40509947 AAGGTGGTCCTTGCTAATTCACACGAGATTCCACATGCCCCATGCTACTCG 40509897 >seq37375 Length=404466 Score = 102 bits (112), Expect = 2e-19 Identities = 102/130 (78%), Gaps = 3/130 (2%) Strand=Plus/Minus Query 255 ACTGCTTGTACGCATACGGTTTCAGGATCT--ATTTCACTCCCCTCTCCGGGGTTCTTTT 312 |||| |||| ||||| | | ||||| ||| ||| ||||||| | |||||||||| Sbjct 255729 ACTGATTGTTCGCATCGGATCTCAGGTTCTCTATTGCACTCCC-TAAATAGGGTTCTTTT 255671 Query 313 CGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGG 372 | |||||||||||||||||| || | |||||||||| | || | || |||| ||| |||| Sbjct 255670 CACCTTTCCCTCACGGTACTTGTACGCTATCGGTCATTGAGGAATACTTAGGCTTAGAGG 255611 Query 373 ATGGTCCCCC 382 ||||||||| Sbjct 255610 GTGGTCCCCC 255601 >seq8 Length=30791815 Score = 89.7 bits (98), Expect = 1e-15 Identities = 99/130 (76%), Gaps = 3/130 (2%) Strand=Plus/Minus Query 255 ACTGCTTGTACGCATACGGTTTCAGGATCT--ATTTCACTCCCCTCTCCGGGGTTCTTTT 312 |||| |||| ||||| | | ||||| ||| ||| ||||||| | |||||||||| Sbjct 24031510 ACTGATTGTTCGCATCGGATCTCAGGTTCTTTATTGCACTCCC-TAAATAGGGTTCTTTT 24031452 Query 313 CGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGG 372 | ||||||||| || ||||| || | |||||||||| | || | || |||| ||| ||| Sbjct 24031451 CACCTTTCCCTTACAGTACTTGTACGCTATCGGTCATTGAGGAATACTTAGGCTTATAGG 24031392 Query 373 ATGGTCCCCC 382 ||||||||| Sbjct 24031391 GTGGTCCCCC 24031382 >seq9 Length=31747250 Score = 75.2 bits (82), Expect = 3e-11 Identities = 56/66 (85%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 305 GTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGC 364 || |||||| ||||||||| ||||||| |||||||||||||| || |||||||||| Sbjct 25146595 GTCCTTTTCATCTTTCCCTCGCGGTACTTGTTCACTATCGGTCTCTCGCCAGTATTTAGC 25146536 Query 365 CTTGGA 370 |||||| Sbjct 25146535 CTTGGA 25146530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241135952000