Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq37374 215 1e-53 seq37375 136 8e-30 seq1 122 2e-25 seq2 113 9e-23 seq3 87.8 4e-15 >seq37374 Length=151683 Score = 215 bits (238), Expect = 1e-53 Identities = 232/305 (76%), Gaps = 18/305 (6%) Strand=Plus/Minus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||| | ||||| |||| ||||||| | || || ||||||||||||||||||||| Sbjct 99036 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAG 98977 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||||||||||||||||| |||||| | ||| |||||| | || ||||| ||| Sbjct 98976 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGAT 98917 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 | ||| |||||| |||||| ||||||||||| |||||| | ||||||||| || | Sbjct 98916 CATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGACGCGAGCCCCTCCTCGG 98857 Query 181 GC-GATAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTT 239 || ||| || || ||| ||||| | | || | ||||||||| Sbjct 98856 GCGGATTCCTCCTT------------TTGC--TCCTCAGCC--TACGGGGTATTAGCAGC 98813 Query 240 CGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCG 299 |||||||| ||| |||| ||| || || ||||| || ||| |||||||||||||||| Sbjct 98812 CGTTTCCAGCTGTTGTTCCCCTCCCAAGGGTAGGTT-CTTACGCGTTACTCACCCGTCCG 98754 Query 300 CCACT 304 ||||| Sbjct 98753 CCACT 98749 Score = 215 bits (238), Expect = 1e-53 Identities = 232/305 (76%), Gaps = 18/305 (6%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||| | ||||| |||| ||||||| | || || ||||||||||||||||||||| Sbjct 133932 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAG 133991 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||||||||||||||||| |||||| | ||| |||||| | || ||||| ||| Sbjct 133992 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGAT 134051 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 | ||| |||||| |||||| ||||||||||| |||||| | ||||||||| || | Sbjct 134052 CATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGACGCGAGCCCCTCCTCGG 134111 Query 181 GC-GATAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTT 239 || ||| || || ||| ||||| | | || | ||||||||| Sbjct 134112 GCGGATTCCTCCTT------------TTGC--TCCTCAGCC--TACGGGGTATTAGCAGC 134155 Query 240 CGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCG 299 |||||||| ||| |||| ||| || || ||||| || ||| |||||||||||||||| Sbjct 134156 CGTTTCCAGCTGTTGTTCCCCTCCCAAGGGTAGGTT-CTTACGCGTTACTCACCCGTCCG 134214 Query 300 CCACT 304 ||||| Sbjct 134215 CCACT 134219 >seq37375 Length=404466 Score = 136 bits (150), Expect = 8e-30 Identities = 122/153 (80%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66 |||| ||| || |||| |||||||| ||| || ||||||||||||| ||||| |||||| Sbjct 127541 GCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCACTGCTGCCCCCCGTGGGAGTCC 127600 Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126 ||||||||||||||||||| |||||| | ||| || || || |||| ||| | || Sbjct 127601 GGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCGAAAAGACCAGCTAAGCATCATTGG 127660 Query 127 CTTGGTGGGCTATTATCTCACCAACTACCTAAT 159 |||||| || ||| || |||||||||||||| Sbjct 127661 CTTGGTCAGCCTTTACCTGACCAACTACCTAAT 127693 >seq1 Length=42234885 Score = 122 bits (134), Expect = 2e-25 Identities = 128/167 (77%), Gaps = 1/167 (1%) Strand=Plus/Plus Query 12 ATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCC 71 |||||| ||| |||||| | | || | |||||| |||| | ||||||| ||||| Sbjct 33101642 ATCAGGCTTTTATCCATTGCGGGAAATTCTCCACTGTTGCCGTCTATAGGAGTTTGGGC- 33101700 Query 72 GTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGG 131 |||||||| ||||| | |||| ||| ||||| | || ||||| |||| || ||||| Sbjct 33101701 GTGTCTCAATCCCATTATGGCTAATCATTCTCTCGGACCAGCTACTGATCATCACCTTGG 33101760 Query 132 TGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTT 178 | |||| ||||||||||||||| |||||| | | ||||||| ||||| Sbjct 33101761 TCGGCTTTTATCTCACCAACTAGCTAATCAGACACGAGCCCCTCTTT 33101807 >seq2 Length=35625406 Score = 113 bits (124), Expect = 9e-23 Identities = 123/163 (75%), Gaps = 4/163 (2%) Strand=Plus/Plus Query 13 TCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCG 72 ||||| |||| ||||||| | || || |||||||||| |||||||||||||||||||| Sbjct 30528507 TCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTATCTCCCGTAGGAGTCTGGGCCA 30528566 Query 73 TGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGT 132 ||||| | ||||| |||||| ||| |||||| | || |||| ||| ||| ||| || Sbjct 30528567 TGTCTTAATCCCAGTGTGGCTAATCATCCTCTCGGACCAACTACTCATCATCGCCTTAGT 30528626 Query 133 GGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATC 175 |||||| ||| | || ||||| | | ||||||| || Sbjct 30528627 AAGCTATTGCCTC----AATAGTTAATCAGACACGAGCCCCTC 30528665 Score = 87.8 bits (96), Expect = 4e-15 Identities = 169/248 (68%), Gaps = 26/248 (10%) Strand=Plus/Plus Query 58 TAGGAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACC 117 ||||||||| |||| ||||||||||||| |||||| | ||| | |||||| || |||| Sbjct 34664617 TAGGAGTCTAGGCCATGTCTCAGTCCCAGTGTGGCTGATCATCTTCTCAGACCAACTACT 34664676 Query 118 GATCGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGC-CCATCT 176 || ||||| | |||| |||||||||| |||||| | ||||||| || || Sbjct 34664677 GA--------TTGGTAAGTTATTGCTTCACCAACTAGCTAATCAGACGCGAGCTCCTCCT 34664728 Query 177 TTCAGCGATAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGC 236 | | ||| || || ||| ||||| | ||| | ||||||||| Sbjct 34664729 TGGACGGATTCCTCCTT------------TTGC--TCCTC--AGCTTACGGGGTATTAGC 34664772 Query 237 GTTCGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGT 296 ||||||||| ||| || | ||| || | ||||| | ||| ||||||||||||| Sbjct 34664773 AATCGTTTCCAGCTGTTGTTTCCCTCCCAAGGATAGGTT-TTAACGCGTTACTCACCCGT 34664831 Query 297 CCGCCACT 304 |||||| Sbjct 34664832 TTGCCACT 34664839 >seq3 Length=41204908 Score = 87.8 bits (96), Expect = 4e-15 Identities = 169/248 (68%), Gaps = 26/248 (10%) Strand=Plus/Minus Query 58 TAGGAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACC 117 ||||||||| |||| ||||||||||||| |||||| | ||| | |||||| || |||| Sbjct 29356447 TAGGAGTCTAGGCCATGTCTCAGTCCCAGTGTGGCTGATCATCTTCTCAGACCAACTACT 29356388 Query 118 GATCGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGC-CCATCT 176 || ||||| | |||| |||||||||| |||||| | ||||||| || || Sbjct 29356387 GA--------TTGGTAAGTTATTGCTTCACCAACTAGCTAATCAGACGCGAGCTCCTCCT 29356336 Query 177 TTCAGCGATAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGC 236 | | ||| || || ||| ||||| | ||| | ||||||||| Sbjct 29356335 TGGACGGATTCCTCCTT------------TTGC--TCCTC--AGCTTACGGGGTATTAGC 29356292 Query 237 GTTCGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGT 296 ||||||||| ||| || | ||| || | ||||| | ||| ||||||||||||| Sbjct 29356291 AATCGTTTCCAGCTGTTGTTTCCCTCCCAAGGATAGGTT-TTAACGCGTTACTCACCCGT 29356233 Query 297 CCGCCACT 304 |||||| Sbjct 29356232 TTGCCACT 29356225 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 998026848000