Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq37374 226 7e-57 seq37375 167 5e-39 seq6 147 5e-33 seq9 118 2e-24 seq4 105 2e-20 >seq37374 Length=151683 Score = 226 bits (250), Expect = 7e-57 Identities = 303/410 (74%), Gaps = 20/410 (5%) Strand=Plus/Minus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 ||||||||||| ||||||| |||||| || ||||||||| | ||| ||| | | Sbjct 103987 CGACTACGCCTTTCGGCCTGATCTTAGGCCCTGACTCACCCTCCGTGGACGAACCTTGCG 103928 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACC--CGTCACACGCTACTCATGCC 118 ||||||||||| | ||| | | |||||| |||| ||| || |||||| ||| Sbjct 103927 GAGGAACCCTTGGGTTTTCGAGGCATTGGATTCTCACCAACGTTTG-CGTTACTCAAGCC 103869 Query 119 TGCATTCTCACT--CGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCACTGACA 176 ||||||| || ||| || |||| ||| || | ||| |||| || || | Sbjct 103868 GACATTCTCGCTTCCGCTTCG--TCCAGCACTGC-TCGCGCGGGTCCTTCCCC-CTAAGG 103813 Query 177 CG--ACGCTCCCCTACCCAACCAC----ACAGGTTGCCACAGCTTCGGCGGATAACTTAA 230 || ||||||||||||| | || ||| | ||||||||||||| ||| |||| Sbjct 103812 CGGAACGCTCCCCTACCGATTCATTTTGACA---TCCCACAGCTTCGGCAGATCGCTTA- 103757 Query 231 GCCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAA 290 |||||| | ||| ||||||| | | || || |||||||||||||||||||||||||| Sbjct 103756 GCCCCGTT-CATCTTCGGCGCAAGAGCGCTCGATCAGTGAGCTATTACGCACTCTTTCAA 103698 Query 291 GGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACT 350 || |||||||||| | || |||||||||||||||| ||| | | || |||||| |||| Sbjct 103697 GGGTGGCTGCTTCTAGGCAAACCTCCTGGTTGTCTCTGCACCCCTACCTCCTTTATCACT 103638 Query 351 GAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTCG 400 ||| || |||||||||||||||| ||||| ||||||||||||||||| Sbjct 103637 GAGCGGTCATTTAGGGGCCTTAGCTGGTGATCCGGGCTGTTTCCCTCTCG 103588 Score = 226 bits (250), Expect = 7e-57 Identities = 303/410 (74%), Gaps = 20/410 (5%) Strand=Plus/Plus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 ||||||||||| ||||||| |||||| || ||||||||| | ||| ||| | | Sbjct 128981 CGACTACGCCTTTCGGCCTGATCTTAGGCCCTGACTCACCCTCCGTGGACGAACCTTGCG 129040 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACC--CGTCACACGCTACTCATGCC 118 ||||||||||| | ||| | | |||||| |||| ||| || |||||| ||| Sbjct 129041 GAGGAACCCTTGGGTTTTCGAGGCATTGGATTCTCACCAACGTTTG-CGTTACTCAAGCC 129099 Query 119 TGCATTCTCACT--CGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCACTGACA 176 ||||||| || ||| || |||| ||| || | ||| |||| || || | Sbjct 129100 GACATTCTCGCTTCCGCTTCG--TCCAGCACTGC-TCGCGCGGGTCCTTCCCC-CTAAGG 129155 Query 177 CG--ACGCTCCCCTACCCAACCAC----ACAGGTTGCCACAGCTTCGGCGGATAACTTAA 230 || ||||||||||||| | || ||| | ||||||||||||| ||| |||| Sbjct 129156 CGGAACGCTCCCCTACCGATTCATTTTGACA---TCCCACAGCTTCGGCAGATCGCTTA- 129211 Query 231 GCCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAA 290 |||||| | ||| ||||||| | | || || |||||||||||||||||||||||||| Sbjct 129212 GCCCCGTT-CATCTTCGGCGCAAGAGCGCTCGATCAGTGAGCTATTACGCACTCTTTCAA 129270 Query 291 GGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACT 350 || |||||||||| | || |||||||||||||||| ||| | | || |||||| |||| Sbjct 129271 GGGTGGCTGCTTCTAGGCAAACCTCCTGGTTGTCTCTGCACCCCTACCTCCTTTATCACT 129330 Query 351 GAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTCG 400 ||| || |||||||||||||||| ||||| ||||||||||||||||| Sbjct 129331 GAGCGGTCATTTAGGGGCCTTAGCTGGTGATCCGGGCTGTTTCCCTCTCG 129380 >seq37375 Length=404466 Score = 167 bits (184), Expect = 5e-39 Identities = 153/192 (80%), Gaps = 6/192 (3%) Strand=Plus/Minus Query 212 GCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGC---GGAATCACTTGACCAGT 268 ||||||| | || |||| ||||| | |||||| |||| || ||| || ||||||| Sbjct 256383 GCTTCGGTGAATCACTTGAGCCCTGATACATTTTCGGTGCCATGGAG---CTAGACCAGT 256327 Query 269 GAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACG 328 |||||||||||| |||| ||||||||||||||||||||| |||||||||||||| || Sbjct 256326 GAGCTATTACGCTTTCTTCAAAGGATGGCTGCTTCCAAGCCCACCTCCTGGTTGTCATCG 256267 Query 329 CAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCT 388 | ||| |||||| ||||| ||| | ||||||| ||||||| | |||||||||| Sbjct 256266 CTCGATCACTTCCTTTTCCACTAAGTGATTGCTTAGGGACCTTAGCGTACGATCTGGGCT 256207 Query 389 GTTTCCCTCTCG 400 |||||||||||| Sbjct 256206 GTTTCCCTCTCG 256195 >seq6 Length=19356003 Score = 147 bits (162), Expect = 5e-33 Identities = 286/411 (70%), Gaps = 26/411 (6%) Strand=Plus/Plus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 ||| || |||| ||| ||| |||||| |||||||||||| | ||| ||| | | Sbjct 11606412 CGATTATGCCTTTCGACCTAATCTTAGGTCCCGACTCACCCTCAGAGGACGAACCTTGCA 11606471 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACA----CGCTACTCATG 116 ||||||||||| | ||| | ||||| |||| ||| || |||||| | Sbjct 11606472 GAGGAACCCTTGGGTTTTCGAGACATTAGATTCTCACCA---ACATTTGCGTTACTCAAG 11606528 Query 117 CCTGCATTCTCACT--CGCATCAACTCCACCACACAG-TCACCCGGCAGCTTCACCACTG 173 || ||||||| || ||| || | || |||| | || | ||| |||| | || Sbjct 11606529 CCGACATTCTCGCTTCCGCTTCG--TTCA--ACACTGCTCGCGCGGGTCCTTCTTC-CTA 11606583 Query 174 ACACG--ACGCTCCCCTACCCAACCAC----ACAGGTTGCCACAGCTTCGGCGGATAACT 227 | || ||||||||||||| | || ||| | ||||||||||||| ||| | Sbjct 11606584 AGGCGGAACGCTCCCCTACCGATTCATTTTGACA---TCCCACAGCTTCGGCAGATCGTT 11606640 Query 228 TAAGCCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTT 287 || ||||| | ||| |||||| | | | || ||||||||||||||||||||||| Sbjct 11606641 TA-GCCCCATT-CATCTTCGGCGTAAGAGCGCACGATCAGTGAGCTATTACGCACTCTTT 11606698 Query 288 CAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCC 347 ||||| ||||||||| | || |||||||||||||||| ||| | | || |||||| | Sbjct 11606699 CAAGGGTGGCTGCTTTTAGGCAAACCTCCTGGTTGTCTCTGCACCCCTACCTCCTTTATC 11606758 Query 348 ACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCT 398 ||| || || ||||||||||||| || || || | ||||||||||| Sbjct 11606759 ACTAAGCAGTCATTTAGGGGCCTTAGATGGTGTTCCATGTTGTTTCCCTCT 11606809 >seq9 Length=31747250 Score = 118 bits (130), Expect = 2e-24 Identities = 103/128 (80%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 273 TATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAAC 332 |||||||||||||||||||| ||||||||| | || ||| | |||||||||| || | Sbjct 2231150 TATTACGCACTCTTTCAAGGGTGGCTGCTTGTAGGCAAACTTTCTGGTTGTCTTTACACC 2231091 Query 333 TCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTT 392 | || |||||| ||||||| || ||||||||| |||||| ||||| ||| ||||| Sbjct 2231090 CCTACCTCCTTTATCACTGAGCGGTCATTTAGGGGCCCTAGCTGGTGATCCGGGTTGTTT 2231031 Query 393 CCCTCTCG 400 |||||||| Sbjct 2231030 CCCTCTCG 2231023 >seq4 Length=34671004 Score = 105 bits (116), Expect = 2e-20 Identities = 97/120 (81%), Gaps = 2/120 (2%) Strand=Plus/Plus Query 207 CCACAGCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGACCA 266 ||||||||||| | ||| ||||| |||||| | ||| || || | | | || || || Sbjct 18314549 CCACAGCTTCGACAGATCACTTA-GCCCCGTT-CATCTTCAGCACAAGAGCGCTCGATCA 18314606 Query 267 GTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTA 326 |||||||||||| ||||||||||| | |||||||||| | || ||||||||||||||||| Sbjct 18314607 GTGAGCTATTACACACTCTTTCAATGGTGGCTGCTTCTAGGCAAACCTCCTGGTTGTCTA 18314666 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177159872000