Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq37374 150 3e-34 seq37375 132 8e-29 seq3 132 8e-29 >seq37374 Length=151683 Score = 150 bits (166), Expect = 3e-34 Identities = 200/278 (72%), Gaps = 0/278 (0%) Strand=Plus/Minus Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTC 65 ||||||| ||||| |||||| | | |||||| || |||||| |||||||| | Sbjct 99382 GCTTTCGTCTCTCAGTGTCAGTGTCGGCCCAGCAGAGTGCTTTCGCCGTTGGTGTTCTTT 99323 Query 66 CGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAG 125 | || |||||||||||||||||| ||| | |||||| |||| || | | |||| || Sbjct 99322 CCGATCTCTACGCATTTCACCGCTCCACCGGAAATTCCCTCTGCCCCTACCGTACTCCAG 99263 Query 126 AAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCT 185 |||||| | || | ||||||||||| | ||| || | |||| Sbjct 99262 CTTGGTAGTTTCCACCGCCTGTCCAGGGTTGAGCCCTGGGATTTGACGGCGAACTTAAAA 99203 Query 186 TCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTA 245 || |||||| | |||||| |||||| | |||||||||||||||| ||| || ||| Sbjct 99202 AGCCACCTACAGACGCTTTACGCCCAATCATTCCGGATAACGCTTGCATCCTCTGTCTTA 99143 Query 246 CCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCC 283 |||||||||||||||| ||||||||| ||||||||| Sbjct 99142 CCGCGGCTGCTGGCACAGAGTTAGCCGATGCTTATTCC 99105 Score = 150 bits (166), Expect = 3e-34 Identities = 200/278 (72%), Gaps = 0/278 (0%) Strand=Plus/Plus Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTC 65 ||||||| ||||| |||||| | | |||||| || |||||| |||||||| | Sbjct 133586 GCTTTCGTCTCTCAGTGTCAGTGTCGGCCCAGCAGAGTGCTTTCGCCGTTGGTGTTCTTT 133645 Query 66 CGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAG 125 | || |||||||||||||||||| ||| | |||||| |||| || | | |||| || Sbjct 133646 CCGATCTCTACGCATTTCACCGCTCCACCGGAAATTCCCTCTGCCCCTACCGTACTCCAG 133705 Query 126 AAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCT 185 |||||| | || | ||||||||||| | ||| || | |||| Sbjct 133706 CTTGGTAGTTTCCACCGCCTGTCCAGGGTTGAGCCCTGGGATTTGACGGCGAACTTAAAA 133765 Query 186 TCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTA 245 || |||||| | |||||| |||||| | |||||||||||||||| ||| || ||| Sbjct 133766 AGCCACCTACAGACGCTTTACGCCCAATCATTCCGGATAACGCTTGCATCCTCTGTCTTA 133825 Query 246 CCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCC 283 |||||||||||||||| ||||||||| ||||||||| Sbjct 133826 CCGCGGCTGCTGGCACAGAGTTAGCCGATGCTTATTCC 133863 >seq37375 Length=404466 Score = 132 bits (146), Expect = 8e-29 Identities = 202/286 (71%), Gaps = 4/286 (1%) Strand=Plus/Plus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 |||| |||||||| | ||||||| || |||| | | |||||||| ||| || Sbjct 127184 CCCATGCTTTCGCACTCCAGCGTCGGTAGGGACCCAGAGAGCTGCCTTCGCTTTTGGCGT 127243 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 |||| |||| || | || |||||||| ||||||||| |||||| | ||||| ||| Sbjct 127244 TCCTTCGTAGATTTGCGGATTTCACCCCTACACACGAAATTCCACTCTCCTCTGTCTCAC 127303 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGA-GCCCATAGTTTTCACATCTGAC 179 ||||| || ||||| | ||| | | ||| | | | |||||| | || Sbjct 127304 TCAAGTGAATTGGTTTCGAGAGCATTCCACCAGTTTTTGGCGAC---TTTCACTTTCAAC 127360 Query 180 TTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTAC 239 | | |||||||| ||||||||| |||| | | |||| | ||| || ||| || | Sbjct 127361 CCGATTCACCGCCTACGTGCCCTTTACGCCCAGTCATTCCGAAGAACACTCGCCCCCCCC 127420 Query 240 GTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTC 285 || |||||||||||||||||||| ||||||||| ||||| |||||| Sbjct 127421 GTCTTACCGCGGCTGCTGGCACGGAGTTAGCCGGGGCTTCTTCCTC 127466 >seq3 Length=41204908 Score = 132 bits (146), Expect = 8e-29 Identities = 197/278 (71%), Gaps = 1/278 (0%) Strand=Plus/Plus Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTC 65 ||||||| ||||| |||||| | | |||||| || |||||| |||||||| | Sbjct 24655109 GCTTTCGTCTCTCAGTGTCAGTGTCGGCCCAGCAGAGTGCTTTCGCCGTTGGTGTTCTTT 24655168 Query 66 CGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAG 125 | || |||||||||||||||||| ||| |||||| |||| || | | |||| || Sbjct 24655169 CCGATCTCTACGCATTTCACCGCTCCACCGAAAATTCCCTCTGCCCCTACCGTACTCCAG 24655228 Query 126 AAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCT 185 |||||| | ||| | |||||||| || | ||| || | |||| Sbjct 24655229 CTTGGTAGTTTCCACTGCCTGTCCAGGGTTGAG-CCTGGGATTTGACGGCGAACTTAAAA 24655287 Query 186 TCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTA 245 || |||||| | |||||| |||||| | ||||||||| |||||| ||| || ||| Sbjct 24655288 AGCCACCTACAGACGCTTTACGCCCAATCATTCCGGATAATGCTTGCATCCTCTGTCTTA 24655347 Query 246 CCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCC 283 ||||| |||||||||| ||||||||| ||||||||| Sbjct 24655348 CCGCGACTGCTGGCACAGAGTTAGCCGATGCTTATTCC 24655385 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 828499916125