Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq4 118 1e-24 seq50 113 5e-23 seq9 113 5e-23 seq2 109 6e-22 >seq4 Length=34671004 Score = 118 bits (130), Expect = 1e-24 Identities = 137/181 (76%), Gaps = 3/181 (2%) Strand=Plus/Minus Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69 || |||||||||| ||||||||| | |||||||| |||| |||| | |||||||| ||| Sbjct 14796133 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGGATACATTAGCAT 14796074 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129 || |||| | | |||| | | | ||||| || || | ||| || ||||||| Sbjct 14796073 GGGATAACACCACAGGAT-TCTGATCCTATTGCGTTGGCCTTCGGGATCGGA-GTAATGA 14796016 Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189 |||| | ||| ||||||||| | ||||| || |||| |||||||||||||||||||| Sbjct 14796015 TAAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTA 14795956 Query 190 T 190 | Sbjct 14795955 T 14795955 >seq50 Length=345246 Score = 113 bits (124), Expect = 5e-23 Identities = 136/181 (75%), Gaps = 3/181 (2%) Strand=Plus/Plus Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69 || |||||||||| || |||||| | |||||||| |||| |||| | |||||||| ||| Sbjct 7872 CTGTTACTTTGAAGAACTTAGAGTGCTCAAAGCAAGCCTACGCTCTGGATACATTAGCAT 7931 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129 || |||| | |||||| | | | ||||| ||| || | ||| || ||||||| Sbjct 7932 GGGATAACACCATAGGAT-TCTGATCCTATTGTGTTGGCCTTCGGGATCGGA-GTAATGA 7989 Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189 | || | ||| ||||| ||| | ||||| || |||| |||||||||||||||||||| Sbjct 7990 TTAACAGGGACAGTCGCGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTA 8049 Query 190 T 190 | Sbjct 8050 T 8050 Score = 96.9 bits (106), Expect = 4e-18 Identities = 124/167 (74%), Gaps = 3/167 (2%) Strand=Plus/Plus Query 25 AAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGAATAATAGAATA 83 ||||||||| | |||||||| |||| |||| | |||||||| ||||| |||| | | | Sbjct 2012 AAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGGATACATTAGCATGGGATAACACCACA 2071 Query 84 GGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAAATACGGATAGT 143 ||| | | | ||||| ||| || | ||| || |||||||| || | ||| ||| Sbjct 2072 GGAT-TCTGATCCTATTGTGTTGGCCTTCGGGATCGGA-GTAATGATTAACAGGGACAGT 2129 Query 144 CGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190 |||||| | ||||| || || | ||||||||||||||||||||| Sbjct 2130 CGGGGGCATTCGTATTTCATAGTTAGAGGTGAAATTCTTGGATTTAT 2176 >seq9 Length=31747250 Score = 113 bits (124), Expect = 5e-23 Identities = 137/182 (75%), Gaps = 5/182 (3%) Strand=Plus/Plus Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69 || |||||||||| ||||||||| | |||||| | |||| |||| | |||||||| ||| Sbjct 25144409 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGGAAGCCTACGCTCTGGATACATTAGCAT 25144468 Query 70 GGAATAATAGAATAGGACGTGCGGTTCT-ATTTTGTAGGTTTCTAGGACCGCCCGTAATG 128 || |||| | | |||| | | | ||| ||| ||| || | ||| || |||||| Sbjct 25144469 GGGATAACACCACAGGA--TTCTGATCTTATTGTGTTGGCCTTCGGGATCGGA-GTAATG 25144525 Query 129 ATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTT 188 || || | ||| ||||||||| | ||||| || |||| ||||||||||||||||||| Sbjct 25144526 ATTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTT 25144585 Query 189 AT 190 || Sbjct 25144586 AT 25144587 >seq2 Length=35625406 Score = 109 bits (120), Expect = 6e-22 Identities = 135/181 (75%), Gaps = 3/181 (2%) Strand=Plus/Plus Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69 || |||||||||| ||||||||| | |||||||| |||| |||| | |||||| | ||| Sbjct 9191708 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGGATACATAAACAT 9191767 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129 || |||| | | |||| | | ||||||| ||| || | ||| || ||||||| Sbjct 9191768 GGGATAACACCACAGGAT-TCTGATTCTATTGTGTTGGCCTTCGGGATCGGA-GTAATGA 9191825 Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189 | || | ||| | | ||||| | ||||| || |||| |||||||||||||||||||| Sbjct 9191826 TTAACAGGGACAATTGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTA 9191885 Query 190 T 190 | Sbjct 9191886 T 9191886 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511814620000