Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq37374 264 3e-68 seq37375 170 5e-40 seq2 123 6e-26 seq1 116 9e-24 seq3 84.2 5e-14 >seq37374 Length=151683 Score = 264 bits (292), Expect = 3e-68 Identities = 302/404 (75%), Gaps = 30/404 (7%) Strand=Plus/Minus Query 11 ACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATTGTGCAA 70 ||||| ||||||||| | | |||||||||| ||| | |||||||| ||||||||| | || Sbjct 99061 ACCCGTAGGCCTTCTACCTTCACGCGGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAA 99002 Query 71 TATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGG 130 |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| Sbjct 99001 AATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGA 98942 Query 131 TCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCAACTAGC 190 |||||||||| ||||||||| |||| |||||| ||| || ||| || | ||||||||| Sbjct 98941 TCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGC 98882 Query 191 TAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGC 250 ||||| | | | | ||| || | || ||| ||| |||| || | Sbjct 98881 TAATCAGACGCGAGCCCCTCC--------TCGGGCGGA--TTCCTCCT-TTTGCTCCTCA 98833 Query 251 GACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGCAGTTTCC 310 | | || | ||||||||| |||||||||| ||| | ||||||| || || ||| Sbjct 98832 GCC--TACGGGGTATTAGCAGCCGTTTCCAGCTGTTGTTCCCCTCCCAAGGGTAGGTTCT 98775 Query 311 CAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTGTTACCG 370 | | |||||||||||||||||||| ||| || || |||| ||| Sbjct 98774 TACGCGTTACTCACCCGTCCGCCACT------GGAAACACCA-----CTTC------CCG 98732 Query 371 TTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 | |||||||||||||| |||| ||||||||||||||| ||||| Sbjct 98731 TCCGACTTGCATGTGTAAGGCATGCCGCCAGCGTTCATCCTGAG 98688 Score = 264 bits (292), Expect = 3e-68 Identities = 302/404 (75%), Gaps = 30/404 (7%) Strand=Plus/Plus Query 11 ACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATTGTGCAA 70 ||||| ||||||||| | | |||||||||| ||| | |||||||| ||||||||| | || Sbjct 133907 ACCCGTAGGCCTTCTACCTTCACGCGGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAA 133966 Query 71 TATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGG 130 |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| Sbjct 133967 AATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGA 134026 Query 131 TCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCAACTAGC 190 |||||||||| ||||||||| |||| |||||| ||| || ||| || | ||||||||| Sbjct 134027 TCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGC 134086 Query 191 TAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGC 250 ||||| | | | | ||| || | || ||| ||| |||| || | Sbjct 134087 TAATCAGACGCGAGCCCCTCC--------TCGGGCGGA--TTCCTCCT-TTTGCTCCTCA 134135 Query 251 GACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGCAGTTTCC 310 | | || | ||||||||| |||||||||| ||| | ||||||| || || ||| Sbjct 134136 GCC--TACGGGGTATTAGCAGCCGTTTCCAGCTGTTGTTCCCCTCCCAAGGGTAGGTTCT 134193 Query 311 CAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTGTTACCG 370 | | |||||||||||||||||||| ||| || || |||| ||| Sbjct 134194 TACGCGTTACTCACCCGTCCGCCACT------GGAAACACCA-----CTTC------CCG 134236 Query 371 TTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 | |||||||||||||| |||| ||||||||||||||| ||||| Sbjct 134237 TCCGACTTGCATGTGTAAGGCATGCCGCCAGCGTTCATCCTGAG 134280 >seq37375 Length=404466 Score = 170 bits (188), Expect = 5e-40 Identities = 154/193 (80%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 4 CTTTACAACCCGAA--GGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCC 61 |||||||| | | | | ||||||||| |||||| || |||| ||| ||||| ||||| Sbjct 127501 CTTTACAAGCGGCATTGCCCTTCTTCACTCACGCGATATTGCTGGATCGGGCTTTCGCCC 127560 Query 62 ATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 121 ||||| ||| |||||||||||||||| ||||| |||||| || |||||||||||| |||| Sbjct 127561 ATTGTCCAAGATTCCCCACTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCCAG 127620 Query 122 TGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCG 181 |||||||| |||||| |||||||||| | ||| | | || ||| ||| ||||| Sbjct 127621 TGTGGCTGATCATCCGAAAAGACCAGCTAAGCATCATTGGCTTGGTCAGCCTTTACCTGA 127680 Query 182 CCAACTAGCTAAT 194 ||||||| ||||| Sbjct 127681 CCAACTACCTAAT 127693 >seq2 Length=35625406 Score = 123 bits (136), Expect = 6e-26 Identities = 97/116 (84%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 48 TCAGGCTTGCGCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCG 107 |||||||| ||||||||| | || ||||||||||||| ||||||||||||||||| || Sbjct 30528507 TCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTATCTCCCGTAGGAGTCTGGGCCA 30528566 Query 108 TGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCT 163 ||||| | | ||||||||||| |||||||||| ||||| ||| ||| |||||| Sbjct 30528567 TGTCTTAATCCCAGTGTGGCTAATCATCCTCTCGGACCAACTACTCATCATCGCCT 30528622 Score = 84.2 bits (92), Expect = 5e-14 Identities = 114/158 (72%), Gaps = 1/158 (1%) Strand=Plus/Minus Query 37 GCATGGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGG 96 |||| ||| ||||||| || || |||| || || | | ||| || ||||| |||| Sbjct 25244573 GCATTGCTTCATCAGGTTTT-GCTCATTATGAAAAAATTTCCATTGAAACCTCCTTTAGG 25244515 Query 97 AGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATC 156 |||||| ||||||||||||||||||| ||| |||||||||| |||| || |||| Sbjct 25244514 AGTCTGAGTTGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCGAACCATTTATTGATC 25244455 Query 157 GTCGCCTAGGTGGGCCATTACCCCGCCAACTAGCTAAT 194 || | | | | ||| | | ||||||||||||| Sbjct 25244454 ATCATTTTGATAAGTTATTGCTTCACCAACTAGCTAAT 25244417 Score = 84.2 bits (92), Expect = 5e-14 Identities = 212/322 (66%), Gaps = 38/322 (12%) Strand=Plus/Plus Query 93 TAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGG 152 ||||||||| | || ||||||||| |||||||||||| ||||| |||||||||| ||| Sbjct 34664617 TAGGAGTCTAGGCCATGTCTCAGTCCCAGTGTGGCTGATCATCTTCTCAGACCAACTACT 34664676 Query 153 GATCGTCGCCTAGGTGGGCCATTACCCCGCCAACTAGCTAATCCCATCTGGGTTCATCCG 212 || | ||| | ||| | | |||||||||||||| | | | || ||| Sbjct 34664677 GA--------TTGGTAAGTTATTGCTTCACCAACTAGCTAATCAGACGCGAGCTCCTCC- 34664727 Query 213 ATAGTGAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCCAC 272 || | || ||| ||| |||| || | | ||| | ||||||||| | Sbjct 34664728 -------TTGGACGGA--TTCCTCCT-TTTGCTCCT--CAGCTTACGGGGTATTAGCAAT 34664775 Query 273 CGTTTCCAGTGGTTATCCCCCTCCATCAGGCAGTTTCCCAGACATTACTCACCCGTCCGC 332 ||||||||| ||| | |||||| | || || | | |||||||||||| || Sbjct 34664776 CGTTTCCAGCTGTTGTTTCCCTCCCAAGGATAGGTTTTAACGCGTTACTCACCCGTTTGC 34664835 Query 333 CACTCGTCAGCGAAGCAGCAAGCTGCTTCCTGTTACCGTTCGACTTGCATGTGTTAGGCC 392 |||| ||| | || || || |||| |||||||||||||| |||| Sbjct 34664836 CACT-------GAA--AACA--------CCACTTTCCGTCCGACTTGCATGTGTAAGGCA 34664878 Query 393 TGCCGCCAGCGTTCAATCTGAG 414 |||| ||||| |||| ||||| Sbjct 34664879 TGCCACCAGCATTCATCCTGAG 34664900 >seq1 Length=42234885 Score = 116 bits (128), Expect = 9e-24 Identities = 132/176 (75%), Gaps = 1/176 (1%) Strand=Plus/Plus Query 20 CCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCCCA 79 |||||| | | || ||| ||| ||| ||||||||| |||||| | | |||| ||| Sbjct 33101615 CCTTCTACCTTCATGCGACATTGCTTTATCAGGCTTTTATCCATTGCGGGAAATTCTCCA 33101674 Query 80 CTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCT 139 ||| |||| | ||||||| ||| | |||||||| | ||| | ||||| |||| |||| Sbjct 33101675 CTGTTGCCGTCTATAGGAGTTTGGGC-GTGTCTCAATCCCATTATGGCTAATCATTCTCT 33101733 Query 140 CAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCAACTAGCTAATC 195 | ||||||||| |||| || ||| ||| ||| ||| | | |||||||||||||| Sbjct 33101734 CGGACCAGCTACTGATCATCACCTTGGTCGGCTTTTATCTCACCAACTAGCTAATC 33101789 >seq3 Length=41204908 Score = 84.2 bits (92), Expect = 5e-14 Identities = 212/322 (66%), Gaps = 38/322 (12%) Strand=Plus/Minus Query 93 TAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGG 152 ||||||||| | || ||||||||| |||||||||||| ||||| |||||||||| ||| Sbjct 29356447 TAGGAGTCTAGGCCATGTCTCAGTCCCAGTGTGGCTGATCATCTTCTCAGACCAACTACT 29356388 Query 153 GATCGTCGCCTAGGTGGGCCATTACCCCGCCAACTAGCTAATCCCATCTGGGTTCATCCG 212 || | ||| | ||| | | |||||||||||||| | | | || ||| Sbjct 29356387 GA--------TTGGTAAGTTATTGCTTCACCAACTAGCTAATCAGACGCGAGCTCCTCC- 29356337 Query 213 ATAGTGAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGCGACGTTATGCGGTATTAGCCAC 272 || | || ||| ||| |||| || | | ||| | ||||||||| | Sbjct 29356336 -------TTGGACGGA--TTCCTCCT-TTTGCTCCT--CAGCTTACGGGGTATTAGCAAT 29356289 Query 273 CGTTTCCAGTGGTTATCCCCCTCCATCAGGCAGTTTCCCAGACATTACTCACCCGTCCGC 332 ||||||||| ||| | |||||| | || || | | |||||||||||| || Sbjct 29356288 CGTTTCCAGCTGTTGTTTCCCTCCCAAGGATAGGTTTTAACGCGTTACTCACCCGTTTGC 29356229 Query 333 CACTCGTCAGCGAAGCAGCAAGCTGCTTCCTGTTACCGTTCGACTTGCATGTGTTAGGCC 392 |||| ||| | || || || |||| |||||||||||||| |||| Sbjct 29356228 CACT-------GAA--AACA--------CCACTTTCCGTCCGACTTGCATGTGTAAGGCA 29356186 Query 393 TGCCGCCAGCGTTCAATCTGAG 414 |||| ||||| |||| ||||| Sbjct 29356185 TGCCACCAGCATTCATCCTGAG 29356164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1221943128000