Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq37374 322 1e-85 seq37375 269 8e-70 seq1 129 2e-27 seq3 125 2e-26 seq2 125 2e-26 >seq37374 Length=151683 Score = 322 bits (356), Expect = 1e-85 Identities = 278/342 (81%), Gaps = 3/342 (1%) Strand=Plus/Plus Query 160 CGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGAC 219 |||||||||||||||||||||| ||| || |||||||||||||| |||||||||| | Sbjct 98870 CGCGTCTGATTAGCTAGTTGGTGAGGCAATAGCTTACCAAGGCGATGATCAGTAGCTGGT 98929 Query 220 CTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAG 279 | |||||| ||||| |||||| ||| |||||||||||| ||| ||||||||||||||||| Sbjct 98930 CCGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAG 98989 Query 280 CAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGA 339 ||||||||||| || | |||||||| ||||||||| | ||||| ||||||||| | || Sbjct 98990 CAGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATGCCGCGTGAAGGTAGA 99049 Query 340 AGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGA--TAATGACGGTACTTGAGGAGG 397 |||||| |||||| | || ||| | | | ||||| |||||||||| | ||| Sbjct 99050 AGGCCTACGGGTCATGAACTTCTTTTCCCGGAGAAGAAGCAATGACGGTATCCGGGGAAT 99109 Query 398 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 457 |||| ||||||||| ||||||||||||||||||| || ||| || ||||||||||| Sbjct 99110 AAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGCAAGCGTTATCCG 99169 Query 458 GAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGT 499 |||| | | |||||||||| || |||||||| || |||||| Sbjct 99170 GAATGA-TTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGT 99210 Score = 322 bits (356), Expect = 1e-85 Identities = 278/342 (81%), Gaps = 3/342 (1%) Strand=Plus/Minus Query 160 CGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGAC 219 |||||||||||||||||||||| ||| || |||||||||||||| |||||||||| | Sbjct 134098 CGCGTCTGATTAGCTAGTTGGTGAGGCAATAGCTTACCAAGGCGATGATCAGTAGCTGGT 134039 Query 220 CTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAG 279 | |||||| ||||| |||||| ||| |||||||||||| ||| ||||||||||||||||| Sbjct 134038 CCGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAG 133979 Query 280 CAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGA 339 ||||||||||| || | |||||||| ||||||||| | ||||| ||||||||| | || Sbjct 133978 CAGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATGCCGCGTGAAGGTAGA 133919 Query 340 AGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGA--TAATGACGGTACTTGAGGAGG 397 |||||| |||||| | || ||| | | | ||||| |||||||||| | ||| Sbjct 133918 AGGCCTACGGGTCATGAACTTCTTTTCCCGGAGAAGAAGCAATGACGGTATCCGGGGAAT 133859 Query 398 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 457 |||| ||||||||| ||||||||||||||||||| || ||| || ||||||||||| Sbjct 133858 AAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGCAAGCGTTATCCG 133799 Query 458 GAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGT 499 |||| | | |||||||||| || |||||||| || |||||| Sbjct 133798 GAATGA-TTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGT 133758 >seq37375 Length=404466 Score = 269 bits (298), Expect = 8e-70 Identities = 258/327 (79%), Gaps = 5/327 (2%) Strand=Plus/Minus Query 168 ATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGAGAGG 227 ||||| |||||||| |||||| |||| |||||| | | ||| |||| | || || Sbjct 127693 ATTAGGTAGTTGGTCAGGTAAAGGCTGACCAAGCCAATGATGCTTAGCTGGTCTTTTCGG 127634 Query 228 GTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGGG 287 ||||| |||||| ||| |||||||||||| || ||||| ||||| ||||||||||||| Sbjct 127633 ATGATCAGCCACACTGGGACTGAGACACGGCCCGGACTCCCACGGGGGGCAGCAGTGGGG 127574 Query 288 AATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCC--T 345 ||| ||| ||||||||| |||||| ||| |||||| |||||||| || ||||| | | Sbjct 127573 AATCTTGGACAATGGGCGAAAGCCCGATCCAGCAATATCGCGTGAGTGAAGAAGGGCAAT 127514 Query 346 TCGGGTCGTAAAGCTCTGTCCTCAA--GGAAGATAATGACGGTACTTGAGGAGGAAGCCC 403 | | | |||||||||| || || | | ||| ||||| | ||| ||||| ||||||| Sbjct 127513 GCCGCTTGTAAAGCTCTTTCGTCGAGTGCGCGATCATGACAGGACTCGAGGAAGAAGCCC 127454 Query 404 CGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTA 463 ||||||||| |||||||||||||||||||| ||| |||||| || ||| | |||||| | Sbjct 127453 CGGCTAACTCCGTGCCAGCAGCCGCGGTAAGACGGGGGGGGCGAGTGTTCTTCGGAATGA 127394 Query 464 CTGGGGCGTAAAGGGTGCGTAGGTGGT 490 || |||||||||||| |||||| ||| Sbjct 127393 CT-GGGCGTAAAGGGCACGTAGGCGGT 127368 >seq1 Length=42234885 Score = 129 bits (142), Expect = 2e-27 Identities = 133/173 (77%), Gaps = 1/173 (1%) Strand=Plus/Minus Query 160 CGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGAC 219 || ||||||||||||||||||| || ||| || ||||||| || |||||||||| | Sbjct 33101796 CGTGTCTGATTAGCTAGTTGGTGAGATAAAAGCCGACCAAGGTGATGATCAGTAGCTGGT 33101737 Query 220 CTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAG 279 | ||||| |||| |||| | ||| | |||||||| | ||||||||||| | |||| Sbjct 33101736 CCGAGAGAATGATTAGCCATAATGGGATTGAGACAC-GCCCAAACTCCTATAGACGGCAA 33101678 Query 280 CAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGA 332 |||||| |||| | | |||||| ||||||||||| ||||| | ||| ||| Sbjct 33101677 CAGTGGAGAATTTCCCGCAATGGATAAAAGCCTGATAAAGCAATGTCGCATGA 33101625 >seq3 Length=41204908 Score = 125 bits (138), Expect = 2e-26 Identities = 143/190 (75%), Gaps = 3/190 (2%) Strand=Plus/Minus Query 312 TGATGCAGCAACGCCGCGTGAGCGATGAAGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAG 371 ||| | ||||| ||||||||| | |||||||| |||||| | || ||| | | | Sbjct 24655468 TGACGGAGCAATGCCGCGTGAAGGTAGAAGGCCTACGGGTCATGAACTTCTTTTCCCGGA 24655409 Query 372 GAAGAT--AATGACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCG 429 ||||| |||||||||| | ||| |||| ||||||||| |||||||||| |||| Sbjct 24655408 GAAGAAGCAATGACGGTATCCGGGGAATAAGCATCGGCTAACTCTGTGCCAGCAGTCGCG 24655349 Query 430 GTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGG 489 |||| || ||| || ||| ||||||||||| | | |||||||||| || |||||||| Sbjct 24655348 GTAAGACAGAGGATGCAAGCATTATCCGGAATGA-TTGGGCGTAAAGCGTCTGTAGGTGG 24655290 Query 490 TTTCTTAAGT 499 || |||||| Sbjct 24655289 CTTTTTAAGT 24655280 Score = 80.6 bits (88), Expect = 8e-13 Identities = 83/110 (75%), Gaps = 8/110 (7%) Strand=Plus/Plus Query 160 CGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGAC 219 |||||||||||||||||||||| | | || ||||||| |||||||| | Sbjct 29356346 CGCGTCTGATTAGCTAGTTGGTGAAGCAATAACTTACCA--------ATCAGTAGTTGGT 29356397 Query 220 CTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTA 269 |||||| | ||||| |||||| ||| ||||||||| || | | ||||||| Sbjct 29356398 CTGAGAAGATGATCAGCCACACTGGGACTGAGACATGGCCTAGACTCCTA 29356447 >seq2 Length=35625406 Score = 125 bits (138), Expect = 2e-26 Identities = 122/155 (79%), Gaps = 4/155 (3%) Strand=Plus/Minus Query 160 CGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGAC 219 || ||||||||| ||| ||| ||| || |||||| ||||||| ||| ||||| | Sbjct 30528657 CGTGTCTGATTAACTA-TTG---AGGCAATAGCTTACTAAGGCGATGATGAGTAGTTGGT 30528602 Query 220 CTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAG 279 | |||||| |||| |||||| ||| | | ||||| || ||| ||||||||||||| || Sbjct 30528601 CCGAGAGGATGATTAGCCACACTGGGATTAAGACATGGCCCAGACTCCTACGGGAGATAG 30528542 Query 280 CAGTGGGGAATATTGCACAATGGGCAAAAGCCTGA 314 ||||||||||| || | |||||||| ||||||||| Sbjct 30528541 CAGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGA 30528507 Score = 87.8 bits (96), Expect = 5e-15 Identities = 118/163 (72%), Gaps = 1/163 (1%) Strand=Plus/Plus Query 163 GTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTG 222 |||| |||||||||||||| | | || |||| ||| || ||||| || | | Sbjct 25244412 GTCTAATTAGCTAGTTGGTGAAGCAATAACTTATCAAAATGATGATCAATAAATGGTTCG 25244471 Query 223 AGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAG 282 ||||| ||||| | |||| |||||||||||||| || ||||||| ||||| || Sbjct 25244472 AGAGGATGATCAGTCACACTGGAACTGAGACACAACTCAGACTCCTAAAGGAGGTTTCAA 25244531 Query 283 TGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGC 325 ||| | | || || |||| |||||| ||||||| ||||| || Sbjct 25244532 TGGAAATTTTTTCATAATGAGCAAAA-CCTGATGAAGCAATGC 25244573 Score = 80.6 bits (88), Expect = 8e-13 Identities = 83/110 (75%), Gaps = 8/110 (7%) Strand=Plus/Minus Query 160 CGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGAC 219 |||||||||||||||||||||| | | || ||||||| |||||||| | Sbjct 34664718 CGCGTCTGATTAGCTAGTTGGTGAAGCAATAACTTACCA--------ATCAGTAGTTGGT 34664667 Query 220 CTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTA 269 |||||| | ||||| |||||| ||| ||||||||| || | | ||||||| Sbjct 34664666 CTGAGAAGATGATCAGCCACACTGGGACTGAGACATGGCCTAGACTCCTA 34664617 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1497040272000