Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq37374 262 9e-68 seq37375 221 3e-55 seq3 168 2e-39 seq301 73.4 1e-10 >seq37374 Length=151683 Score = 262 bits (290), Expect = 9e-68 Identities = 298/397 (75%), Gaps = 2/397 (1%) Strand=Plus/Plus Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 72 |||| ||||||||| ||||||||||||||||||| || ||| || ||||||||||| Sbjct 99110 AAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGCAAGCGTTATCCG 99169 Query 73 GAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGG 132 |||| | ||||||||||| || |||||||| || |||||| | || ||| | | || Sbjct 99170 GAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTTCGCCGTCAAATCCCAGGG 99229 Query 133 CTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAAT 192 |||||||| || || | |||||| | ||| |||| | | ||||||| ||||| Sbjct 99230 CTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGGGGCAGAGGGAAT 99289 Query 193 TCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTT 252 | | ||| |||||||||||||||||| || | | |||||||| |||||| || | Sbjct 99290 TTCCGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACGGCGAAAGCACTCT 99349 Query 253 GCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCC 312 ||||| | | |||||||||||| ||||||| ||||||| || ||||||||||||| Sbjct 99350 GCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCGAATGGGATTAGATACCC 99409 Query 313 TGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCAT-AAGTGCTCCGGTG 371 ||||||| ||||||||||||| |||||||| | | | ||| || | | | || Sbjct 99410 CAGTAGTCCTAGCCGTAAACGATGGATACTAGGCG-CTGTGCGTATCGACCCGTGCAATG 99468 Query 372 CCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 | | ||| ||||| ||||||| || ||||||||||| Sbjct 99469 CTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTA 99505 Score = 262 bits (290), Expect = 9e-68 Identities = 298/397 (75%), Gaps = 2/397 (1%) Strand=Plus/Minus Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 72 |||| ||||||||| ||||||||||||||||||| || ||| || ||||||||||| Sbjct 133858 AAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGCAAGCGTTATCCG 133799 Query 73 GAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGG 132 |||| | ||||||||||| || |||||||| || |||||| | || ||| | | || Sbjct 133798 GAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTTCGCCGTCAAATCCCAGGG 133739 Query 133 CTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAAT 192 |||||||| || || | |||||| | ||| |||| | | ||||||| ||||| Sbjct 133738 CTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGGGGCAGAGGGAAT 133679 Query 193 TCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTT 252 | | ||| |||||||||||||||||| || | | |||||||| |||||| || | Sbjct 133678 TTCCGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACGGCGAAAGCACTCT 133619 Query 253 GCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCC 312 ||||| | | |||||||||||| ||||||| ||||||| || ||||||||||||| Sbjct 133618 GCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCGAATGGGATTAGATACCC 133559 Query 313 TGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCAT-AAGTGCTCCGGTG 371 ||||||| ||||||||||||| |||||||| | | | ||| || | | | || Sbjct 133558 CAGTAGTCCTAGCCGTAAACGATGGATACTAGGCG-CTGTGCGTATCGACCCGTGCAATG 133500 Query 372 CCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 | | ||| ||||| ||||||| || ||||||||||| Sbjct 133499 CTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTA 133463 >seq37375 Length=404466 Score = 221 bits (244), Expect = 3e-55 Identities = 300/412 (73%), Gaps = 16/412 (4%) Strand=Plus/Minus Query 2 ACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCT 61 ||| ||||| |||||||||||||||| |||||||||||||||||||| ||| |||||| Sbjct 127470 ACTCGAGGAAGAAGCCCCGGCTAACTCCGTGCCAGCAGCCGCGGTAAGACGGGGGGGGCG 127411 Query 62 AGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTG 121 || ||| | |||||| ||||||||||||||| |||||| ||| | || | ||| Sbjct 127410 AGTGTTCTTCGGAATGACTGGGCGTAAAGGGCACGTAGGCGGTGAATCGGGTTGAAAGTG 127351 Query 122 AAAGGCTATGGCTCAACCCCG-GGACTGCTTTTGAAAC---TGCAGGGCTAGAGTGCAGG 177 |||| | | | || | | ||| |||| | ||||| | || || ||||| Sbjct 127350 AAAGTC---GCCAAAAACTGGTGGAATGCTCTCGAAACCAATTCA---CTTGAGTGAGAC 127297 Query 178 AGGGGCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAG 237 || || ||||||||| | |||||| |||||||| || | || | | |||||| ||| Sbjct 127296 AGAGGAGAGTGGAATTTCGTGTGTAGGGGTGAAATCCGCAAATCTACGAAGGAACGCCAA 127237 Query 238 TGGCGAAGGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAA 297 |||||||| ||| |||| || ||| ||| | ||||||| |||||||| || Sbjct 127236 AAGCGAAGGCAGCTCTCTGGGTCCCTACCGACGCTGGAGTGCGAAAGCATGGGGAGCGAA 127177 Query 298 CAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCA 357 | ||||||||||||||||||||||| |||||||||||||| | | | | | | Sbjct 127176 CGGGATTAGATACCCTGGTAGTCCATGCCGTAAACGATGAGTGTTCGCCCTTG----GTC 127121 Query 358 TAAGT-GCTCCGGTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 || || | || || ||| |||| ||||| ||||||| || ||||||||||| Sbjct 127120 TACGTGGATCAGGGGCC-CAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTA 127070 >seq3 Length=41204908 Score = 168 bits (186), Expect = 2e-39 Identities = 202/273 (74%), Gaps = 1/273 (0%) Strand=Plus/Minus Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 72 |||| ||||||||| |||||||||| |||||||| || ||| || ||| ||||||| Sbjct 24655380 AAGCATCGGCTAACTCTGTGCCAGCAGTCGCGGTAAGACAGAGGATGCAAGCATTATCCG 24655321 Query 73 GAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGG 132 |||| | ||||||||||| || |||||||| || |||||| | || ||| | | || Sbjct 24655320 GAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTTCGCCGTCAAATCCCA-GG 24655262 Query 133 CTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAAT 192 |||||||| || || | |||||| | ||| |||| | | ||||||| ||||| Sbjct 24655261 CTCAACCCTGGACAGGCAGTGGAAACTACCAAGCTGGAGTACGGTAGGGGCAGAGGGAAT 24655202 Query 193 TCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTT 252 | ||| |||||||||||||||||| || | | |||||||| |||||| || | Sbjct 24655201 TTTCGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACGGCGAAAGCACTCT 24655142 Query 253 GCTGGACTGTAACTGACACTGAGGCTCGAAAGC 285 ||||| | | |||||||||||| ||||||| Sbjct 24655141 GCTGGGCCGACACTGACACTGAGAGACGAAAGC 24655109 >seq301 Length=83962 Score = 73.4 bits (80), Expect = 1e-10 Identities = 66/83 (80%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 31 TGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTGGGCGTAAAG 90 ||||| |||||||||||| | ||| || ||||||||| ||||| | ||||||||||| Sbjct 65467 TGCCAACAGCCGCGGTAAGATAGAGGATGCAAGCGTTATCTGGAATGATTGGGCGTAAAG 65526 Query 91 GGTGCGTAGGTGGTTTCTTAAGT 113 || ||||||| || |||||| Sbjct 65527 CGTCTGTAGGTGACTTTTTAAGT 65549 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1202750304000