Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq37375 194 6e-47 seq37374 181 4e-43 seq627 114 4e-23 seq6 109 2e-21 >seq37375 Length=404466 Score = 194 bits (214), Expect = 6e-47 Identities = 293/414 (71%), Gaps = 22/414 (5%) Strand=Plus/Minus Query 76 ACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAGTTAAACTACCCACCA 135 ||||| | | |||||||||| ||| ||||| || ||||||||| ||||||||||||| Sbjct 257639 ACCTTCGCACACCTCCGTTACTCTTTAGGAGG-CATCCGCCCCAGATAAACTACCCACCT 257581 Query 136 GGCACTGTCCC---CAACCCAGATCATGGG--CCAAGGTTAGATATCCACTACGGTCAGA 190 ||| |||||| | ||| ||| | || | |||||| |||| | ||| Sbjct 257580 CGCAGTGTCCCGCCCCCCCCGAATCTTCGGTGCGGCGGTTAGGCATCCTTAGACGAAAGA 257521 Query 191 GTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAGTCTCCCACCTA 250 ||||| ||||| | | ||| | | |||| | |||||||||| Sbjct 257520 GTGGTCTTTCAGGATTGGT--------------CGTT-CTGTGTCATCGCCTCCCACCTA 257476 Query 251 TCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCC-CGGGGTCTTT 309 ||||||||| | | || || | | |||||||||| ||||| | ||||||||| Sbjct 257475 TCCTACACATTCGATCAAGGTTGTCACTGCGAAGCTATAGTTAAGGTGCACGGGGTCTTA 257416 Query 310 TCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCGGGCCTGTGGT 369 |||| |||| | | ||||||| || | | ||||||||||||| | || Sbjct 257415 CCGTCTAGCCGTTGGTACTCCGCATCTTCACGGAGAATTCAATTTCACCGGGTCCATGTC 257356 Query 370 TGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAAT 429 |||||||| ||| ||||||||| |||||||||||||||| ||||| ||||||||||| Sbjct 257355 GGAGACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAAT 257296 Query 430 TTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTCAATT 483 ||||||||||||||| |||| |||||| ||||||||||| |||||||| ||| Sbjct 257295 TTCGCTACCTTAGGACAGTTAGAGTTACTGCCGCCGTTTACCGGGGCTTCCATT 257242 >seq37374 Length=151683 Score = 181 bits (200), Expect = 4e-43 Identities = 340/489 (70%), Gaps = 17/489 (3%) Strand=Plus/Minus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||| || |||| |||||||||||||||| ||| || ||||| | || || Sbjct 104973 TCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACTCGAGGGCCAATCTCC 104914 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 | | | |||| |||||||| |||||||||||| ||| |||||| | || |||||| Sbjct 104913 GTCTGGCCCGAGGAAACCTTTGCACGCCTCCGTTACCTTTGGGGAGGCCTAC-GCCCCAT 104855 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCC---AGATCATGGGCCAAGGTTAGATATC 177 ||||| | ||| | ||||||||| || || || ||| |||||||||| || Sbjct 104854 AGAAACTGTCTACCTGAGACTGTCCCCCGGCCCGTAGGTCCTGGCACAAGGTTAGAATTC 104795 Query 178 CACTACGGTCAGAGTGGTATTTCAACAACGACTC---CACAACCACTAGCGTGGCCGCAT 234 | | ||||||||||| ||| | | ||| | | ||| || |||| | Sbjct 104794 TAGCTCTTCCAGAGTGGTATCTCACTGATGGCTCTGGCCCCCCCAGAAGAA-GGCCT--T 104738 Query 235 CATAGTCTCCCACCTATCCTACACA--AACCGCACCGAATGCCAATACCAAGCTATAGTG 292 | | | | ||||||| || | || || || | || |||||| ||| | | |||| Sbjct 104737 CTTTGCCCTCCACCTAAGCTGCGCAGGAAAAGCCC--AAAGCCAATCCCAGGAAACAGTG 104680 Query 293 AAGGTCCCG-GGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAA 351 ||| | | |||||||| |||| | || | | ||||||| || | | | Sbjct 104679 AAGCTTCATAGGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTA 104620 Query 352 TTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTCGG 410 |||||||| | || | ||||||| | || |||||||||| ||||||| |||||| Sbjct 104619 TTTCACCGAGTCTCTCTCCGAGACAGT-GCCCAGATCGTTACGCCTTTCGTGCGGGTCGG 104561 Query 411 AACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTAC 470 |||||||||||||||||||||||||||||||||| ||||||||||| |||||||| || Sbjct 104560 AACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTCAC 104501 Query 471 TGGGGCTTC 479 |||||||| Sbjct 104500 CGGGGCTTC 104492 Score = 181 bits (200), Expect = 4e-43 Identities = 340/489 (70%), Gaps = 17/489 (3%) Strand=Plus/Plus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||| || |||| |||||||||||||||| ||| || ||||| | || || Sbjct 127995 TCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACTCGAGGGCCAATCTCC 128054 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 | | | |||| |||||||| |||||||||||| ||| |||||| | || |||||| Sbjct 128055 GTCTGGCCCGAGGAAACCTTTGCACGCCTCCGTTACCTTTGGGGAGGCCTAC-GCCCCAT 128113 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCC---AGATCATGGGCCAAGGTTAGATATC 177 ||||| | ||| | ||||||||| || || || ||| |||||||||| || Sbjct 128114 AGAAACTGTCTACCTGAGACTGTCCCCCGGCCCGTAGGTCCTGGCACAAGGTTAGAATTC 128173 Query 178 CACTACGGTCAGAGTGGTATTTCAACAACGACTC---CACAACCACTAGCGTGGCCGCAT 234 | | ||||||||||| ||| | | ||| | | ||| || |||| | Sbjct 128174 TAGCTCTTCCAGAGTGGTATCTCACTGATGGCTCTGGCCCCCCCAGAAGAA-GGCCT--T 128230 Query 235 CATAGTCTCCCACCTATCCTACACA--AACCGCACCGAATGCCAATACCAAGCTATAGTG 292 | | | | ||||||| || | || || || | || |||||| ||| | | |||| Sbjct 128231 CTTTGCCCTCCACCTAAGCTGCGCAGGAAAAGCCC--AAAGCCAATCCCAGGAAACAGTG 128288 Query 293 AAGGTCCCG-GGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAA 351 ||| | | |||||||| |||| | || | | ||||||| || | | | Sbjct 128289 AAGCTTCATAGGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTA 128348 Query 352 TTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTCGG 410 |||||||| | || | ||||||| | || |||||||||| ||||||| |||||| Sbjct 128349 TTTCACCGAGTCTCTCTCCGAGACAGT-GCCCAGATCGTTACGCCTTTCGTGCGGGTCGG 128407 Query 411 AACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTAC 470 |||||||||||||||||||||||||||||||||| ||||||||||| |||||||| || Sbjct 128408 AACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTCAC 128467 Query 471 TGGGGCTTC 479 |||||||| Sbjct 128468 CGGGGCTTC 128476 >seq627 Length=217819 Score = 114 bits (126), Expect = 4e-23 Identities = 145/198 (73%), Gaps = 1/198 (1%) Strand=Plus/Minus Query 282 AAGCTATAGTGAAGGTCC-CGGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTAC 340 || ||||||| ||||| | ||||||||| |||| |||| | | |||||||||| Sbjct 16457 AAACTATAGTTAAGGTGCACGGGGTCTTACCGTCTAGCCGGTGGTACTCCGCATCTTTAC 16398 Query 341 TCGTACTGCAATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCG 400 | | |||||| |||||| | | |||||| | ||||||||| ||||||| Sbjct 16397 GGAGAATTCAATTTTACCGGGTCCATATCGGAGACAATGGAACAGTCGTTACACCATTCG 16338 Query 401 TGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCAC 460 |||||||| ||||| | | ||||||||||||||| |||||| |||| |||||| | Sbjct 16337 TGCAGGTCACTACTTATGCAATAAGGAATTTCGCTACTTTAGGACAGTTAGAGTTACTGC 16278 Query 461 CGCCGTTTACTGGGGCTT 478 ||| |||||| |||| || Sbjct 16277 CGCTGTTTACCGGGGTTT 16260 >seq6 Length=19356003 Score = 109 bits (120), Expect = 2e-21 Identities = 81/95 (85%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 445 ||||||| || ||||||| ||| ||||||||| |||||| ||||||||||||||||||| Sbjct 11601319 TCGTTACACCTTTCGTGCGGGTTGGAACTTACTCGACAAAGAATTTCGCTACCTTAGGAC 11601378 Query 446 GGTTATAGTTACCACCGCCGTTTACTGGGGCTTCA 480 |||||||||| ||| | ||| || ||||||||| Sbjct 11601379 TATTATAGTTACGACCACTGTTCACCGGGGCTTCA 11601413 Score = 77.0 bits (84), Expect = 1e-11 Identities = 57/67 (85%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 414 TTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGG 473 |||||||||||||||||| ||||| |||||| |||||||||| ||| | ||| || || Sbjct 11605854 TTACCCGACAAGGAATTTTGCTACATTAGGACTATTATAGTTACGACCACTGTTCACCGG 11605913 Query 474 GGCTTCA 480 ||||||| Sbjct 11605914 GGCTTCA 11605920 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1701763728000