Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_023718.1 Length=26499 Score E Sequences producing significant alignments: (Bits) Value seq1272 289 5e-74 >seq1272 Length=102696 Score = 289 bits (320), Expect = 5e-74 Identities = 461/659 (70%), Gaps = 3/659 (0%) Strand=Plus/Plus Query 6063 GGTCGGATCTTTTTCACGACAGACTTGCACGGGCACTACGATCTGTTGCATGAAGCGTTG 6122 ||||| | || ||| || ||| ||||||| ||||| || |||| | ||| | Sbjct 23928 GGTCGCCTATTCTTCGTGAGTGACCTGCACGGTTGTTACGACCTACTGCACTACGCGCTC 23987 Query 6123 AGAGAAGTCGCCTTTGACGAAACCAAAGACTTCCTATTCGTAGGCGGTGACTGGACTGAC 6182 ||||||| | || ||| ||||||||| | || ||| ||| || |||||||| ||| Sbjct 23988 CGAGAAGTAGGATTCGACTCTACCAAAGACCTTCTGTTCTCAGGAGGAGACTGGACAGAC 24047 Query 6183 CGTGGGCCGTACAGCAATACGGTACTCGACTACATCAATGAGCGATGGATTGCTAGCGTT 6242 ||||| || |||| || || ||||||||| | |||||| ||| || || Sbjct 24048 CGTGGTCCTGACAGTAAACATGTGCTCGACTACCTGTATGAGCCTTGGGTTCACTCAGTC 24107 Query 6243 CGTGGTAATCATGAGCAAATGTTCATCGAAGGATTTGAGGCTCACTGGCATCCAAATAAC 6302 || ||||||||||| | |||||||| |||| || ||| ||||||||||||||| ||| Sbjct 24108 CGAGGTAATCATGAAGAGATGTTCATTGAAGCTTTCGAGTCTCACTGGCATCCAACAAAC 24167 Query 6303 CGTAGTGTACTGACGTTGAGAGCACATGGTGGTGACTGGATTTGGTCT-ATGTC--TGAC 6359 | || || || ||| ||| || || ||||| ||||| ||| | || | |||| Sbjct 24168 AGGTCAGTGCTTACACTGAAAGCCCACGGCGGTGAATGGATATGGCGTGATCTTAATGAC 24227 Query 6360 CTTGACAAGATTATGATCCACGAAGCATTCTCAGCAATGCCTCTTGGTATCGAAATCCTG 6419 ||||||||||| | |||||||| ||||||||| ||||||| || || || ||| | Sbjct 24228 CTTGACAAGATCCTAATCCACGAGGCATTCTCAAGCCTGCCTCTAGGGATTGAGATCATC 24287 Query 6420 TTGCCAAACGATCAGAAAGTAGGTATAATCCATGCCGAAGTTCCGTACAACGATTGGGAT 6479 |||| | | ||| | || || || ||||||||||||||||||||||||| ||| || Sbjct 24288 ATGCCCGAAGGTCATAGGGTGGGGATTGTCCATGCCGAAGTTCCGTACAACGACTGGAAT 24347 Query 6480 CAATTCAAAGCGATCACCAAGGCTGAACTTGATTGGGATGGTACAGCAACCGCTCAGTGG 6539 || |||| || |||||||| || ||| | || |||||||| |||||| || |||||| Sbjct 24348 CAGTTCAGAGACATCACCAAAGCCGAATTGGAATGGGATGGGCAAGCAACAGCACAGTGG 24407 Query 6540 GCTCGGACTTGGTACACTCGACGTTATCAAGGTCAAGTGAAAGGTGTTGATGTCGTTCTG 6599 || || |||||||||| | || ||| | ||||||||||| ||| | || || Sbjct 24408 GCACGAACTTGGTACAAAAAGGGATACTGTGGTGACGTGAAAGGTGTGGATCTGGTGCTT 24467 Query 6600 GTAGGTCACACACCTACTGACCGATCTAAACAAGAACGCTTGGGTAACATGGTGTTCGCT 6659 ||||||||||| || | | | || | | || |||||| ||||| | Sbjct 24468 TGTGGTCACACACCAACCAAGTCGGGTGATGTCGAGCAATACGGAAACATGATGTTCTGT 24527 Query 6660 GATTCAGGATGCCACTGGACTGATCGTATCAATCTGATCGAAATCACTGAACAATTCGT 6718 ||| ||||| ||||| || ||||| ||||| ||||||| ||| |||| || Sbjct 24528 GATGGAGGATCTGTCTGGAACGACAACATCAACCTGATTGAAATCAATGACGAATTTGT 24586 Score = 91.5 bits (100), Expect = 2e-14 Identities = 160/233 (69%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 891 AACAAAGGTCGGTTGATCCCAACAGGTATCGACACTGAAAATTTCGATGATGAAACATTC 950 |||||||| || |||||||| | ||||||| || ||||| || ||| ||| Sbjct 17638 AACAAAGGCCGTCTGATCCCAGCGAACGTCGACACCGAGCATTTCACAGAAGAAGAGTTC 17697 Query 951 GAAACATATGAGGAAAACGGGTTCGTTGTAATCGATCGTGAAATCTACAAACCTGAGTTT 1010 |||||||| ||||| ||||| ||||||| || || |||| ||||| || |||| Sbjct 17698 GAAACATACGAGGAGAACGGCTTCGTTGCCATTGACGGTGAGATCTATGAAGTAGAGTGG 17757 Query 1011 GAAGTATACCGTTGTGAAGATGAAGGTTTCTCATATGTCGATGTTGATGAAAAGGGTGTT 1070 || | | || ||||| | | | |||| | || || || | | || || ||||| Sbjct 17758 GAGATCAAGCGAGGTGAACTTTATGATTTCGCGTACGTTGACGAAAAAGACAACGGTGTG 17817 Query 1071 ATCCACTTTCATACTCAACATTATAATGGTGGTGGTCATTGGACTGAAGTTGT 1123 ||| | || | || | || || ||||| |||||||| ||||| ||||| || Sbjct 17818 ATCGAATTCAACACCTATCACTACAATGGCGGTGGTCACTGGACGGAAGTCGT 17870 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 84641806361750