Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_031903.1 Length=172345 Score E Sequences producing significant alignments: (Bits) Value seq37374 583 1e-161 seq6 232 7e-56 seq9 156 5e-33 seq5 100 3e-16 seq8 98.7 1e-15 seq456 82.4 8e-11 >seq37374 Length=151683 Score = 583 bits (646), Expect = 1e-161 Identities = 723/987 (73%), Gaps = 2/987 (0%) Strand=Plus/Minus Query 159803 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTCCTG 159862 ||||| | ||| |||| ||| | || || || || | || ||||| || || || Sbjct 4312 TTCTGTAATTGGATAACCAGCACCGAAAATCGTCTTTACATTGGATGGTTTGGTGTTTTG 4253 Query 159863 ATGATCCCAACTCTGTTGGCAGCAACTATCTGC-TTCATCGTCGCCTTCATCGCTGCTCC 159921 ||||| || ||| | ||| | |||||| |||| || || |||| || |||||||| || Sbjct 4252 ATGATTCCTACTTTATTGACTGCAACT-TCTGTATTTATTATCGCTTTTATCGCTGCCCC 4194 Query 159922 CCCTGTGGACATCGATGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTACGGTAACAA 159981 || || || || ||||| || ||||| || || |||| || || | || || ||||| Sbjct 4193 TCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTATGGAAACAA 4134 Query 159982 CATCATCTCTGGTGCAGTTGTTCCCTCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 160041 ||||| |||||||| || |||| |||| || || ||| | || || ||||| || Sbjct 4133 TATCATTTCTGGTGCGATTATTCCTACTTCTGCGGCTATAGGTTTGCATTTTTATCCGAT 4074 Query 160042 TTGGGAAGCCGCATCGCTCGACGAGTGGCTCTATAACGGTGGTCCTTTCCAACTCGTAGT 160101 |||||||| || || | || || ||| | || ||||| ||||||| |||| | || Sbjct 4073 ATGGGAAGCAGCTTCTGTTGATGAATGGTTATACAACGGCGGTCCTTATGAACTAATTGT 4014 Query 160102 CTTCCACTTCCTGATCGGCATCTATGCCTATATGGGTCGTGAGTGGGAACTCTCTTACCG 160161 | |||||| | | || | | ||| |||||||||||||||||||| || || Sbjct 4013 TCTACACTTCTTACTTGGTGTAGCTTGCTACATGGGTCGTGAGTGGGAACTTAGTTTTCG 3954 Query 160162 TCTCGGTATGCGTCCCTGGATCTGTGTTGCATACTCTGCTCCAGTCGCTGCTGCTTCTGC 160221 ||| ||||||||||| ||||| ||||||||| || ||||| || || || ||| |||| Sbjct 3953 TCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCCGCTACTGC 3894 Query 160222 TGTATTCCTCGTCTACCCCTTCGGTCAGGGTTCTTTCTCCGATGCTATGCCTCTTGGTAT 160281 ||| ||| | |||| || | ||||| || || || |||| ||||||||| || || Sbjct 3893 TGTTTTCTTGATCTATCCTATTGGTCAAGGAAGCTTTTCGGATGGTATGCCTCTAGGAAT 3834 Query 160282 CTCTGGTACTTTTAACTATATGCTTGTATTCCAAGCAGAACACAATATCCTTATGCATCC 160341 ||||||||||| || | |||| ||||||| || || || || ||||| ||||||||||| Sbjct 3833 TTCTGGTACTTTCAATTTTATGATTGTATTTCAGGCTGAGCATAATATTCTTATGCATCC 3774 Query 160342 GTTCCACATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTGTTCTCTGCTATGCATGG 160401 || |||||| | ||||| ||||| |||||||| || || || ||| |||||||||||| Sbjct 3773 ATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGG 3714 Query 160402 ATCTCTGGTTACTTCTAGTCTCGTCAGAGAGACGACAGAAACTGAGTCCCAGAACTATGG 160461 || |||| ||||||||| | |||| || || ||||||| ||| ||| || | || Sbjct 3713 TTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCCGCTAATGAAGG 3654 Query 160462 TTACAAGTTCGGTCAAGAGGAAGAGACTTACAACATCGTCGCAGCACATGGCTACTTCGG 160521 ||||| || |||||||||||||| ||||| || || || || || ||||| || || || Sbjct 3653 TTACAGATTTGGTCAAGAGGAAGAAACTTATAATATTGTAGCTGCTCATGGTTATTTTGG 3594 Query 160522 TCGTTTGATCTTCCAATATGCATCCTTTAACAACTCACGCTCTCTGCACTTCTTCCTCGC 160581 || |||||||||||||||||| || ||||| || || ||| | || |||||||| || Sbjct 3593 CCGATTGATCTTCCAATATGCAAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTAGC 3534 Query 160582 TGCTTGGCCTGTTGTTGGAATCTGGTTCACTGCCCTTGGTGTTTCTACCATGGCATTCAA 160641 |||||||||||| || || || ||||| || || | ||| | || ||||| ||||| Sbjct 3533 TGCTTGGCCTGTAGTAGGTATTTGGTTTACCGCTTTAGGTATCAGCACTATGGCTTTCAA 3474 Query 160642 TCTCAATGGTTTCAACTTCAACCAGTCCATCTTGGACAACCAAGGACAAGTTCTGAACAC 160701 | |||||||| || |||||||| ||| | | || | ||||| | || | || || Sbjct 3473 CTTAAATGGTTTTAATTTCAACCAATCCGTAGTTGATAGTCAAGGTCGTGTAATAAATAC 3414 Query 160702 TTGGGCAGACGTGCTTAACCGCGCTGGTCTGGGCATGGAAGTCATGCACGAGCGTAACGC 160761 ||||| || | ||||||| ||| || || |||||||| ||||| || ||||| || Sbjct 3413 CTGGGCTGATATTATTAACCGAGCTAACCTTGGTATGGAAGTAATGCATGAACGTAATGC 3354 Query 160762 TCACAACTTCCCTCTCGACCTTGCTGC 160788 ||| || |||||||| || || ||||| Sbjct 3353 TCATAATTTCCCTCTAGATCTAGCTGC 3327 Score = 536 bits (594), Expect = 1e-147 Identities = 721/994 (73%), Gaps = 7/994 (1%) Strand=Plus/Minus Query 161545 GATCGTTTCGTTTTTGTTGGCTGGTCTGGACTTCTTCTTTTTCCCACTGCTTATCTTGCT 161604 || |||||||||||||| || ||||| || || | || ||||| || ||| | || Sbjct 31131 GACCGTTTCGTTTTTGTGGGTTGGTCCGGTCTATTACTCTTTCCTTGCGCCTATTTCGCC 31072 Query 161605 ATTGGCGGTTGGCTTACTGGCACGACTTTCGCTACGAGCTGGTATACCCATGGACTCGCT 161664 | || |||||| |||| || ||||| || | || |||||||| || || | || Sbjct 31071 TTGGGGGGTTGGTTTACAGGTACGACCTTTGTAACTTCATGGTATACTCACGGCTTGGCA 31012 Query 161665 AGTTCCTATCTTGAGGG-TGCAAATTTTCTTACAGCGGCAGTTAGCACTCCAGCTGACGC 161723 ||||| ||| | || || ||||| || | | || || |||||| |||||| ||| | Sbjct 31011 AGTTCTTATTTAGAAGGCTGCAACTTCT-TAACCGCTGCAGTTTCCACTCCCGCTAATAG 30953 Query 161724 TATGGGTCATTCTCTTCTTCTT-CTCTGGGGTCCTGAGGCTCAAGGGGATTTCGTCAGGT 161782 | | | || ||| || || || || ||||||||||| || || || ||||| | | | Sbjct 30952 TTTAGCACACTCT-TTGTTGTTACTGTGGGGTCCTGAAGCACAGGGAGATTTTACCCGTT 30894 Query 161783 GGATCCAACTTGGGGGACTCTGGAATTTTGTGGCGCTCCACGGGGCTTTCGCTCTGATTG 161842 || || | || || || |||| |||||| || |||||||| ||||||| | || | Sbjct 30893 GGTGTCAGTTAGGTGGTCTGTGGACTTTTGTTGCTCTCCACGGTGCTTTCGGATTAATAG 30834 Query 161843 GATTCATGCTTCGTCAGTTTGAACTTGCTCG-TCTTATCGGTATCCGTCCTTACAATGCT 161901 | |||||| | ||||| |||||||||||||| ||| || | | || ||||| ||||| Sbjct 30833 GTTTCATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT-TGCGACCTTATAATGCA 30775 Query 161902 ATTGCTTTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTCTTTCTCATATATCCTCTGGGA 161961 || || ||||| ||||| |||||||||||||| || ||||| || ||||| ||||| Sbjct 30774 ATCGCATTCTCAGGTCCAATTGCTGTTTTTGTTTCTGTATTTCTTATTTATCCACTGGGT 30715 Query 161962 CAGTCGTCCTGGTTCTTCGCGCCATCGTTTGGGGTTGCCGCTATTTTCAGGTTCTTACTT 162021 ||||| |||||||| || || ||||| || || ||||| || | ||| | || Sbjct 30714 CAGTCTGGTTGGTTCTTTGCTCCTAGTTTTGGTGTAGCAGCTATATTTCGATTCATCCTC 30655 Query 162022 TTCCTACAAGGTTTCCACAATTGGACGCTTAATCCGTTCCACATGATGGGTGTCGCAGGT 162081 || | ||||| || || |||||||| | || || || || |||||||| || || ||| Sbjct 30654 TTTTTCCAAGGATTTCATAATTGGACATTAAACCCATTTCATATGATGGGAGTTGCTGGT 30595 Query 162082 ATCTTGGGTGGTGCTTTGCTCTCTGCTATTCACGGTGTGACTGTTGAAAACACGCTCTAC 162141 | ||||| | ||| | || | |||||||| |||| || || ||||| || | | Sbjct 30594 GTATTGGGCGCTGCACTACTATGCGCTATTCATGGTGCAACCGTAGAAAATACTTTATTT 30535 Query 162142 CAAGATGGTGAACAAGCAAATACTTTCAAGGCTTTTGACTCTACGCAAGAGGAGGAGACT 162201 |||||||||| |||||||| ||| |||||| || | || |||| || || ||| Sbjct 30534 GAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAACCCAAGCTGAAGAAACT 30475 Query 162202 TACTCGATGGTTACTGCGAACCGTTTCTGGTCACAGATCTTCGGTATTGCTTTTAGTAAT 162261 || || ||||||||||| || || || ||||| || ||||| || |||||||| ||| Sbjct 30474 TATTCAATGGTTACTGCTAATCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAAT 30415 Query 162262 AAGCGTTGGTTGCATTTCTTTATGCTCTTCGTTCCCGTCATGGGTCTCTGGACAAGTTCT 162321 || |||||||| |||||||||||| | || || || || | ||| | |||| ||| || Sbjct 30414 AAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACTGGTTTATGGATGAGTGCT 30355 Query 162322 ATCGGTATTATTGGACTCGCTCTTAATCTTCGTGCTTACGACTTTGTATCTCAGGAGATT 162381 | || | | || | || || || | |||||||| ||||| || ||||| || || Sbjct 30354 CTTGGGGTAGTCGGTTTGGCCCTGAACTTACGTGCTTATGACTTCGTTTCTCAAGAAATC 30295 Query 162382 CGTGCAGCGGAGGATCCTGAATTTGAAACCTTCTACACCAAGAATATCCTCTTGAATGAA 162441 || |||||||| |||||||||||||| || ||||||||||| ||||| ||||| || ||| Sbjct 30294 CGCGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTCTTAAACGAA 30235 Query 162442 GGTCTTCGTGCATGGTTGGCACCAGTTGATCAACCGCATGAGAACTTTGTATTCCCTGAG 162501 ||| ||||||| ||| ||||| | ||||| || ||||| ||| || ||||||||||| Sbjct 30234 GGTATTCGTGCGTGGATGGCAGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAG 30175 Query 162502 GAAGTTCTGCCTAGAGGTAACGCACTGTGAATGG 162535 || ||||| || | || ||||| || | ||||| Sbjct 30174 GAGGTTCTACCACGTGGAAACGCTCT-TTAATGG 30142 >seq6 Length=19356003 Score = 232 bits (256), Expect = 7e-56 Identities = 310/431 (72%), Gaps = 0/431 (0%) Strand=Plus/Plus Query 160357 TGTTGCTGGGGTATTCGGTGGATCTCTGTTCTCTGCTATGCATGGATCTCTGGTTACTTC 160416 ||| ||||| |||||||| || || || ||| | ||||| |||| || |||| ||||| Sbjct 3410773 TGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTACTATGGATGGTTCCTTGGTAACTTC 3410832 Query 160417 TAGTCTCGTCAGAGAGACGACAGAAACTGAGTCCCAGAACTATGGTTACAAGTTCGGTCA 160476 |||| | | || || || ||||||| ||| | || | |||||||| || ||||| Sbjct 3410833 TAGTTTGATAAGGGAAACCACAGAAAATGAATTTGCAAATGAAGGTTACAAATTTGGTCA 3410892 Query 160477 AGAGGAAGAGACTTACAACATCGTCGCAGCACATGGCTACTTCGGTCGTTTGATCTTCCA 160536 ||| ||||| ||||| || || || || || |||| ||| || || || ||||||||||| Sbjct 3410893 AGAAGAAGAAACTTATAATATTGTAGCTGCTCATGACTATTTTGGCCGATTGATCTTCCA 3410952 Query 160537 ATATGCATCCTTTAACAACTCACGCTCTCTGCACTTCTTCCTCGCTGCTTGGCCTGTTGT 160596 ||||||| || ||||| || || ||| | | |||||||| |||||||||||| | || Sbjct 3410953 ATATGCAAGTTTCAACAATTCTCGTTCTTTACGTTTCTTCCTAGCTGCTTGGCCTATAGT 3411012 Query 160597 TGGAATCTGGTTCACTGCCCTTGGTGTTTCTACCATGGCATTCAATCTCAATGGTTTCAA 160656 || || ||||| || || | ||| | || |||| ||||| | |||||||| || Sbjct 3411013 AGGTATTTGGTTTACCGCTTTAGGTATCAGCACTATGGTTTTCAACTTAAATGGTTTTAA 3411072 Query 160657 CTTCAACCAGTCCATCTTGGACAACCAAGGACAAGTTCTGAACACTTGGGCAGACGTGCT 160716 |||||||| ||| | | || | ||||| | || | || || ||||| || | | Sbjct 3411073 TTTCAACCAATCCGTAATTGATAGTCAAGGTCGTGTAATAAATACCTGGGCTGATATTAT 3411132 Query 160717 TAACCGCGCTGGTCTGGGCATGGAAGTCATGCACGAGCGTAACGCTCACAACTTCCCTCT 160776 |||||| ||| || || |||||||| ||| | || ||||| ||||| || || ||| | Sbjct 3411133 TAACCGAGCTAACCTTGGTATGGAAGTAATGTATGAACGTAATGCTCATAATTTGCCTTT 3411192 Query 160777 CGACCTTGCTG 160787 || | |||| Sbjct 3411193 AGATTTAGCTG 3411203 >seq9 Length=31747250 Score = 156 bits (172), Expect = 5e-33 Identities = 215/301 (71%), Gaps = 0/301 (0%) Strand=Plus/Minus Query 161971 TGGTTCTTCGCGCCATCGTTTGGGGTTGCCGCTATTTTCAGGTTCTTACTTTTCCTACAA 162030 |||||||| || || ||||| || || ||||| || | ||| | || || | ||| Sbjct 26587590 TGGTTCTTTGCTCCTAGTTTTGGTGTAGCAGCTATATTTCGATTCATCCTCTTTTTCCAA 26587531 Query 162031 GGTTTCCACAATTGGACGCTTAATCCGTTCCACATGATGGGTGTCGCAGGTATCTTGGGT 162090 || || || |||||||| | || || || || |||||||| || || ||| | ||||| Sbjct 26587530 GGATTTCATAATTGGACATTAAACCCATTTCATATGATGGGAGTTGCTGGTGTATTGGGC 26587471 Query 162091 GGTGCTTTGCTCTCTGCTATTCACGGTGTGACTGTTGAAAACACGCTCTACCAAGATGGT 162150 | ||| | || | |||||||| |||| || || ||||| || | | |||||||| Sbjct 26587470 GCTGCACTACTATGCGCTATTCATGGTGCAACCGTAGAAAATACTTTATTTGAAGATGGT 26587411 Query 162151 GAACAAGCAAATACTTTCAAGGCTTTTGACTCTACGCAAGAGGAGGAGACTTACTCGATG 162210 || |||||||| ||| |||||| || | || |||| || | ||||| || ||| Sbjct 26587410 GATGGTGCAAATACATTCTGTGCTTTTAACCCAACCCAAGCTGAAAAAACTTATTCAATG 26587351 Query 162211 GTTACTGCGAACCGTTTCTGGTCACAGATCTTCGGTATTGCTTTTAGTAATAAGCGTTGG 162270 |||||||| || || || ||||| || ||||| || |||||||| ||||| |||||| Sbjct 26587350 GTTACTGCTAATCGCTTTTGGTCCCAAATCTTTGGGTTTGCTTTTTCCAATAAACGTTGG 26587291 Query 162271 T 162271 | Sbjct 26587290 T 26587290 >seq5 Length=30687117 Score = 100 bits (110), Expect = 3e-16 Identities = 115/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 160460 GGTTACAAGTTCGGTCAAGAGGAAGAGACTTACAACATCGTCGCAGCACATGGCTACTTC 160519 ||||||| || |||||||||||||| ||||| || || | | || ||||| || || Sbjct 28538743 GGTTACAGATTTGGTCAAGAGGAAGAAACTTATAATATTGAAACTGCTCATGGTTATTTT 28538802 Query 160520 GGTCGTTTGATCTTCCAATATGCATCCTTTAACAACTCACGCTCTCTGCACTTCTTCCTC 160579 || || ||||||||||||||| || || || | | || | | | || ||||| || Sbjct 28538803 GGCCGATTGATCTTCCAATATACAAGTTTCAATAGTTTTCGTTTTTTACATTTCTTTCTA 28538862 Query 160580 GCTGCTTGGCCTGTTGTTGGAATCTGGTTCACTGC 160614 |||||||||||||| || || || ||||| || || Sbjct 28538863 GCTGCTTGGCCTGTAGTAGGTATTTGGTTTACCGC 28538897 >seq8 Length=30791815 Score = 98.7 bits (108), Expect = 1e-15 Identities = 135/189 (71%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 160960 GATGATCAATATGTCCTTGACGCTGCTGATGAAGCAGGTGTTGACGGACCCTACTCCTGT 161019 |||||| || |||| || || || || || || || ||||| || ||||| || Sbjct 23181339 GATGATACTTACATCCTAGATGCAGCAGAGGATGCTGGAGTTGAACTTCCTTACTCGTGC 23181280 Query 161020 CGTGCTGGTGCTTGCTCTACTTGTGCTGGTAAGATTGAGAGTGGTACTGTAGATCAATCT 161079 ||||| || |||||||||||||||||||| ||||||| |||| | || ||||| ||| Sbjct 23181279 CGTGCGGGAGCTTGCTCTACTTGTGCTGGGAAGATTGTTTCTGGTTCAGTGGATCAGTCT 23181220 Query 161080 GATCAATCTTTCCTGGATGATGATCAACTTGAATCAGGATTTGTCCTGACCTGCGTTGCT 161139 ||| || ||||| ||||| | ||| | | ||| ||| | || ||||| || | Sbjct 23181219 GATGGCTCATTCCTTGATGACAACCAAATGAAGGAAGGCTTTCTACTTACCTGTGTCTCC 23181160 Query 161140 TATCCCACT 161148 ||||| ||| Sbjct 23181159 TATCCAACT 23181151 >seq456 Length=558995 Score = 82.4 bits (90), Expect = 8e-11 Identities = 74/93 (80%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 160514 TACTTCGGTCGTTTGATCTTCCAATATGCATCCTTTAACAACTCACGCTCTCTGCACTTC 160573 || || || || |||||||||||||||||| || ||||| || || ||| | || ||| Sbjct 484669 TATTTTGGCCGATTGATCTTCCAATATGCAAGTTTCAACAATTCTCGTTCTTTACATTTC 484728 Query 160574 TTCCTCGCTGCTTGGCCTGTTGTTGGAATCTGG 160606 ||||| |||||||||||||| || || || ||| Sbjct 484729 TTCCTAGCTGCTTGGCCTGTAGTAGGTATTTGG 484761 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 551118404025000