Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_031922.1 Length=174830 Score E Sequences producing significant alignments: (Bits) Value seq37374 646 1e-180 seq6 264 1e-65 seq9 217 2e-51 seq5 100 3e-16 >seq37374 Length=151683 Score = 646 bits (716), Expect = 1e-180 Identities = 723/961 (75%), Gaps = 4/961 (0%) Strand=Plus/Minus Query 160599 AATCGTCTTTACGTCGGTTGGTTCGGTGTGCTGATGATCCCAACTCTGTTGGCAGCAACC 160658 |||||||||||| | || ||||| ||||| ||||||| || ||| | ||| | ||||| Sbjct 4285 AATCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATTCCTACTTTATTGACTGCAACT 4226 Query 160659 GTCTGC-TTTATTACTGCGTTCGTTGCTGCTCCCCCCGTGGACATCGACGGTATCCGTGA 160717 |||| ||||||| || || | ||||| || || || || || || ||||| ||||| Sbjct 4225 -TCTGTATTTATTATCGCTTTTATCGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGA 4167 Query 160718 ACCCGTTGCTGGTTCACTGATGTATGGAAACAACATCATCTCTGGTGCAGTTGTTCCTTC 160777 || ||| |||| || || | ||||||||||| ||||| |||||||| || ||||| | Sbjct 4166 GCCTGTTTCTGGATCTCTACTTTATGGAAACAATATCATTTCTGGTGCGATTATTCCTAC 4107 Query 160778 TTCCAACGCAATTGGTCTTCACTTCTACCCCATTTGGGAAGCTGCATCTCTTGATGAATG 160837 ||| || || ||| | || || || || || |||||||| || ||| |||||||||| Sbjct 4106 TTCTGCGGCTATAGGTTTGCATTTTTATCCGATATGGGAAGCAGCTTCTGTTGATGAATG 4047 Query 160838 GCTCTACAATGGTGGTCCTTACCAACTGGTCGTATTTCACTTCCTGATCGGCATCTTCTG 160897 | | ||||| || |||||||| |||| | || | |||||| | | || | || Sbjct 4046 GTTATACAACGGCGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTG 3987 Query 160898 CTACATGGGTCGCGAGTGGGAACTTTCCTACCGCCTCGGCATGCGCCCCTGGATCTGC-G 160956 |||||||||||| |||||||||||| | || || || ||||| || ||||| ||| | Sbjct 3986 CTACATGGGTCGTGAGTGGGAACTTAGTTTTCGTCTGGGTATGCGTCCTTGGAT-TGCTG 3928 Query 160957 TTGCATATTCTGCACCTGTTGCTGCTGCGAGTGCAGTATTCCTCGTCTATCCTTTCGGTC 161016 |||||||||| || |||||||| || || | ||| || ||| | |||||||| | |||| Sbjct 3927 TTGCATATTCAGCTCCTGTTGCAGCCGCTACTGCTGTTTTCTTGATCTATCCTATTGGTC 3868 Query 161017 AAGGTTCTTTCTCTGATGGTATGCCCCTGGGTATCTCTGGTACCTTCAACTTCATGCTTG 161076 |||| || || ||||||||||| || || || |||||||| ||||| || ||| ||| Sbjct 3867 AAGGAAGCTTTTCGGATGGTATGCCTCTAGGAATTTCTGGTACTTTCAATTTTATGATTG 3808 Query 161077 TCTTCCAGGCAGAACACAACATCCTGATGCACCCCTTCCACATGTTGGGTGTTGCTGGTG 161136 | || ||||| || || || || || ||||| || || |||||||| ||||| ||||||| Sbjct 3807 TATTTCAGGCTGAGCATAATATTCTTATGCATCCATTTCACATGTTAGGTGTAGCTGGTG 3748 Query 161137 TCTTCGGTGGTTCTCTGTTCTCCGCAATGCATGGTTCACTGGTTACTTCTTCCCTGGTTC 161196 | ||||| || || || ||| || ||||||||||| |||| |||||| || | Sbjct 3747 TATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCA 3688 Query 161197 GTGAAACCACTGAGAACGAGTCCCAGAACTATGGTTACAAGTTTGGTCAAGAAGAAGAGA 161256 | |||||||| || || || ||| || | ||||||| ||||||||||| ||||| | Sbjct 3687 GGGAAACCACAGAAAATGAATCCGCTAATGAAGGTTACAGATTTGGTCAAGAGGAAGAAA 3628 Query 161257 CCTACAACATCGTCGCTGCTCATGGTTACTTCGGTCGCCTGATCTTCCAATACGCTTCCT 161316 | || || || || |||||||||||||| || || || ||||||||||||| || | Sbjct 3627 CTTATAATATTGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCAAGTT 3568 Query 161317 TCAACAACTCCCGTTCGTTGCACTTCTTCCTCGCAGCATGGCCTGTTGTCGGTATCTGGT 161376 ||||||| || ||||| || || |||||||| || || |||||||| || ||||| |||| Sbjct 3567 TCAACAATTCTCGTTCTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATTTGGT 3508 Query 161377 TCACTGCACTTGGTGTCTCCACCATGGCATTCAACCTGAACGGATTCAACTTCAACCAGT 161436 | || || | ||| || ||| ||||| |||||| | || || || || |||||||| | Sbjct 3507 TTACCGCTTTAGGTATCAGCACTATGGCTTTCAACTTAAATGGTTTTAATTTCAACCAAT 3448 Query 161437 CCATCATGGATGGTCAGGGCAAAGTCCTGAACACCTGGGCTGACGTTCTGAATCGTGCTA 161496 || | | ||| |||| || || | || ||||||||||| || | || || |||| Sbjct 3447 CCGTAGTTGATAGTCAAGGTCGTGTAATAAATACCTGGGCTGATATTATTAACCGAGCTA 3388 Query 161497 ACCTTGGTATGGAAGTAATGCACGAGCGTAATGCTCACAACTTCCCTCTGGATCTCGCTG 161556 |||||||||||||||||||||| || ||||||||||| || |||||||| ||||| |||| Sbjct 3387 ACCTTGGTATGGAAGTAATGCATGAACGTAATGCTCATAATTTCCCTCTAGATCTAGCTG 3328 Query 161557 C 161557 | Sbjct 3327 C 3327 Score = 504 bits (558), Expect = 8e-138 Identities = 706/988 (71%), Gaps = 2/988 (0%) Strand=Plus/Minus Query 163917 GATCGCTTTGTCTTTGTGGGTTGGTCTGGATTACTTCTTTTTCCCACTGCTTATCTTGCA 163976 || || || || |||||||||||||| || || | || ||||| || ||| | || Sbjct 31131 GACCGTTTCGTTTTTGTGGGTTGGTCCGGTCTATTACTCTTTCCTTGCGCCTATTTCGCC 31072 Query 163977 ATTGGTGGCTGGCTTACTGGTACAACGTTTGTTACCAGTTGGTACACCCACGGTCTCGCG 164036 | || || ||| |||| ||||| || ||||| || ||||| || ||||| | || Sbjct 31071 TTGGGGGGTTGGTTTACAGGTACGACCTTTGTAACTTCATGGTATACTCACGGCTTGGCA 31012 Query 164037 TCTAGTTACCTTGAGGG-TGCTAATTTCCTTACAGCGGCTGTGTCAACGCCTGCTGATGC 164095 | ||| | || || ||| || ||| | || || || || || || || ||| || Sbjct 31011 AGTTCTTATTTAGAAGGCTGC-AACTTCTTAACCGCTGCAGTTTCCACTCCCGCTAATAG 30953 Query 164096 TATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTCAGGGGGACTTCATTAGGTG 164155 | | | || ||| | | |||| ||||||||||| | ||||| || || | | || Sbjct 30952 TTTAGCACACTCTTTGTTGTTACTGTGGGGTCCTGAAGCACAGGGAGATTTTACCCGTTG 30893 Query 164156 GTGCCAACTTGGGGGACTCTGGGCTTTTGTGGCGTTCCACGGATCTTTCGCTCTGATCGG 164215 ||| || | || || || ||| ||||||| || ||||||| |||||| | || || Sbjct 30892 GTGTCAGTTAGGTGGTCTGTGGACTTTTGTTGCTCTCCACGGTGCTTTCGGATTAATAGG 30833 Query 164216 TTTCATGCTTCGGCAGTTTGAAATTGCACGTCTTGTAGGTATCCGTCCGTACAATGCTAT 164275 ||||||| | || || |||||| |||| || ||| | || || || ||||| || Sbjct 30832 TTTCATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAATTGCGACCTTATAATGCAAT 30773 Query 164276 TGCGTTCTCTGGTCCGATTGCTGTCTTTGTCAGCGTTTTCCTTATGTACCCTCTCGGGCA 164335 || ||||| ||||| |||||||| ||||| || || ||||| || || || || || Sbjct 30772 CGCATTCTCAGGTCCAATTGCTGTTTTTGTTTCTGTATTTCTTATTTATCCACTGGGTCA 30713 Query 164336 ATCTAGTTGGTTCTTTGCCCCCTCGTTTGGGGTCGCGGCGATCTTCAGATTCCTCTTGTT 164395 ||| ||||||||||||| || ||||| || || || || || ||||| || | || Sbjct 30712 GTCTGGTTGGTTCTTTGCTCCTAGTTTTGGTGTAGCAGCTATATTTCGATTCATCCTCTT 30653 Query 164396 CCTCCAAGGTTTCCATAACTGGACACTCAACCCCTTCCATATGATGGGTGTTGCAGGCAT 164455 ||||||| || ||||| |||||| | ||||| || ||||||||||| ||||| || | Sbjct 30652 TTTCCAAGGATTTCATAATTGGACATTAAACCCATTTCATATGATGGGAGTTGCTGGTGT 30593 Query 164456 CCTTGGTGGTGCTCTTCTCTGTGCTATTCATGGTGCTACCGTAGAGAATACTTTGTTTGA 164515 | || | ||| || || || |||||||||||||| |||||||| |||||||| ||||| Sbjct 30592 ATTGGGCGCTGCACTACTATGCGCTATTCATGGTGCAACCGTAGAAAATACTTTATTTGA 30533 Query 164516 AGATGGTGAACAATCAAATACTTTCAAGGCATTCGAGCCTACTCAAGAGGAAGAGACTTA 164575 ||||||||| ||||||| ||| || || | || || |||| ||||| ||||| Sbjct 30532 AGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAACCCAAGCTGAAGAAACTTA 30473 Query 164576 CTCGATGGTCACTGCCAACCGCTTCTGGTCTCAGATTTTTGGTATTGCTTTCAGCAATAA 164635 || ||||| ||||| || ||||| ||||| || || ||||| ||||||| |||||| Sbjct 30472 TTCAATGGTTACTGCTAATCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAA 30413 Query 164636 GCGTTGGTTGCACTTCTTTATGCTCTTTGTTCCTGTCATGGGACTTTGGACAAGTTCTAT 164695 |||||||| || ||||||||| | ||||| || || | || | |||| ||| || | Sbjct 30412 ACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACTGGTTTATGGATGAGTGCTCT 30353 Query 164696 TGGTATCATCGGTCTCGCACTCAATCTTCGTGCTTATGATTTTGTGTCTCAGGAGATTAG 164755 ||| | ||||| | || || || | ||||||||||| || || ||||| || || | Sbjct 30352 TGGGGTAGTCGGTTTGGCCCTGAACTTACGTGCTTATGACTTCGTTTCTCAAGAAATCCG 30293 Query 164756 AGCAGCAGAGGATCCTGAATTTGAGACGTTCTATACGAAGAACATCCTCCTCAATGAAGG 164815 ||||| || ||||||||||||||||| ||||| || || || || ||| | || ||||| Sbjct 30292 CGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTCTTAAACGAAGG 30233 Query 164816 ACTCCGTGCCTGGATGGCTCCAGTAGACCAGCCACACGAATCGTTTGTATTTCCAGAGGA 164875 | ||||| |||||||| | ||| ||||| || ||| || |||| || ||||| Sbjct 30232 TATTCGTGCGTGGATGGCAGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGA 30173 Query 164876 AGTTCTTCCGAGAGGTAACGCACTCTAA 164903 ||||| || | || ||||| || ||| Sbjct 30172 GGTTCTACCACGTGGAAACGCTCTTTAA 30145 >seq6 Length=19356003 Score = 264 bits (292), Expect = 1e-65 Identities = 317/431 (74%), Gaps = 0/431 (0%) Strand=Plus/Plus Query 161126 TGTTGCTGGTGTCTTCGGTGGTTCTCTGTTCTCCGCAATGCATGGTTCACTGGTTACTTC 161185 ||| |||||||| ||||| || || || ||| | ||| ||||||| |||| ||||| Sbjct 3410773 TGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTACTATGGATGGTTCCTTGGTAACTTC 3410832 Query 161186 TTCCCTGGTTCGTGAAACCACTGAGAACGAGTCCCAGAACTATGGTTACAAGTTTGGTCA 161245 | || | | |||||||| || || || | || | |||||||| |||||||| Sbjct 3410833 TAGTTTGATAAGGGAAACCACAGAAAATGAATTTGCAAATGAAGGTTACAAATTTGGTCA 3410892 Query 161246 AGAAGAAGAGACCTACAACATCGTCGCTGCTCATGGTTACTTCGGTCGCCTGATCTTCCA 161305 ||||||||| || || || || || |||||||||| || || || || |||||||||| Sbjct 3410893 AGAAGAAGAAACTTATAATATTGTAGCTGCTCATGACTATTTTGGCCGATTGATCTTCCA 3410952 Query 161306 ATACGCTTCCTTCAACAACTCCCGTTCGTTGCACTTCTTCCTCGCAGCATGGCCTGTTGT 161365 ||| || |||||||| || ||||| || | |||||||| || || |||||| | || Sbjct 3410953 ATATGCAAGTTTCAACAATTCTCGTTCTTTACGTTTCTTCCTAGCTGCTTGGCCTATAGT 3411012 Query 161366 CGGTATCTGGTTCACTGCACTTGGTGTCTCCACCATGGCATTCAACCTGAACGGATTCAA 161425 ||||| ||||| || || | ||| || ||| |||| |||||| | || || || || Sbjct 3411013 AGGTATTTGGTTTACCGCTTTAGGTATCAGCACTATGGTTTTCAACTTAAATGGTTTTAA 3411072 Query 161426 CTTCAACCAGTCCATCATGGATGGTCAGGGCAAAGTCCTGAACACCTGGGCTGACGTTCT 161485 |||||||| ||| | || ||| |||| || || | || ||||||||||| || | Sbjct 3411073 TTTCAACCAATCCGTAATTGATAGTCAAGGTCGTGTAATAAATACCTGGGCTGATATTAT 3411132 Query 161486 GAATCGTGCTAACCTTGGTATGGAAGTAATGCACGAGCGTAATGCTCACAACTTCCCTCT 161545 || || |||||||||||||||||||||||| | || ||||||||||| || || ||| | Sbjct 3411133 TAACCGAGCTAACCTTGGTATGGAAGTAATGTATGAACGTAATGCTCATAATTTGCCTTT 3411192 Query 161546 GGATCTCGCTG 161556 ||| | |||| Sbjct 3411193 AGATTTAGCTG 3411203 >seq9 Length=31747250 Score = 217 bits (240), Expect = 2e-51 Identities = 236/313 (75%), Gaps = 0/313 (0%) Strand=Plus/Minus Query 164331 GGGCAATCTAGTTGGTTCTTTGCCCCCTCGTTTGGGGTCGCGGCGATCTTCAGATTCCTC 164390 || || ||| ||||||||||||| || ||||| || || || || || ||||| || Sbjct 26587602 GGTCAGTCTGGTTGGTTCTTTGCTCCTAGTTTTGGTGTAGCAGCTATATTTCGATTCATC 26587543 Query 164391 TTGTTCCTCCAAGGTTTCCATAACTGGACACTCAACCCCTTCCATATGATGGGTGTTGCA 164450 | || ||||||| || ||||| |||||| | ||||| || ||||||||||| ||||| Sbjct 26587542 CTCTTTTTCCAAGGATTTCATAATTGGACATTAAACCCATTTCATATGATGGGAGTTGCT 26587483 Query 164451 GGCATCCTTGGTGGTGCTCTTCTCTGTGCTATTCATGGTGCTACCGTAGAGAATACTTTG 164510 || | | || | ||| || || || |||||||||||||| |||||||| |||||||| Sbjct 26587482 GGTGTATTGGGCGCTGCACTACTATGCGCTATTCATGGTGCAACCGTAGAAAATACTTTA 26587423 Query 164511 TTTGAAGATGGTGAACAATCAAATACTTTCAAGGCATTCGAGCCTACTCAAGAGGAAGAG 164570 |||||||||||||| ||||||| ||| || || | || || |||| ||| | Sbjct 26587422 TTTGAAGATGGTGATGGTGCAAATACATTCTGTGCTTTTAACCCAACCCAAGCTGAAAAA 26587363 Query 164571 ACTTACTCGATGGTCACTGCCAACCGCTTCTGGTCTCAGATTTTTGGTATTGCTTTCAGC 164630 ||||| || ||||| ||||| || ||||| ||||| || || ||||| ||||||| | Sbjct 26587362 ACTTATTCAATGGTTACTGCTAATCGCTTTTGGTCCCAAATCTTTGGGTTTGCTTTTTCC 26587303 Query 164631 AATAAGCGTTGGT 164643 ||||| ||||||| Sbjct 26587302 AATAAACGTTGGT 26587290 Score = 84.2 bits (92), Expect = 2e-11 Identities = 131/184 (71%), Gaps = 5/184 (3%) Strand=Plus/Plus Query 50081 GATGAAGACACTTCGATTTTGGATGCTGCAGAAGAACAAGGCGTAGACATCAATTATTCT 50140 |||||||| || ||| | ||||||||||||||||||||| | ||| | ||||| Sbjct 31530592 GATGAAGA---TTACATTCTTGATGCTGCAGAAGAACAAGGCCTTGACCTTCCCTATTCA 31530648 Query 50141 TGTCGTGCAGGAGCATGTTCCTCTTGTGCTGGTAAAATCATTGAGGGTACTGTTGACCAG 50200 || | || || || ||||| || |||| ||| ||| | | || | || |||||| Sbjct 31530649 TGCAGGGCTGGTGCCTGTTCTTCCTGTGTTGGAAAAGTTGTGTCTGGCAAAGTGGACCAG 31530708 Query 50201 GAAGATCAAT-CATTTCTTGATGATGATCAACTTGAAGCTGGTTTTGTCTTGACATGTGT 50259 ||| |||| || |||||||| || ||||||||||| || ||||| | || ||| | Sbjct 31530709 ACAGA-CAATAGCTTCCTTGATGACGACCAACTTGAAGCAGGATTTGTTCTCACCTGTAT 31530767 Query 50260 AGCT 50263 ||| Sbjct 31530768 TGCT 31530771 >seq5 Length=30687117 Score = 100 bits (110), Expect = 3e-16 Identities = 115/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 161229 GGTTACAAGTTTGGTCAAGAAGAAGAGACCTACAACATCGTCGCTGCTCATGGTTACTTC 161288 ||||||| ||||||||||| ||||| || || || || | ||||||||||||| || Sbjct 28538743 GGTTACAGATTTGGTCAAGAGGAAGAAACTTATAATATTGAAACTGCTCATGGTTATTTT 28538802 Query 161289 GGTCGCCTGATCTTCCAATACGCTTCCTTCAACAACTCCCGTTCGTTGCACTTCTTCCTC 161348 || || ||||||||||||| | ||||| | | |||| || || ||||| || Sbjct 28538803 GGCCGATTGATCTTCCAATATACAAGTTTCAATAGTTTTCGTTTTTTACATTTCTTTCTA 28538862 Query 161349 GCAGCATGGCCTGTTGTCGGTATCTGGTTCACTGC 161383 || || |||||||| || ||||| ||||| || || Sbjct 28538863 GCTGCTTGGCCTGTAGTAGGTATTTGGTTTACCGC 28538897 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 559066688950000