Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20radiata_20var._20radiata_20[refseq_20GCF_5F000741045.1_20201 5-10-28] 2,499 sequences; 463,637,892 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq2122 170 4e-40 seq2498 75.2 2e-11 seq2499 73.4 8e-11 >seq2122 Length=2452 Score = 170 bits (188), Expect = 4e-40 Identities = 233/324 (72%), Gaps = 6/324 (2%) Strand=Plus/Minus Query 11 AGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATTCG 70 ||||| |||||||||| |||||| ||| || ||||| | || ||||| || | ||| Sbjct 653 AGGGGAGTGAAATAGATCCTGAAACCGTATGCATACAAACAGTAGGAGCGGACTTGTTCC 594 Query 71 GTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGG 130 ||||| |||| ||||||| |||||| | | ||| ||| ||| || || |||| Sbjct 593 GTGACTGCGTACCTTTTGTATAATGGGTCAGCGACTTACAT-TCAGTGGCAAGCTTAACC 535 Query 131 GCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCGC 190 | | || || || || ||||||||| | || |||||| ||| | ||| Sbjct 534 GAATAGGGA-----AGGCGTAGCGAAAGCGAGTCCGAATAGGGCGTTCAGTCGCTGGGTG 480 Query 191 TAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGG 250 ||||| ||||||| ||||||| ||| | |||||||||| | ||||||| |||| ||| Sbjct 479 TAGACCCGAAACCAGATGATCTATCCATGGCCAGGTTGAAGGCACGGTAACACGTGCTGG 420 Query 251 AGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGC 310 ||||||||||| || |||||||| || |||||| | || |||||||||||||| Sbjct 419 AGGACCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGATAGGGGTGAAAGGC 360 Query 311 CAATCAAACTGGGAAATAGCTCGT 334 || |||| |||||||||| || Sbjct 359 TAAACAAATCTGGAAATAGCTGGT 336 >seq2498 Length=401262 Score = 75.2 bits (82), Expect = 2e-11 Identities = 103/143 (72%), Gaps = 1/143 (1%) Strand=Plus/Minus Query 193 GACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTC-GCGGTAACGCGTGATGGA 251 ||| ||||||| |||||| ||| ||||||||||||| || | || | |||| Sbjct 151758 GACCCGAAACCGATCGATCTAGCCATGAGCAGGTTGAAGAGAGCTCTCACAGGCCTTGGA 151699 Query 252 GGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGCC 311 |||||||||| | || | ||| | |||||||| | || ||||||||||||||| Sbjct 151698 GGACCGAACCCACGTATGTGGCAAAATACGGGGATGACTTGTGGCTAGGGGTGAAAGGCC 151639 Query 312 AATCAAACTGGGAAATAGCTCGT 334 || ||| | ||| |||||| || Sbjct 151638 AACCAAGATCGGAGATAGCTGGT 151616 >seq2499 Length=151271 Score = 73.4 bits (80), Expect = 8e-11 Identities = 168/248 (68%), Gaps = 5/248 (2%) Strand=Plus/Plus Query 72 TGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGGG 131 |||| |||||||| ||| | |||||||| ||| | | | | || || ||||||||| Sbjct 102775 TGACCGCGTGCCTGTTGAAGAATGAGCCGGCGACTCA-TAGGCAGTGGCTTGGTTAAGGG 102833 Query 132 CTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCGCT 191 | ||| ||||| || ||||||||| ||| | ||||| | || || | Sbjct 102834 AAACCA--CCGG-AGCCGTAGCGAAAGCGAGTCTTCATAGGGCAATT-GTCACTGCTTAT 102889 Query 192 AGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGGA 251 ||| |||| | |||||||| ||| || |||| ||||| ||| | | |||| Sbjct 102890 GGACCCGAACCTGGGTGATCTATCCATGACCAGGATGAAGCTTGGGTGAAACTAAGTGGA 102949 Query 252 GGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGCC 311 || |||||||| | |||||| | | ||||||| | | || ||||||||||| ||| Sbjct 102950 GGTCCGAACCGACTGATGTTGAAGAATCAGCGGATGAGTTGTGGTTAGGGGTGAAATGCC 103009 Query 312 AATCAAAC 319 | || ||| Sbjct 103010 ACTCGAAC 103017 Score = 73.4 bits (80), Expect = 8e-11 Identities = 168/248 (68%), Gaps = 5/248 (2%) Strand=Plus/Minus Query 72 TGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGGG 131 |||| |||||||| ||| | |||||||| ||| | | | | || || ||||||||| Sbjct 129395 TGACCGCGTGCCTGTTGAAGAATGAGCCGGCGACTCA-TAGGCAGTGGCTTGGTTAAGGG 129337 Query 132 CTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCGCT 191 | ||| ||||| || ||||||||| ||| | ||||| | || || | Sbjct 129336 AAACCA--CCGG-AGCCGTAGCGAAAGCGAGTCTTCATAGGGCAATT-GTCACTGCTTAT 129281 Query 192 AGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGGA 251 ||| |||| | |||||||| ||| || |||| ||||| ||| | | |||| Sbjct 129280 GGACCCGAACCTGGGTGATCTATCCATGACCAGGATGAAGCTTGGGTGAAACTAAGTGGA 129221 Query 252 GGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGCC 311 || |||||||| | |||||| | | ||||||| | | || ||||||||||| ||| Sbjct 129220 GGTCCGAACCGACTGATGTTGAAGAATCAGCGGATGAGTTGTGGTTAGGGGTGAAATGCC 129161 Query 312 AATCAAAC 319 | || ||| Sbjct 129160 ACTCGAAC 129153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 972775689728