Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20radiata_20var._20radiata_20[refseq_20GCF_5F000741045.1_20201 5-10-28] 2,499 sequences; 463,637,892 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq448 237 3e-60 seq1 80.6 5e-13 >seq448 Length=441671 Score = 237 bits (262), Expect = 3e-60 Identities = 207/254 (81%), Gaps = 3/254 (1%) Strand=Plus/Minus Query 66 CCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACAT 124 |||| || |||||||||| ||||||||||| |||||||| |||| |||| | |||||| Sbjct 341732 CCAGTGCTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGGATACAT 341673 Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184 |||||||| |||| | |||||| | | | ||||| |||||| | | ||| || || Sbjct 341672 TAGCATGGGATAACACCATAGGATTTT-GATCCTATTGTGTTGGCCTTTGGGATCGAAGT 341614 Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244 ||||||||| ||||| ||||||||| | ||||| || |||||||||||||||||||| Sbjct 341613 AATGATTAACAGGGACAGTCGGGGGCATTCGTATTTNATAGTCAGAGGTGAAATTCTTGG 341554 Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304 |||||| ||||| ||| ||||||||||| || |||||||||||||||||||||| || Sbjct 341553 ATTTATGAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGA 341495 Query 305 ACGAAAGTTAGGGG 318 ||||||||| |||| Sbjct 341494 ACGAAAGTTNGGGG 341481 >seq1 Length=36501346 Score = 80.6 bits (88), Expect = 5e-13 Identities = 78/98 (80%), Gaps = 2/98 (2%) Strand=Plus/Plus Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCT-CGAATACATTAGCAT 130 || |||||||||| |||||||||||||||||||| | || ||| || |||||||||||| Sbjct 8242892 CTGTTACTTTGAAGAAATTAGAGTGTTCAAAGCAAGTCTACGCTCCGGATACATTAGCAT 8242951 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGG 168 || |||| | | |||| | | | ||||| |||||| Sbjct 8242952 GGGATAACATCACAGGA-TTCTGATCCTATTGTGTTGG 8242988 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915177129152