Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20radiata_20var._20radiata_20[refseq_20GCF_5F000741045.1_20201 5-10-28] 2,499 sequences; 463,637,892 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq2499 215 1e-53 seq7 194 4e-47 seq2498 183 8e-44 seq1 159 9e-37 seq784 111 4e-22 seq8 107 5e-21 seq3 98.7 3e-18 seq6 89.7 1e-15 >seq2499 Length=151271 Score = 215 bits (238), Expect = 1e-53 Identities = 289/401 (72%), Gaps = 2/401 (0%) Strand=Plus/Plus Query 11 GAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTA 70 ||||||||| ||||||||| ||||||||||||||||||| || ||| ||||||||||| Sbjct 98725 GAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGCAAGCGTTA 98784 Query 71 ATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCC 130 |||||| | |||||||||||||| | ||| || | | |||| | || ||||||| Sbjct 98785 TCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTTCGCCGTCAAATCCC 98844 Query 131 CGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGGGGTG 190 ||||| |||| ||| || | | ||| | || |||| | || || | | Sbjct 98845 AGGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGGGGCAGAGG 98904 Query 191 GAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGCA 250 ||||| | ||| ||| |||||||||||||| || | | ||||||||| |||||| ||| Sbjct 98905 GAATTTCCGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACGGCGAAAGCA 98964 Query 251 GCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGAT 310 | ||||| |||||||| || | |||||||| ||||||| || ||||||||| Sbjct 98965 CTCTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCGAATGGGATTAGAT 99024 Query 311 ACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGGATTTACTTCCTTG-- 368 |||| ||||||| ||| |||||||| ||||| | || | | | || || Sbjct 99025 ACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGCGCTGTGCGTATCGACCCGTGCA 99084 Query 369 GTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 | ||||||||||||| |||| ||||||||||| ||| Sbjct 99085 ATGCTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTAC 99125 Score = 215 bits (238), Expect = 1e-53 Identities = 289/401 (72%), Gaps = 2/401 (0%) Strand=Plus/Minus Query 11 GAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTA 70 ||||||||| ||||||||| ||||||||||||||||||| || ||| ||||||||||| Sbjct 133445 GAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGCAAGCGTTA 133386 Query 71 ATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCC 130 |||||| | |||||||||||||| | ||| || | | |||| | || ||||||| Sbjct 133385 TCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTTCGCCGTCAAATCCC 133326 Query 131 CGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGGGGTG 190 ||||| |||| ||| || | | ||| | || |||| | || || | | Sbjct 133325 AGGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGGGGCAGAGG 133266 Query 191 GAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGCA 250 ||||| | ||| ||| |||||||||||||| || | | ||||||||| |||||| ||| Sbjct 133265 GAATTTCCGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACGGCGAAAGCA 133206 Query 251 GCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGAT 310 | ||||| |||||||| || | |||||||| ||||||| || ||||||||| Sbjct 133205 CTCTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCGAATGGGATTAGAT 133146 Query 311 ACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGGATTTACTTCCTTG-- 368 |||| ||||||| ||| |||||||| ||||| | || | | | || || Sbjct 133145 ACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGCGCTGTGCGTATCGACCCGTGCA 133086 Query 369 GTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 | ||||||||||||| |||| ||||||||||| ||| Sbjct 133085 ATGCTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTAC 133045 >seq7 Length=55601358 Score = 194 bits (214), Expect = 4e-47 Identities = 239/327 (73%), Gaps = 0/327 (0%) Strand=Plus/Plus Query 11 GAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTA 70 ||||||||| ||||||||| ||||||||||||||||||| || ||| ||||||||||| Sbjct 32534567 GAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGCAAGCGTTA 32534626 Query 71 ATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCC 130 |||||| | |||| ||||||||| | ||| || | | |||| | || ||||||| Sbjct 32534627 TCCGGAATGATTGGGTGTAAAGCGTCCATAGGTGGGTTTTTAAGTTCGCCGTCAAATCCC 32534686 Query 131 CGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGGGGTG 190 |||| |||| ||| || | | ||| | || |||| | || || | | Sbjct 32534687 ATGGCTAAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGGGGCAGAGG 32534746 Query 191 GAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGCA 250 ||||| | ||| |||||||||||| ||||| || | ||||||||| |||||| ||| Sbjct 32534747 GAATTTCCGGTGGAGCAGTGAAATGTGTAGAGATTGAAAAGAACACCAACGGCGAAAGCA 32534806 Query 251 GCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGAT 310 | ||||| |||||||| || | |||||||| ||||||| || ||||||||| Sbjct 32534807 CTCTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCGAATGGGATTAGAT 32534866 Query 311 ACCCTGGTAGTCCACGCCCTAAACGAT 337 |||| ||||||| ||| |||||||| Sbjct 32534867 ACCCCAGTAGTCCTAGCCGTAAACGAT 32534893 Score = 100 bits (110), Expect = 7e-19 Identities = 124/170 (73%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 168 CTAGAGTGTGTCAGAGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTG 227 ||||||| || || || | |||||| | ||| ||| |||||||||||||| || | Sbjct 3399104 CTAGAGTATGGTAGGGGCAGAGGGAATTTCCGGTGGAGCGGTGAAATGCGTAGAGATCGG 3399163 Query 228 GAGGAACACCAATGGCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGC 287 | ||||||||| | ||| ||| | |||| |||||||| || | |||||||| Sbjct 3399164 AAAGAACACCAACGATGAAAGCACTCTGTTGGGCCGACACTGACACTGAGAGACGAAAGC 3399223 Query 288 GTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGAT 337 ||||||| || ||||||||||||| ||||||| | | |||||||| Sbjct 3399224 TAGGGGAGCGAATGGGATTAGATACCCCAGTAGTCCTAGTCGTAAACGAT 3399273 Score = 87.8 bits (96), Expect = 5e-15 Identities = 68/81 (84%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 11 GAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTA 70 ||||||||| ||||||||| ||||||||||||||||||| || ||| ||||||||||| Sbjct 32590121 GAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGCAAGCGTTA 32590062 Query 71 ATCGGAATTACTGGGCGTAAA 91 |||||| | | ||||| || Sbjct 32590061 TCCGGAATGATTAGGCGTTAA 32590041 >seq2498 Length=401262 Score = 183 bits (202), Expect = 8e-44 Identities = 243/334 (73%), Gaps = 10/334 (3%) Strand=Plus/Minus Query 8 GAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCG 67 || ||| |||| |||||||||| |||||||||||||||||||| ||| ||| || || | Sbjct 124924 GAGGAAGAAGCCCCGGCTAACTCCGTGCCAGCAGCCGCGGTAAGACGGGGGGGGCGAGTG 124865 Query 68 TTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGT---TGTGTAAGACAGGTGTGA 124 || ||||||| ||||||||||||| | || ||||||| | | || || ||| Sbjct 124864 TTCTTCGGAATGACTGGGCGTAAAGGGCACGTAGGCGGTGAATCGGGTTGAAAG---TGA 124808 Query 125 AATCCCCGGGCTTAACCTGG-GAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAG 183 || | | | || |||| | | ||| | | || ||| ||||| | ||||| Sbjct 124807 AAGTCGC---CAAAAACTGGTGGAATGCTCTCGAAACCAATTCACTTGAGTGAGACAGAG 124751 Query 184 GGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGC 243 | | |||||||| | |||||| || |||| || | || | | |||||| |||| || Sbjct 124750 GAGAGTGGAATTTCGTGTGTAGGGGTTAAATCCGCAAATCTACGAAGGAACGCCAAAAGC 124691 Query 244 GAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGG 303 ||||||||| | ||||| || |||||| | ||||||| |||||||| ||| || Sbjct 124690 GAAGGCAGCTCTCTGGGTCCCTACCGACGCTGGAGTGCGAAAGCATGGGGAGCGAACGGG 124631 Query 304 ATTAGATACCCTGGTAGTCCACGCCCTAAACGAT 337 ||||||||||||||||||||| ||| |||||||| Sbjct 124630 ATTAGATACCCTGGTAGTCCATGCCGTAAACGAT 124597 >seq1 Length=36501346 Score = 159 bits (176), Expect = 9e-37 Identities = 231/324 (71%), Gaps = 2/324 (1%) Strand=Plus/Minus Query 11 GAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTA 70 ||||||||| || |||||| || ||||||||||||||| || ||| ||||||| ||| Sbjct 34744838 GAATAAGCATCGACTAACTCTATGGCAGCAGCCGCGGTAACACAGAGGATGCAAGCATTA 34744779 Query 71 ATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCC 130 |||||| | |||||||||||||| | ||| || | | |||| ||| ||||||| Sbjct 34744778 TCCGGAATGATTGGGCGTAAAGCGTNTGTAGGTGGCTTTTTAAGTTCCCTGTCAAATCCC 34744719 Query 131 CGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTG-TGTCAGAGGGGGGT 189 |||| |||| || || | | ||| | || |||| ||| || || Sbjct 34744718 AAGGCTCAACCATAGACAGGCGGTGGAAACTACCAAGCTGGAGTACTGT-AGGGGCAAAG 34744660 Query 190 GGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGC 249 |||||| | ||| ||| |||||||||||||| || | ||||||||| |||||| || Sbjct 34744659 GGAATTTCCGGTGGAGCGGTGAAATGCGTAGAGATCGAAAAGAACACCAACGGCGAAAGC 34744600 Query 250 AGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGA 309 | | ||||| || |||||| || | |||||||| ||||||| || |||||| | Sbjct 34744599 ACTCTGCTGGGCCAAGACTGACACTGAGAGACGAAAGCTAGGGGAGCGAATGGGATTAAA 34744540 Query 310 TACCCTGGTAGTCCACGCCCTAAA 333 ||||| ||||||| ||| |||| Sbjct 34744539 TACCCCAGTAGTCCTAGCCGTAAA 34744516 >seq784 Length=763859 Score = 111 bits (122), Expect = 4e-22 Identities = 103/131 (79%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 11 GAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTA 70 ||||||||| ||||||||| ||||||||||||||||||| || | | ||||||||||| Sbjct 140798 GAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGANGATGCAAGCGTTA 140857 Query 71 ATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCC 130 |||||| | |||||||||||||| | ||| | | | |||| | || ||||||| Sbjct 140858 TCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGACTTTTTAAGTTCGCCGTCAAATCCC 140917 Query 131 CGGGCTTAACC 141 ||||| |||| Sbjct 140918 AGGGCTCAACC 140928 >seq8 Length=45727239 Score = 107 bits (118), Expect = 5e-21 Identities = 106/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 10 AGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTT 69 |||||||||| |||||||| ||||||||||||||||||| || ||| |||||||||| Sbjct 31925572 AGAATAAGCATTGGCTAACTTTGTGCCAGCAGCCGCGGTAAGACAGAGGATGCAAGCGTT 31925631 Query 70 AATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCC 129 | |||||| | |||| ||||||||| ||| || | | |||| | || ||||| Sbjct 31925632 ATCCGGAATGATTGGGTGTAAAGCGTCTATAGGTGGCTTTTTAAGTTCGCCGTCAAATCT 31925691 Query 130 CCGGGCTTAACCTGGGA 146 | ||||| ||||| ||| Sbjct 31925692 CAGGGCTCAACCTTGGA 31925708 >seq3 Length=12950713 Score = 98.7 bits (108), Expect = 3e-18 Identities = 78/94 (83%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 2 ATACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTG 61 ||| | | |||||||||| ||||||||| |||||||||| |||||||| || ||| || Sbjct 3642622 ATATCCGGAGAATAAGCATCGGCTAACTCTGTGCCAGCAGTCGCGGTAAGACAAAGGATG 3642681 Query 62 CAAGCGTTAATCGGAATTACTGGGCGTAAAGCGT 95 ||||||||| |||||| | ||||| |||||||| Sbjct 3642682 CAAGCGTTATCCGGAATGATTGGGCTTAAAGCGT 3642715 >seq6 Length=37436759 Score = 89.7 bits (98), Expect = 1e-15 Identities = 103/139 (74%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 8 GAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCG 67 || ||||||||| ||||||||| ||||||||||| | |||| | ||| |||||| Sbjct 35248194 GAGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCTGTAGTAAGATAGAGGACACAAGCG 35248135 Query 68 TTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAAT 127 ||| | |||| |||||||||||||| | ||| || | | |||| | || |||| Sbjct 35248134 TTATCCAGAATGGTTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTTCGCCGTCAAAT 35248075 Query 128 CCCCGGGCTTAACCTGGGA 146 ||| ||||| ||||| ||| Sbjct 35248074 CCCAGGGCTCAACCTTGGA 35248056 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289567772896