Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20radiata_20var._20radiata_20[refseq_20GCF_5F000741045.1_20201 5-10-28] 2,499 sequences; 463,637,892 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq2499 342 1e-91 seq598 333 6e-89 seq2498 273 5e-71 seq1 197 3e-48 seq8 194 4e-47 seq11 167 5e-39 seq5 159 7e-37 seq4 141 2e-31 seq1976 129 1e-27 >seq2499 Length=151271 Score = 342 bits (378), Expect = 1e-91 Identities = 290/353 (82%), Gaps = 8/353 (2%) Strand=Plus/Minus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| | || | |||||||||||||| | ||||||||||||| |||||| Sbjct 104262 GCATCTTCACAGACATGTCTATTTCACCGAGTCTCTCTCCGAGACAGTGCCCAGATCGTT 104203 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 104202 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 104143 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGAT-TGCTC---TAACAG 182 ||||||||||||||||| || ||||||| || | ||| | | | || | || Sbjct 104142 TAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGTCGGCTCCCCTGTCATCAAGTCACCA 104083 Query 183 ATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTA 242 | |||| ||||||| |||| |||||||||||||| || |||||| ||||| |||||| Sbjct 104082 ACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTT 104023 Query 243 GCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCG---GCCTGTCA 299 || || ||||||||||||||||||||||||| |||||| || ||||| ||| | Sbjct 104022 GCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCTTTGT 103963 Query 300 TAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352 || |||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct 103962 GAG-GAGGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTA 103911 Score = 342 bits (378), Expect = 1e-91 Identities = 290/353 (82%), Gaps = 8/353 (2%) Strand=Plus/Plus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| | || | |||||||||||||| | ||||||||||||| |||||| Sbjct 127908 GCATCTTCACAGACATGTCTATTTCACCGAGTCTCTCTCCGAGACAGTGCCCAGATCGTT 127967 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 127968 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 128027 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGAT-TGCTC---TAACAG 182 ||||||||||||||||| || ||||||| || | ||| | | | || | || Sbjct 128028 TAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGTCGGCTCCCCTGTCATCAAGTCACCA 128087 Query 183 ATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTA 242 | |||| ||||||| |||| |||||||||||||| || |||||| ||||| |||||| Sbjct 128088 ACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTT 128147 Query 243 GCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCG---GCCTGTCA 299 || || ||||||||||||||||||||||||| |||||| || ||||| ||| | Sbjct 128148 GCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCTTTGT 128207 Query 300 TAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352 || |||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct 128208 GAG-GAGGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTA 128259 >seq598 Length=1678608 Score = 333 bits (368), Expect = 6e-89 Identities = 288/353 (82%), Gaps = 8/353 (2%) Strand=Plus/Plus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| | || | |||||||||||||| | ||||||||||||| |||||| Sbjct 1646983 GCATCTTCACAGACATGTCTATTTCACCGAGTCTCTCTCCGAGACAGTGCCCAGATCGTT 1647042 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1647043 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 1647102 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGAT-TGCTC---TAACAG 182 |||||||||||||| || || ||||||| || | ||| | | | || | || Sbjct 1647103 TAGTTACGGCCGCCTTTCACCGGGGCTTTGGTCGTCGGCTCCCCTGTCATCAAGTCACCA 1647162 Query 183 ATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTA 242 | |||| ||||||| |||| |||||||||||||| || |||||| ||||| |||||| Sbjct 1647163 ACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTT 1647222 Query 243 GCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCG---GCCTGTCA 299 || || ||||||||||||||||||||||||| || ||| || ||||| ||| | Sbjct 1647223 GCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGACCTGGTCACTGCGACCCCCTTTGT 1647282 Query 300 TAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352 || |||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct 1647283 GAG-GAGGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTA 1647334 >seq2498 Length=401262 Score = 273 bits (302), Expect = 5e-71 Identities = 286/376 (76%), Gaps = 20/376 (5%) Strand=Plus/Plus Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAA 60 ||| | |||||||||| | || | ||||||||||| ||| || ||||||| | | Sbjct 150245 TACTCCGCATCTTCACGGAGAATTCAATTTCACCGGGTCCATGTCGGAGACAGCGGGGCA 150304 Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120 ||||||| || ||||||| ||||| ||||| |||||||||||||||||||||||||| Sbjct 150305 GTCGTTACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTCGCTACCTTAGGA 150364 Query 121 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAAC 180 | |||| |||||| |||||||||||| ||||||| |||| ||| | |||| Sbjct 150365 CAGTTAGAGTTACTGCCGCCGTTTACCGGGGCTTCCATTCAAAGCT--------TATAAC 150416 Query 181 AGATCCCCTT--AACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGA 238 | || |||| |||||||||||||||||||| ||||| ||||||||||| || | | Sbjct 150417 ACTTCTCCTTCCGACCTTCCAGCACCGGGCAGGTGTCAGACTCTATACATCGTGTTACCA 150476 Query 239 CTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTC 298 ||||||||| ||||||||||| |||||||||||| ||| | | ||| || | | Sbjct 150477 CTTAGCAGAGTCCTGTGTTTTTAATAAACAGTCGCTACCCCCTGGTATGTGCCGCTTTCC 150536 Query 299 ------ATAGACAG----GCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTC 348 | ||| || |||||||||||||| ||||||||||||||||||||||||||| Sbjct 150537 TAATCAAAAGATAGGAGAGCACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCGAGTTC 150596 Query 349 CTTAACAATAGTTCTC 364 ||| || |||||| Sbjct 150597 CTTCGACATGGTTCTC 150612 >seq1 Length=36501346 Score = 197 bits (218), Expect = 3e-48 Identities = 204/263 (78%), Gaps = 12/263 (5%) Strand=Plus/Minus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 ||||||||| | || | ||||||||||||||| ||| |||||||| |||||| Sbjct 4030478 GCATCTTCATAGACATGTCTATTTCACCGAGTCTA------AGATAGTGCCCAGATCGTT 4030425 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 |||||||| ||||||||| |||||||||||| |||||||||| ||||||||||||||||| Sbjct 4030424 ACGCCTTTTGTGCGGGTCAGAACTTACCCGATAAGGAATTTCACTACCTTAGGACCGTTA 4030365 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCA-CTGCTTCGAT-TGCTC---TAACA 181 ||||||||| ||| ||| | ||||||| | ||| | ||| | | | || | || Sbjct 4030364 TAGTTACGGTCGCTGTTCATCGGGGCTT-CGATCATCGGCTCCCCTATCATCAAGTCACC 4030306 Query 182 GATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTT 241 | |||| ||||||| |||| ||||| || ||| | || |||||| ||||| | |||| Sbjct 4030305 AACTTCCTTGACCTTCCGGCACTGGGCAAGCATCAACCCCCATACATGGTCTTACAACTT 4030246 Query 242 AGCAGAAACCTGTGTTTTTGGTA 264 || || |||| ||||||||||| Sbjct 4030245 TGCGGAGACCTTTGTTTTTGGTA 4030223 Score = 196 bits (216), Expect = 1e-47 Identities = 129/143 (90%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| | || | |||||||||||||| | ||||||||||||| |||||| Sbjct 13827003 GCATCTTCACAGACATGTCTATTTCACCGAGTCTCTCTCCGAGACAGTGCCCAGATCGTT 13827062 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 13827063 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 13827122 Query 127 TAGTTACGGCCGCCGTTTACTGG 149 ||||||||||||||||| || || Sbjct 13827123 TAGTTACGGCCGCCGTTCACCGG 13827145 >seq8 Length=45727239 Score = 194 bits (214), Expect = 4e-47 Identities = 208/272 (76%), Gaps = 10/272 (4%) Strand=Plus/Plus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 ||||||||| | || | |||||||||||||| | | ||||| |||| | |||||| Sbjct 29194696 GCATCTTCATAGACATGTCTATTTCACCGAGTCTCTCTTCGAGACCATGCCTAGATCGTT 29194755 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 ||| |||||| | |||||| ||||||||| |||||||||||| ||||||||||| |||| Sbjct 29194756 ACGTCTTTCGAGTGGGTCGAAACTTACCCAACAAGGAATTTCATTACCTTAGGACTGTTA 29194815 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGATCC 186 ||||||||||||| ||| || ||||||| || | || || ||| || | || || Sbjct 29194816 TAGTTACGGCCGCTGTTCACCGGGGCTTCGGTCGTCGGC-TCCCTTG-TC-ATCAAGTCA 29194872 Query 187 CC-------TTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGAC 239 || || ||||||| || ||||| |||||| | || |||||| ||||| |||| Sbjct 29194873 CCAACTTCTTTGACCTTCCGATACTGGGCAAGCGTCAACCCCCATACATGGTCTTACGAC 29194932 Query 240 TTAGCAGAAACCTGTGTTTTTGGTAAACAGTC 271 || || || || |||||||||||||| ||||| Sbjct 29194933 TTTGCGGAGACTTGTGTTTTTGGTAAGCAGTC 29194964 >seq11 Length=19732206 Score = 167 bits (184), Expect = 5e-39 Identities = 128/152 (84%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 3 CCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAAT 62 ||| ||||||||| | || | |||||||||||||| | |||||| |||||| || Sbjct 10737459 CCCCGCATCTTCATAGACATGTCTATTTCACCGAGTCTCTCTGCGAGACAATGCCCAGAT 10737400 Query 63 CGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACC 122 ||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||||| Sbjct 10737399 CGTTACGCCTTTCGTGCATGTCGAAACTTACCCCACAAGGAATTTCGCTACCTTAGGACC 10737340 Query 123 GTTATAGTTACGGCCGCCGTTTACTGGGGCTT 154 ||||| ||||||| |||| || || ||||||| Sbjct 10737339 GTTATCGTTACGGTCGCCATTCACCGGGGCTT 10737308 Score = 109 bits (120), Expect = 1e-21 Identities = 83/97 (86%), Gaps = 2/97 (2%) Strand=Plus/Minus Query 192 ACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAGAAACC 251 ||||||| ||| |||||||||||||| || |||||| ||||| |||||| ||||| || Sbjct 10737706 ACCTTCCGACACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTTGCAGAGACT 10737647 Query 252 TGTGTTTTTGGTAAACAGTCGCTTGGGCCT--ATTCT 286 ||||||||||||||| ||||||| |||||| ||||| Sbjct 10737646 TGTGTTTTTGGTAAATAGTCGCTCGGGCCTGAATTCT 10737610 >seq5 Length=37180910 Score = 159 bits (176), Expect = 7e-37 Identities = 136/167 (81%), Gaps = 2/167 (1%) Strand=Plus/Plus Query 188 CTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAGA 247 ||| ||||||| |||| ||||||||||||||||| |||||| ||||| |||||| || || Sbjct 12947167 CTTGACCTTCCGGCACTGGGCAGGCGTCAGCTCCCATACATGGTCTTACGACTTTGCGGA 12947226 Query 248 AACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCG--GCCTGTCATAGACA 305 ||||||||||||||||||||||||| | || | | ||||| || | || | Sbjct 12947227 GACCTGTGTTTTTGGTAAACAGTCGCCCGAGCTTGGTTACTGCGACCCCCTTTATGAGGA 12947286 Query 306 GGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352 | ||||||||||||| ||||||||||| |||||||||||||||||| Sbjct 12947287 GACACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTA 12947333 >seq4 Length=20812224 Score = 141 bits (156), Expect = 2e-31 Identities = 99/113 (88%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 8 CATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTA 67 ||||||||| | || | |||||||||||||| | |||| |||||||| ||||||| Sbjct 9226216 CATCTTCACAGACATGTCTATTTCACCGAGTCTCTCTCCGAGATAGTGCCCAGATCGTTA 9226275 Query 68 CGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120 || |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 9226276 CGTCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 9226328 >seq1976 Length=1322 Score = 129 bits (142), Expect = 1e-27 Identities = 101/121 (83%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAA 60 ||| | |||||||||| | || | ||||||| | ||| | | | ||||||||| || Sbjct 1202 TACTCCGCATCTTCACGGAGAATTCAATTTCGCTGAGCATGTCCTGGAGACAGTGGGGAA 1261 Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120 |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1262 GTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 1321 Query 121 C 121 | Sbjct 1322 C 1322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062373450624