Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20radiata_20var._20radiata_20[refseq_20GCF_5F000741045.1_20201 5-10-28] 2,499 sequences; 463,637,892 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq8 351 2e-94 seq41 228 1e-57 seq1976 75.2 2e-11 >seq8 Length=45727239 Score = 351 bits (388), Expect = 2e-94 Identities = 255/293 (87%), Gaps = 2/293 (1%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | ||||||| ||| | | || ||||| ||||||||||||||||| |||||| Sbjct 27378486 TACTAGGTTGAATTACTATTACGAC-ACTGTCATTAGTAGGGTAAAACTAACATGTCTCC 27378428 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||| ||||| |||||||||||| ||| || Sbjct 27378427 CGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGCGAACAATCCAACACTTGGTGA 27378368 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 ||| |||||| ||||| ||||||||||||||||||| ||||||||||||||||||||| Sbjct 27378367 ATTTTGCTTCACAATGATTGGAAGAGCCGACATCGAAG-ATCAAAAAGCAACGTCGCTAT 27378309 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 |||||||| |||| |||||| || |||||||||||||||||||||| |||||||||| | Sbjct 27378308 GAACGCTTAGCTGTCACAAGACATTTATCCCTGTGGTAACTTTTCTAACACCTCTAGCTT 27378249 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 |||||| || ||||||||||| |||||||||||||||||| | ||||||||| Sbjct 27378248 CAAATTCTGAAGGACTAAAGGACCGATAGGCCACACTTTCACGATTTGTATTC 27378196 >seq41 Length=170566 Score = 228 bits (252), Expect = 1e-57 Identities = 140/149 (94%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 145 AGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAG 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 151117 AGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAG 151176 Query 205 TTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATC 264 ||||||||||||||||||||||| ||||| |||| ||||||| || ||||||||||||| Sbjct 151177 TTATCCCTGTGGTAACTTTTCTGACACCTTTAGCTTCAAATTCTGAAGGACTAAAGGATC 151236 Query 265 GATAGGCCACACTTTCATGGTTTGTATTC 293 |||||||||| |||||| |||| |||||| Sbjct 151237 GATAGGCCACGCTTTCACGGTTCGTATTC 151265 >seq1976 Length=1322 Score = 75.2 bits (82), Expect = 2e-11 Identities = 126/181 (70%), Gaps = 6/181 (3%) Strand=Plus/Plus Query 47 ACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAAT 106 || || |||||||| |||| | |||||||||||||||| || ||| || ||||| Sbjct 635 ACCAAACTGTCTCACGACGTTTTAAACCCAGCTCACGTACCTCTTTAAATGGCGAACAGC 694 Query 107 CCAACGCTT---ACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCA 163 | || ||| |||| | | || | | |||| || ||||||||||||| | || Sbjct 695 CATACCCTTGGGACCGGCTACAGCCCCAGGATGA---GATGAGCCGACATCGAGGTGCCA 751 Query 164 AAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTT 223 || | | ||||| ||||||| ||||| | | |||| |||||||| ||| |||| Sbjct 752 AACACCGCCGTCGATATGAACTCTTGGGCGGTATCAGCCTGTTATCCCCAGAGTACCTTT 811 Query 224 T 224 | Sbjct 812 T 812 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854378648544