Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20radiata_20var._20radiata_20[refseq_20GCF_5F000741045.1_20201 5-10-28] 2,499 sequences; 463,637,892 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq1780 82.4 5e-14 seq2210 75.2 7e-12 >seq1780 Length=2251 Score = 82.4 bits (90), Expect = 5e-14 Identities = 65/74 (88%), Gaps = 3/74 (4%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| | ||| || ||||||||| ||||||||||| |||||||||||||||||||| Sbjct 2000 CTCACTAAACAATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 2057 Query 109 TAATACAACGCAAG 122 |||| ||| || || Sbjct 2058 TAAT-CAATGCGAG 2070 >seq2210 Length=469383 Score = 75.2 bits (82), Expect = 7e-12 Identities = 59/67 (88%), Gaps = 3/67 (4%) Strand=Plus/Minus Query 58 CCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAAC 117 |||||| || |||||| | ||||||||||| |||||||||||||||||||||| | |||| Sbjct 9517 CCATTTAAT-CGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAAC 9461 Query 118 GCAAGCT 124 || |||| Sbjct 9460 GCGAGCT 9454 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300792952820