Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20radiata_20var._20radiata_20[refseq_20GCF_5F000741045.1_20201 5-10-28] 2,499 sequences; 463,637,892 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq448 77.0 4e-12 seq1 75.2 1e-11 >seq448 Length=441671 Score = 77.0 bits (84), Expect = 4e-12 Identities = 81/104 (78%), Gaps = 2/104 (2%) Strand=Plus/Plus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 |||||| |||||| | | |||||| | |||| |||||||||||||| | | ||||| Sbjct 341630 CCAACACAATAGGATCAAAA-TCCTATGGTGTTATCCCATGCTAATGTATCCAGAGCGTA 341688 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGG 115 || |||||||| ||||||||||| |||| |||| || |||| Sbjct 341689 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAGCACTGG 341732 >seq1 Length=36501346 Score = 75.2 bits (82), Expect = 1e-11 Identities = 77/98 (79%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 |||||| |||||| | | |||| | | |||| |||||||||||||| ||| ||||| Sbjct 8242988 CCAACACAATAGGATCAGAA-TCCTGTGATGTTATCCCATGCTAATGTATCCGGAGCGTA 8242930 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 | |||||||||||||||||||| |||| |||| || Sbjct 8242929 GACTTGCTTTGAACACTCTAATTTCTTCAAAGTAACAG 8242892 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595185590766