Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20radiata_20var._20radiata_20[refseq_20GCF_5F000741045.1_20201 5-10-28] 2,499 sequences; 463,637,892 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq448 129 6e-28 >seq448 Length=441671 Score = 129 bits (142), Expect = 6e-28 Identities = 143/187 (76%), Gaps = 3/187 (2%) Strand=Plus/Minus Query 5 CCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACAT 63 |||| || |||||||||| ||||||||| | |||||||| |||| |||| | |||||| Sbjct 341732 CCAGTGCTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGGATACAT 341673 Query 64 TACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCG 123 || ||||| |||| | |||||| | | | ||||| ||| || | | ||| || | Sbjct 341672 TAGCATGGGATAACACCATAGGATTTT-GATCCTATTGTGTTGGCCTTTGGGATCGAA-G 341615 Query 124 TAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTG 183 ||||||| || | ||| ||||||||| | ||||| || |||| |||||||||||||| Sbjct 341614 TAATGATTAACAGGGACAGTCGGGGGCATTCGTATTTNATAGTCAGAGGTGAAATTCTTG 341555 Query 184 GATTTAT 190 ||||||| Sbjct 341554 GATTTAT 341548 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511987604960