Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20radiata_20var._20radiata_20[refseq_20GCF_5F000741045.1_20201 5-10-28] 2,499 sequences; 463,637,892 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq1780 159 7e-37 seq2210 143 5e-32 seq2126 123 5e-26 >seq1780 Length=2251 Score = 159 bits (176), Expect = 7e-37 Identities = 165/214 (77%), Gaps = 3/214 (1%) Strand=Plus/Minus Query 115 CAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGA 174 |||||||||||||||||||||||||||||| |||||| |||||||||||||| ||| | Sbjct 2251 CAATAACAGGTCTGTGATGCCCTTAGATGTCCTGGGCTGCACGCGCGCTACAATGAAGGT 2192 Query 175 GCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGC 234 ||||| || || ||| ||||| ||||| |||||| | | || | | || ||| Sbjct 2191 ATCAACGTGT--ATTTCCTAGGCCGAGAGGTCCGGGTAAACCGCTGAACCACCTTCTTGC 2134 Query 235 TGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCA 294 | ||||| | | | || || | || | | | ||| ||||| || |||||| ||| |||| Sbjct 2133 TTGGGATTGTGAACTGAAACTGTT-CACATGAACCTGGAATTCCCAGTAAGTGCGAGTCA 2075 Query 295 TCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 | | | ||| |||||||||||||||||||||||| Sbjct 2074 TTAACTCGCATTGATTACGTCCCTGCCCTTTGTA 2041 >seq2210 Length=469383 Score = 143 bits (158), Expect = 5e-32 Identities = 105/121 (87%), Gaps = 1/121 (1%) Strand=Plus/Plus Query 208 GGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAA 267 |||||||||| | ||| | ||||| |||||||||| |||||||| | ||| ||||||| Sbjct 9366 GGGTAATCTT-TGAAATTTCATCGTGATGGGGATAGATCATTGCAAGTGTTGGTCTTCAA 9424 Query 268 CGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGT 327 |||||||| ||||||||||||| ||||| ||| |||||||| |||||||||||||||||| Sbjct 9425 CGAGGAATTCCTAGTAAGCGCGAGTCATAAGCTCGCGTTGACTACGTCCCTGCCCTTTGT 9484 Query 328 A 328 | Sbjct 9485 A 9485 >seq2126 Length=2451 Score = 123 bits (136), Expect = 5e-26 Identities = 188/262 (72%), Gaps = 8/262 (3%) Strand=Plus/Plus Query 71 GCTTCTTAGAGGGACTATCGGCTCA---AGCCGATGGAAGTTTGAGGCAATAACAGGTCT 127 ||||||||||||||| | |||| || ||||| || | | || ||||||||||| Sbjct 1530 GCTTCTTAGAGGGACAAACGGCGCAGTCAGCCGTGCGA--TACGGAGCGATAACAGGTCT 1587 Query 128 GTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACT-GACAGAGCCAACGAGTTC 186 ||||||||||||||||| |||||| ||||||| |||||| | ||| || || || |||| Sbjct 1588 GTGATGCCCTTAGATGTCCTGGGCGGCACGCGTGCTACAATGGACGGA-TCAGCGTGTTC 1646 Query 187 ATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGC 246 | ||| | || || ||||| | | || | | |||| |||| | | Sbjct 1647 -TACCCTACGTCGAGAGACACCGGTAACCCCCTGAATCCCGTCCGTGGAAGGGACCGGGG 1705 Query 247 ATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTT 306 |||||||| || | | |||||||||| || |||| |||| ||||| | | |||| Sbjct 1706 CTTGCAATTGTTCCCCGCGAACGAGGAATTCCCAGTAGTCGCGAGTCATAACCTCGCGGC 1765 Query 307 GATTACGTCCCTGCCCTTTGTA 328 ||||| |||||||||||||||| Sbjct 1766 GATTAAGTCCCTGCCCTTTGTA 1787 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947176329472