Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20radiata_20var._20radiata_20[refseq_20GCF_5F000741045.1_20201 5-10-28] 2,499 sequences; 463,637,892 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq2122 480 3e-133 seq2499 179 1e-42 seq2498 174 5e-41 seq8 145 3e-32 seq551 132 2e-28 seq9 95.1 4e-17 seq2040 87.8 6e-15 >seq2122 Length=2452 Score = 480 bits (532), Expect = 3e-133 Identities = 408/495 (82%), Gaps = 7/495 (1%) Strand=Plus/Minus Query 2 CGAGTCCGAACAGGGCGA-CAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCAT 60 |||||||||| |||||| ||||||||||||||||||||||||||| ||||||| |||| Sbjct 511 CGAGTCCGAATAGGGCGTTCAGTCGCTGGGTGTAGACCCGAAACCAGATGATCTATCCAT 452 Query 61 GGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAAT 120 ||||||| |||||| |||||||||| ||||||| |||||||||||||||||||||||| Sbjct 451 GGCCAGGTTGAAGGCACGGTAACACGTGCTGGAGGACCGAACCCACTAATGTTGAAAAAT 392 Query 121 TAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTC 180 ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct 391 TAGGGGATGAGCTGTGGATAGGGGTGAAAGGCTAAACAAATCTGGAAATAGCTGGTTCTC 332 Query 181 TCCGAAAACTATTTAGGTAGTGCCTCAAGTATCACCATCGGGGGTAGAGCACTGTTATGG 240 |||||||||||||||||||||||||| ||| || ||||||||||||||||||| | Sbjct 331 TCCGAAAACTATTTAGGTAGTGCCTCGCATATTACTGCAGGGGGTAGAGCACTGTTATAG 272 Query 241 CTAGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCATCAGTTTTACC 300 |||||||||||| |||||||||||||| || ||||||||||||| | | || | | Sbjct 271 CTAGGGGGTCATGGCGACTTACCAAACTATGGCAAACTCCGAATAC-CTGCAAGTACAGT 213 Query 301 GCGGGAGTGAGGGCA-TGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACTAT 359 ||||||| || ||| ||||||||| ||||| | | ||||| || || || ||| Sbjct 212 GCGGGAGACAGAGCACCGGGTGCTAACGTCCGGACTCAAGAGGGAAACAACCCAGACCGC 153 Query 360 CAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGACAGC 419 ||||||||| ||| |||| | ||||||| | |||||||| || || |||||| Sbjct 152 CAGCTAAGGTCCC-AAATTATCGCTAAGTGGGA--AACGAAGTGGGAAGGCATAGACAGT 96 Query 420 TAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTCGA 479 |||| |||||||| |||||||||| || |||||||| |||||| |||||||| |||| Sbjct 95 CAGGAGGTTGGCTTAGAAGCAGCCA-TCCTTTAAAGAAAGCGTAATAGCTCACTGATCGA 37 Query 480 GGAGTCGGGCGTGGA 494 | ||| ||| ||| Sbjct 36 GTCGTCCTGCGCGGA 22 >seq2499 Length=151271 Score = 179 bits (198), Expect = 1e-42 Identities = 395/583 (68%), Gaps = 38/583 (7%) Strand=Plus/Plus Query 2 CGAGTCCGAACAGGGCGACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATG 61 |||||| | ||||| | ||| ||| | | |||||||| | |||||||| ||||| Sbjct 102858 CGAGTCTTCATAGGGCAATTGTCACTGCTTATGGACCCGAACCTGGGTGATCTATCCATG 102917 Query 62 GCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATT 121 ||||||||||| | ||| | || |||||||||||||| ||| |||||||| ||| Sbjct 102918 ACCAGGATGAAGCTTGGGTGAAACTAAGTGGAGGTCCGAACCGACTGATGTTGAAGAATC 102977 Query 122 AGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCT 181 || ||||||| ||||| ||||||||||| || | | ||| || |||||||||||| Sbjct 102978 AGCGGATGAGTTGTGGTTAGGGGTGAAATGCCACTCGAACCCAGAGCTAGCTGGTTCTCC 103037 Query 182 CCGAAAACTATTTAGGTAGTGCCTCAAGTATCAC----CATC-GGGGGTAGAGCACTGTT 236 |||||| || ||| || ||| | || |||| |||||| ||||||||| Sbjct 103038 CCGAAATGCGTTGAGGCGCAGC----AGT-TGACTAGACATCTAGGGGTAAAGCACTGTT 103092 Query 237 ATGGCTAGGG-GGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGC--------G 287 || ||| | | ||| ||||||| | |||||||| |||| | Sbjct 103093 TCGGTGCGGGCCGCGAGAGCG--GTACCAAATCGAGGCAAACTCTGAATACTAGATATGA 103150 Query 288 CATCAGTTTTACCGCGG-----------GAGTGAGGGCATGGGTGCTAAGGTCCGTGCCC 336 | ||| | || || |||||| ||||| | |||| | | | | Sbjct 103151 CCTCAAAATAACAAGGGTCAAGGTCGGCCAGTGAGACGATGGGGGATAAGCTTCATCGTC 103210 Query 337 GAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAA 396 |||||| || | ||||| | ||||||||||||| ||||||| ||| ||| | | || Sbjct 103211 GAGAGGGAAACAGCCCGGATCACCAGCTAAGGCCCCTAAATGACCGCTCAGTGATA--AA 103268 Query 397 CGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGA 456 || || | ||| ||||| | |||| ||| || | |||||||||| | || ||||| Sbjct 103269 GGAGGTAGGGGTGCAGAGACAACCAGGAGGTTTGCCTAGAAGCAGCCA-CCCTTGAAAGA 103327 Query 457 GTGCGTAACAGCTCACTAGTCGAGGAGTCGGGCGTGGATAATAATCGGGTATTAAGTTGT 516 |||||||| |||||||| ||||| || ||| || || | |||| |||| | Sbjct 103328 GTGCGTAATAGCTCACTGATCGAGCGCTCTTGCGCCGAAGATGAACGGG-GCTAAGCGAT 103386 Query 517 CTACCGAAGCAGTGGGATCATTTATATG-ATCGGTAGGGGAGC 558 || ||||||| ||||||| | | ||| |||||||||||||| Sbjct 103387 CTGCCGAAGCTGTGGGAT-GTCAAAATGAATCGGTAGGGGAGC 103428 Score = 179 bits (198), Expect = 1e-42 Identities = 395/583 (68%), Gaps = 38/583 (7%) Strand=Plus/Minus Query 2 CGAGTCCGAACAGGGCGACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATG 61 |||||| | ||||| | ||| ||| | | |||||||| | |||||||| ||||| Sbjct 129312 CGAGTCTTCATAGGGCAATTGTCACTGCTTATGGACCCGAACCTGGGTGATCTATCCATG 129253 Query 62 GCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATT 121 ||||||||||| | ||| | || |||||||||||||| ||| |||||||| ||| Sbjct 129252 ACCAGGATGAAGCTTGGGTGAAACTAAGTGGAGGTCCGAACCGACTGATGTTGAAGAATC 129193 Query 122 AGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCT 181 || ||||||| ||||| ||||||||||| || | | ||| || |||||||||||| Sbjct 129192 AGCGGATGAGTTGTGGTTAGGGGTGAAATGCCACTCGAACCCAGAGCTAGCTGGTTCTCC 129133 Query 182 CCGAAAACTATTTAGGTAGTGCCTCAAGTATCAC----CATC-GGGGGTAGAGCACTGTT 236 |||||| || ||| || ||| | || |||| |||||| ||||||||| Sbjct 129132 CCGAAATGCGTTGAGGCGCAGC----AGT-TGACTAGACATCTAGGGGTAAAGCACTGTT 129078 Query 237 ATGGCTAGGG-GGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGC--------G 287 || ||| | | ||| ||||||| | |||||||| |||| | Sbjct 129077 TCGGTGCGGGCCGCGAGAGCG--GTACCAAATCGAGGCAAACTCTGAATACTAGATATGA 129020 Query 288 CATCAGTTTTACCGCGG-----------GAGTGAGGGCATGGGTGCTAAGGTCCGTGCCC 336 | ||| | || || |||||| ||||| | |||| | | | | Sbjct 129019 CCTCAAAATAACAAGGGTCAAGGTCGGCCAGTGAGACGATGGGGGATAAGCTTCATCGTC 128960 Query 337 GAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAA 396 |||||| || | ||||| | ||||||||||||| ||||||| ||| ||| | | || Sbjct 128959 GAGAGGGAAACAGCCCGGATCACCAGCTAAGGCCCCTAAATGACCGCTCAGTGATA--AA 128902 Query 397 CGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGA 456 || || | ||| ||||| | |||| ||| || | |||||||||| | || ||||| Sbjct 128901 GGAGGTAGGGGTGCAGAGACAACCAGGAGGTTTGCCTAGAAGCAGCCA-CCCTTGAAAGA 128843 Query 457 GTGCGTAACAGCTCACTAGTCGAGGAGTCGGGCGTGGATAATAATCGGGTATTAAGTTGT 516 |||||||| |||||||| ||||| || ||| || || | |||| |||| | Sbjct 128842 GTGCGTAATAGCTCACTGATCGAGCGCTCTTGCGCCGAAGATGAACGGG-GCTAAGCGAT 128784 Query 517 CTACCGAAGCAGTGGGATCATTTATATG-ATCGGTAGGGGAGC 558 || ||||||| ||||||| | | ||| |||||||||||||| Sbjct 128783 CTGCCGAAGCTGTGGGAT-GTCAAAATGAATCGGTAGGGGAGC 128742 >seq2498 Length=401262 Score = 174 bits (192), Expect = 5e-41 Identities = 321/461 (70%), Gaps = 26/461 (6%) Strand=Plus/Minus Query 35 GACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAG-GTGCGGTAACACGCCCTGGA 93 ||||||||||| | |||||| ||||| |||| ||||| | || | ||| ||| |||| Sbjct 151758 GACCCGAAACCGATCGATCTAGCCATGAGCAGGTTGAAGAGAGCTCTCACAGGCCTTGGA 151699 Query 94 GGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCT 153 || |||||||||| |||| | ||||| |||||||| ||||| |||||||||||||| Sbjct 151698 GGACCGAACCCACGTATGTGGCAAAATACGGGGATGACTTGTGGCTAGGGGTGAAAGGCC 151639 Query 154 AAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGCCTCAAGTATC 213 || ||| | ||| |||||||||| || ||||| ||||||| |||| || | | || Sbjct 151638 AACCAAGATCGGAGATAGCTGGTTTTCCGCGAAATCTATTTAAGTAGAGCGT--ATGATG 151581 Query 214 ACCAT---CGGGGGTAGAGCACTGTTATGGCTAGGGGG---TCATTGCGACTTACCAAAC 267 | || | | ||||||||||| |||||||| | |||| || |||||||| | Sbjct 151580 TCGATGGCCCGAGGTAGAGCACTCAATGGGCTAGGGTGGCCCCATTTCGCCTTACCAACC 151521 Query 268 CATTGCAAACTCCGAATGC--GC----ATCAGTTTTACCGCGGGAGTGAGGGCATGGGTG 321 | | ||||||||||| | || ||| || ||| || || ||||| Sbjct 151520 CCAGGGAAACTCCGAATACAGGCCTAGATCGTTTGTAC----AGACAGACTTTTAGGGTG 151465 Query 322 CTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACA 381 ||||| ||| ||||||| || | || || | ||||||| ||| || | Sbjct 151464 CTAAGATCCAAAGTCGAGAGGGAAACAGCCCAGATCGTACGCTAAGGTCCCTAAGCAATC 151405 Query 382 GCTAAGTTAAACTAACGAAGTCTGAT--TGCTAAGACAGCTAGGATGTTGGCTTGGAAGC 439 || ||| || || |||| |||| || | |||| | |||| || ||||||||||| Sbjct 151404 ACTTAGTGGAA--AAGGAAG--TGATCGAGCGATGACAACCAGGAGGTGGGCTTGGAAGC 151349 Query 440 AGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTCGAG 480 ||||| || ||| || | |||||| |||||||| ||| || Sbjct 151348 AGCCA-TCCTTTGAATAAAGCGTAATAGCTCACTGGTCTAG 151309 >seq8 Length=45727239 Score = 145 bits (160), Expect = 3e-32 Identities = 369/553 (67%), Gaps = 33/553 (6%) Strand=Plus/Plus Query 2 CGAGTCCGAACAGGGCGACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATG 61 |||||| | ||||| | ||| ||| | | |||||||| | |||||||| ||||| Sbjct 1248639 CGAGTCTTCATAGGGCAATTGTCACTGCTTATGGACCCGAACCTGGGTGATCTATCCATG 1248698 Query 62 GCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATT 121 |||||||||| | ||| | || |||||||||||||| ||| |||||||| |||| Sbjct 1248699 ANCAGGATGAAGCTTGGGTGAAACTAAGTGGAGGTCCGAACCGACTGATGTTGAAGAATT 1248758 Query 122 AGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCT 181 || ||||||| |||| || |||||||| || | | ||| || || ||||||||| Sbjct 1248759 AGCGGATGAGTTGTGATTAAGGGTGAAATGCCACTCGAACCCAGAGCTAACTGGTTCTCC 1248818 Query 182 CCGAAAACTATTTAGGTAGTGCCTCAA--GTATCACCATC-GGGGGTAGAGCACTGTTAT 238 | |||| || || | || ||| | | |||| |||||| ||||||||| Sbjct 1248819 CTGAAATGCGTTGAG---GCGCAGCAATTGACTAGACATCTAGGGGTAAAGCACTGTTTC 1248875 Query 239 GGCTAGGG-GGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGC---GCATCAGT 294 || ||| | | ||| ||||||| |||||||| |||| | ||| | Sbjct 1248876 GGTGCGGGCCGCGAGAGCG--GTACCAAATGGAGGCAAACTCTGAATACTAGACATGACC 1248933 Query 295 T----TTACCGCGGG------------AGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGA 338 | || | ||| |||||| ||||| | |||| | | | ||| Sbjct 1248934 TCAAAATAACAAGGGGCAAGGTCGACTAGTGAGACGATGGGGGATAAGCTTCATCGTCGA 1248993 Query 339 GAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACG 398 |||| ||| || | ||| | || |||||||||| ||||||| ||| ||| || || | Sbjct 1248994 GAGG-GAACAACCTGGATCACCAACTAAGGCCCCTAAATGACCGCTCAGT--GACAAAGG 1249050 Query 399 AAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGT 458 | || | ||| ||||| |||||| ||| || | |||||| ||| | || ||||||| Sbjct 1249051 AGGTAGGGGTGCAGAGACAACTAGGAGGTTTGCCTAGAAGCAACCA-CCCTTGAAAGAGT 1249109 Query 459 GCGTAACAGCTCACTAGTCGAGGAGTCGGGCGTGGATAATAATCGGGTATTAAGTTGTCT 518 |||||| |||||||| ||||| || || || || | |||| | |||| ||| Sbjct 1249110 GCGTAATAGCTCACTGATCGAGCGCTCTTGCACCGAAGATGAACGGG-ACTAAGCGATCT 1249168 Query 519 ACCGAAGCAGTGG 531 ||||||| |||| Sbjct 1249169 GCCGAAGCTGTGG 1249181 >seq551 Length=1408 Score = 132 bits (146), Expect = 2e-28 Identities = 141/186 (76%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 2 CGAGTCCGAACAGGGCGACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATG 61 |||||| | ||||| | ||| ||| | | |||||||| | |||||||| ||||| Sbjct 1259 CGAGTCTTTATAGGGCAATTGTCACTGCTTATGGACCCGAACCTGGGTGATCTATCCATG 1200 Query 62 GCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATT 121 ||||||||||| | ||| | || |||||||||||||| ||| |||||||| ||| Sbjct 1199 ACCAGGATGAAGCTTGGGTGAAACTAAGTGGAGGTCCGAACCGACTGATGTTGAAGAATC 1140 Query 122 AGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCT 181 || ||||||| ||||| ||||||||||| || | | ||| || |||||||||||| Sbjct 1139 AGCGGATGAGTTGTGGTTAGGGGTGAAATGCCACTCGAACCCAGAGCTAGCTGGTTCTCC 1080 Query 182 CCGAAA 187 |||||| Sbjct 1079 CCGAAA 1074 >seq9 Length=21008463 Score = 95.1 bits (104), Expect = 4e-17 Identities = 175/252 (69%), Gaps = 5/252 (2%) Strand=Plus/Minus Query 306 AGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTA 365 |||||| ||||| | |||| | | | ||||||| || || | ||| | || || Sbjct 4020926 AGTGAGACGATGGGGGATAAGCTTCATCGTCGAGAGGGAAACAACCTGGATCACCAATTA 4020867 Query 366 AGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGACAGCTAGGAT 425 ||||||| ||||||| ||||||| | | || || || | ||| ||||| | |||| Sbjct 4020866 AGGCCCCTAAATGACCGCTAAGTGATA--AAGGAGGTAGGGGTGCAGAGACAACCAGGAG 4020809 Query 426 GTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTCGAGGAGTC 485 ||| || | |||| | ||| | || ||||||||||||| |||||||| ||||| || Sbjct 4020808 GTTTGCCTAGAAGTATCCACCC-TTGAAAGAGTGCGTAATAGCTCACTGATCGAGTGCTC 4020750 Query 486 GGGCGTGGATAATAATCGGGTATTAAGTTGTCTACCGAAGCAGTGGGATCATTTATATGA 545 ||| || || | | | | ||| ||| |||||| ||||||| | | |||| Sbjct 4020749 TTGCGCCGAAGATGAATGTGGA-TAAACGATCTGTCGAAGCTGTGGGAT-GTCAAAATGA 4020692 Query 546 TCGGTAGGGGAG 557 |||||||||||| Sbjct 4020691 TCGGTAGGGGAG 4020680 >seq2040 Length=473612 Score = 87.8 bits (96), Expect = 6e-15 Identities = 119/164 (73%), Gaps = 3/164 (2%) Strand=Plus/Plus Query 306 AGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTA 365 |||||| ||||| | |||| | | | ||||||| || | ||||| | |||||| Sbjct 29964 AGTGAGACGATGGGGGATAAGCTTCATCGTCGAGAGGGAAACAGCCCGGATCACCAGCTA 30023 Query 366 AGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGACAGCTAGGAT 425 ||||||| ||||||| ||| ||| | | || || || | ||| ||||| | |||| Sbjct 30024 AGGCCCCTAAATGACCGCTCAGTGATA--AAGGAGGTAGGGGTGCAGAGACAACCAGGAG 30081 Query 426 GTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCT 469 ||| || | |||||||||| | || ||||||||||||| |||| Sbjct 30082 GTTTGCCTAGAAGCAGCCA-CCCTTGAAAGAGTGCGTAATAGCT 30124 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689557776896