Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20radiata_20var._20radiata_20[refseq_20GCF_5F000741045.1_20201 5-10-28] 2,499 sequences; 463,637,892 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq1976 262 1e-67 seq2498 190 7e-46 seq2499 181 4e-43 seq598 127 7e-27 seq1 123 8e-26 seq11 111 5e-22 seq8 98.7 3e-18 seq4 95.1 4e-17 >seq1976 Length=1322 Score = 262 bits (290), Expect = 1e-67 Identities = 329/447 (74%), Gaps = 6/447 (1%) Strand=Plus/Plus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACT--CACCACCTGATTG 58 ||||| ||| |||||| ||||||||| | ||| ||| || |||| || ||| |||| Sbjct 878 TCGACGTGTCAGTCTCACAGTCAAGCACGCTTATGCCATTGCACTATCAGCAC--GATTT 935 Query 59 CCAACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCC 118 || ||| | || | ||||| | | |||||||||| ||| ||||| | ||||||| Sbjct 936 CCGACCGTACCTAGCGTACCTTCGAACTCCTCCGTTACGCTTTAGGAGGAGA-CCGCCCC 994 Query 119 AGTTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCC 178 ||| ||||| ||||||| ||||||||||| | || ||| | || ||||||||||| | Sbjct 995 AGTCAAACTGCCCACCATGCACTGTCCCCGATCCGGATAACGGACCAAGGTTAGAACCGC 1054 Query 179 ACTACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATA 238 | ||| |||||||||||| | | |||||| || ||| ||| ||| | Sbjct 1055 AAACAAACCAGGGTGGTATTTCAAGGATGGCTCCACGTGATCTGGCGACCACGCTTCAAA 1114 Query 239 GTCTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTC 298 | ||||||||||||||||||| | || || | | |||||||||| ||||| Sbjct 1115 GCCTCCCACCTATCCTACACATTTGATCAAGGTTGTCACTGCGAAGCTATAGTTAAGGTG 1174 Query 299 C-CGGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCAC 357 | ||||||||| |||| |||| | | ||||||| || | | ||||||| | Sbjct 1175 CACGGGGTCTTACCGTCTAGCCGTTGGTACTCCGCATCTTCACGGAGAATTCAATTTCGC 1234 Query 358 CGGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTAC 417 | || ||| | ||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct 1235 TGAGCATGTCCTGGAGACAGTGGGGAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTAC 1294 Query 418 CCGACAAGGAATTTCGCTACCTTAGGA 444 ||||||||||||||||||||||||||| Sbjct 1295 CCGACAAGGAATTTCGCTACCTTAGGA 1321 >seq2498 Length=401262 Score = 190 bits (210), Expect = 7e-46 Identities = 292/414 (71%), Gaps = 22/414 (5%) Strand=Plus/Plus Query 76 ACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAGTTAAACTACCCACCA 135 ||||| | | |||||||||| ||| ||||| || ||||||||| ||||||||||||| Sbjct 150006 ACCTTCGCACACCTCCGTTACTCTTTAGGAGG-CATCCGCCCCAGATAAACTACCCACCT 150064 Query 136 GGCACTGTCCC---CAACCCAGATCATGGG--CCAAGGTTAGATATCCACTACGGTCAGA 190 ||| |||||| | ||| ||| | || | |||||| |||| | ||| Sbjct 150065 CGCAGTGTCCCGCCCCCCCCGAATCTTCGGTGCGGCGGTTAGGCATCCTTAGACGAAAGA 150124 Query 191 GTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAGTCTCCCACCTA 250 ||||| ||||| | | ||| | | |||| | |||||||||| Sbjct 150125 GTGGTCTTTCAGGATTGGT--------------CGTT-CTGTGTCATCGCCTCCCACCTA 150169 Query 251 TCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCC-CGGGGTCTTT 309 ||||||||| | || || | | |||||||||| ||||| | ||||||||| Sbjct 150170 TCCTACACATTTGATCAAGGTTGTCACTGCGAAGCTATAGTTAAGGTGCACGGGGTCTTA 150229 Query 310 TCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCGGGCCTGTGGT 369 |||| |||| | | ||||||| || | | ||||||||||||| | || Sbjct 150230 CCGTCTAGCCGTTGGTACTCCGCATCTTCACGGAGAATTCAATTTCACCGGGTCCATGTC 150289 Query 370 TGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAAT 429 |||||||| ||| ||||||||| |||||||||||||||| ||||| ||||||||||| Sbjct 150290 GGAGACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAAT 150349 Query 430 TTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTCAATT 483 ||||||||||||||| |||| |||||| ||||||||||| |||||||| ||| Sbjct 150350 TTCGCTACCTTAGGACAGTTAGAGTTACTGCCGCCGTTTACCGGGGCTTCCATT 150403 >seq2499 Length=151271 Score = 181 bits (200), Expect = 4e-43 Identities = 340/489 (70%), Gaps = 17/489 (3%) Strand=Plus/Minus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||| || |||| |||||||||||||||| ||| || ||||| | || || Sbjct 104595 TCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACTCGAGGGCCAATCTCC 104536 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 | | | |||| |||||||| |||||||||||| ||| |||||| | || |||||| Sbjct 104535 GTCTGGCCCGAGGAAACCTTTGCACGCCTCCGTTACCTTTGGGGAGGCCTAC-GCCCCAT 104477 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCC---AGATCATGGGCCAAGGTTAGATATC 177 ||||| | ||| | ||||||||| || || || ||| |||||||||| || Sbjct 104476 AGAAACTGTCTACCTGAGACTGTCCCCCGGCCCGTAGGTCCTGGCACAAGGTTAGAATTC 104417 Query 178 CACTACGGTCAGAGTGGTATTTCAACAACGACTC---CACAACCACTAGCGTGGCCGCAT 234 | | ||||||||||| ||| | | ||| | | ||| || |||| | Sbjct 104416 TAGCTCTTCCAGAGTGGTATCTCACTGATGGCTCTGGCCCCCCCAGAAGAA-GGCCT--T 104360 Query 235 CATAGTCTCCCACCTATCCTACACA--AACCGCACCGAATGCCAATACCAAGCTATAGTG 292 | | | | ||||||| || | || || || | || |||||| ||| | | |||| Sbjct 104359 CTTTGCCCTCCACCTAAGCTGCGCAGGAAAAGCCC--AAAGCCAATCCCAGGAAACAGTG 104302 Query 293 AAGGTCCCG-GGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAA 351 ||| | | |||||||| |||| | || | | ||||||| || | | | Sbjct 104301 AAGCTTCATAGGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTA 104242 Query 352 TTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTCGG 410 |||||||| | || | ||||||| | || |||||||||| ||||||| |||||| Sbjct 104241 TTTCACCGAGTCTCTCTCCGAGACAGT-GCCCAGATCGTTACGCCTTTCGTGCGGGTCGG 104183 Query 411 AACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTAC 470 |||||||||||||||||||||||||||||||||| ||||||||||| |||||||| || Sbjct 104182 AACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTCAC 104123 Query 471 TGGGGCTTC 479 |||||||| Sbjct 104122 CGGGGCTTC 104114 Score = 181 bits (200), Expect = 4e-43 Identities = 340/489 (70%), Gaps = 17/489 (3%) Strand=Plus/Plus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||| || |||| |||||||||||||||| ||| || ||||| | || || Sbjct 127575 TCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACTCGAGGGCCAATCTCC 127634 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 | | | |||| |||||||| |||||||||||| ||| |||||| | || |||||| Sbjct 127635 GTCTGGCCCGAGGAAACCTTTGCACGCCTCCGTTACCTTTGGGGAGGCCTAC-GCCCCAT 127693 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCC---AGATCATGGGCCAAGGTTAGATATC 177 ||||| | ||| | ||||||||| || || || ||| |||||||||| || Sbjct 127694 AGAAACTGTCTACCTGAGACTGTCCCCCGGCCCGTAGGTCCTGGCACAAGGTTAGAATTC 127753 Query 178 CACTACGGTCAGAGTGGTATTTCAACAACGACTC---CACAACCACTAGCGTGGCCGCAT 234 | | ||||||||||| ||| | | ||| | | ||| || |||| | Sbjct 127754 TAGCTCTTCCAGAGTGGTATCTCACTGATGGCTCTGGCCCCCCCAGAAGAA-GGCCT--T 127810 Query 235 CATAGTCTCCCACCTATCCTACACA--AACCGCACCGAATGCCAATACCAAGCTATAGTG 292 | | | | ||||||| || | || || || | || |||||| ||| | | |||| Sbjct 127811 CTTTGCCCTCCACCTAAGCTGCGCAGGAAAAGCCC--AAAGCCAATCCCAGGAAACAGTG 127868 Query 293 AAGGTCCCG-GGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAA 351 ||| | | |||||||| |||| | || | | ||||||| || | | | Sbjct 127869 AAGCTTCATAGGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTA 127928 Query 352 TTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTCGG 410 |||||||| | || | ||||||| | || |||||||||| ||||||| |||||| Sbjct 127929 TTTCACCGAGTCTCTCTCCGAGACAGT-GCCCAGATCGTTACGCCTTTCGTGCGGGTCGG 127987 Query 411 AACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTAC 470 |||||||||||||||||||||||||||||||||| ||||||||||| |||||||| || Sbjct 127988 AACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTCAC 128047 Query 471 TGGGGCTTC 479 |||||||| Sbjct 128048 CGGGGCTTC 128056 >seq598 Length=1678608 Score = 127 bits (140), Expect = 7e-27 Identities = 84/93 (90%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 445 |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1647038 TCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 1647097 Query 446 GGTTATAGTTACCACCGCCGTTTACTGGGGCTT 478 ||||||||||| ||||| || || ||||||| Sbjct 1647098 CGTTATAGTTACGGCCGCCTTTCACCGGGGCTT 1647130 >seq1 Length=36501346 Score = 123 bits (136), Expect = 8e-26 Identities = 80/88 (91%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 445 |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 13827058 TCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 13827117 Query 446 GGTTATAGTTACCACCGCCGTTTACTGG 473 ||||||||||| |||||||| || || Sbjct 13827118 CGTTATAGTTACGGCCGCCGTTCACCGG 13827145 Score = 104 bits (114), Expect = 8e-20 Identities = 81/97 (84%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 445 |||||||||| || |||| |||| |||||||||||| |||||||||| ||||||||||| Sbjct 4030429 TCGTTACGCCTTTTGTGCGGGTCAGAACTTACCCGATAAGGAATTTCACTACCTTAGGAC 4030370 Query 446 GGTTATAGTTACCACCGCCGTTTACTGGGGCTTCAAT 482 ||||||||||| ||| ||| | |||||||| || Sbjct 4030369 CGTTATAGTTACGGTCGCTGTTCATCGGGGCTTCGAT 4030333 >seq11 Length=19732206 Score = 111 bits (122), Expect = 5e-22 Identities = 81/94 (86%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 445 |||||||||| |||||||| |||| ||||||||| |||||||||||||||||||||||| Sbjct 10737400 TCGTTACGCCTTTCGTGCATGTCGAAACTTACCCCACAAGGAATTTCGCTACCTTAGGAC 10737341 Query 446 GGTTATAGTTACCACCGCCGTTTACTGGGGCTTC 479 ||||| ||||| |||| || || |||||||| Sbjct 10737340 CGTTATCGTTACGGTCGCCATTCACCGGGGCTTC 10737307 >seq8 Length=45727239 Score = 98.7 bits (108), Expect = 3e-18 Identities = 78/94 (83%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 445 |||||||| | |||| | ||||| ||||||||| |||||||||||| |||||||||| Sbjct 29194751 TCGTTACGTCTTTCGAGTGGGTCGAAACTTACCCAACAAGGAATTTCATTACCTTAGGAC 29194810 Query 446 GGTTATAGTTACCACCGCCGTTTACTGGGGCTTC 479 ||||||||||| |||| ||| || |||||||| Sbjct 29194811 TGTTATAGTTACGGCCGCTGTTCACCGGGGCTTC 29194844 >seq4 Length=20812224 Score = 95.1 bits (104), Expect = 4e-17 Identities = 57/60 (95%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 445 |||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 9226270 TCGTTACGTCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 9226329 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702357457024