Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20radiata_20var._20radiata_20[refseq_20GCF_5F000741045.1_20201 5-10-28] 2,499 sequences; 463,637,892 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq2499 125 2e-26 seq2498 116 8e-24 seq1 107 4e-21 seq7 104 5e-20 seq9 80.6 6e-13 seq3 77.0 7e-12 >seq2499 Length=151271 Score = 125 bits (138), Expect = 2e-26 Identities = 148/199 (74%), Gaps = 1/199 (1%) Strand=Plus/Minus Query 81 AAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTC 140 |||||||||| | | |||||| ||||| ||||||||| | | ||| |||| || Sbjct 98694 AAAAGAAGTTCATGACCCGTAGG-CCTTCTACCTTCACGCGGCATTGCTCCGTCAGGCTT 98636 Query 141 TCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAG 200 ||| |||||| || ||||| |||||||||||||||||||||| ||| ||||||||||| Sbjct 98635 TCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAG 98576 Query 201 TTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTT 260 | ||| ||||| || | ||||||| || | ||| ||| | | || ||| || || Sbjct 98575 TCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATT 98516 Query 261 ACCCCGCCTACTACCTAAT 279 || | || |||| ||||| Sbjct 98515 GCCTCACCAACTAGCTAAT 98497 Score = 125 bits (138), Expect = 2e-26 Identities = 148/199 (74%), Gaps = 1/199 (1%) Strand=Plus/Plus Query 81 AAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTC 140 |||||||||| | | |||||| ||||| ||||||||| | | ||| |||| || Sbjct 133476 AAAAGAAGTTCATGACCCGTAGG-CCTTCTACCTTCACGCGGCATTGCTCCGTCAGGCTT 133534 Query 141 TCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAG 200 ||| |||||| || ||||| |||||||||||||||||||||| ||| ||||||||||| Sbjct 133535 TCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAG 133594 Query 201 TTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTT 260 | ||| ||||| || | ||||||| || | ||| ||| | | || ||| || || Sbjct 133595 TCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATT 133654 Query 261 ACCCCGCCTACTACCTAAT 279 || | || |||| ||||| Sbjct 133655 GCCTCACCAACTAGCTAAT 133673 >seq2498 Length=401262 Score = 116 bits (128), Expect = 8e-24 Identities = 145/199 (73%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 105 CCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCA 164 ||||| || |||||| | | ||||| || | || ||| |||||| |||| ||||| || Sbjct 124977 CCTTCTTCACTCACGCGATATTGCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCA 125036 Query 165 CTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCT 224 |||||||| ||||| ||||| || |||||||||||| ||| ||||| || | ||| Sbjct 125037 CTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCGAA 125096 Query 225 CAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAAC 284 ||| | ||| |||| | |||| ||| ||| ||||| || |||||||||| || Sbjct 125097 AAGACCAGCTAAGCATCATTGGCTTGGTCAGCCTTTACCTGACCAACTACCTAATACTAC 125156 Query 285 GCATCCCCATCGTACACCG 303 ||| | |||| ||| || Sbjct 125157 GCAGGCTCATCAAACAGCG 125175 >seq1 Length=36501346 Score = 107 bits (118), Expect = 4e-21 Identities = 102/129 (79%), Gaps = 1/129 (1%) Strand=Plus/Plus Query 81 AAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTC 140 |||||||||| | | |||||| ||||| ||||||||| || | ||| ||| || Sbjct 34744869 AAAAGAAGTTCATGACCCGTAGG-CCTTCTACCTTCACGCGACATTGCTCTGTCAAGCTT 34744927 Query 141 TCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAG 200 ||| |||||| || ||||| |||||||||||||||||||||| ||| ||||||||||| Sbjct 34744928 TCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAG 34744987 Query 201 TTCCAATGT 209 | ||| ||| Sbjct 34744988 TCCCAGTGT 34744996 >seq7 Length=55601358 Score = 104 bits (114), Expect = 5e-20 Identities = 143/199 (72%), Gaps = 1/199 (1%) Strand=Plus/Plus Query 81 AAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTC 140 |||||||||| | | | |||| ||||| ||||||||| || | ||| |||| || Sbjct 32590152 AAAAGAAGTTCATGACCAGTAGG-CCTTCTACCTTCACGCGACATTGCTCCGTCAGGCTT 32590210 Query 141 TCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAG 200 ||| | |||| || ||||| |||| ||||||| || ||||| ||| ||||||||||| Sbjct 32590211 TCGCCTATTGCGGAAAATTCCCCACTATTGCCTCCTGTGGGAGTCTGGGCCGTGTCTCAG 32590270 Query 201 TTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTT 260 | ||| ||||| || | ||||||| || | ||| ||| | | || ||| || || Sbjct 32590271 TCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATT 32590330 Query 261 ACCCCGCCTACTACCTAAT 279 || | || |||| ||||| Sbjct 32590331 GCCTCACCAACTAGCTAAT 32590349 >seq9 Length=21008463 Score = 80.6 bits (88), Expect = 6e-13 Identities = 138/199 (69%), Gaps = 1/199 (1%) Strand=Plus/Plus Query 81 AAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTC 140 |||||||||| | | |||||| ||||| | ||||| | | ||| |||| | Sbjct 8339318 AAAAGAAGTTCATGACCCGTAGG-CCTTCTACTTTCACAAGGCATTGCTCCGTCAGGGTT 8339376 Query 141 TCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAG 200 || ||||||| || ||||| |||||||||||||||||| ||| ||| |||||||||| Sbjct 8339377 TCATCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGAAGTCTGGGTCGTGTCTCAG 8339436 Query 201 TTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTT 260 | | | |||| || | | ||||| || | ||| ||| | || ||| || || Sbjct 8339437 TCCTAGTGTGACTGATCATTCTCTCGGACCAGCTACTGATCATCACCTTGGTAAGCTATT 8339496 Query 261 ACCCCGCCTACTACCTAAT 279 || | || |||| ||||| Sbjct 8339497 CCCTCACCAACTAGCTAAT 8339515 >seq3 Length=12950713 Score = 77.0 bits (84), Expect = 7e-12 Identities = 84/111 (76%), Gaps = 1/111 (1%) Strand=Plus/Minus Query 81 AAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTC 140 |||||||||| | | ||| | ||||||| ||||||| | | | || |||| || Sbjct 3642600 AAAAGAAGTTCATGACCCGGA-AACCTTCTACCTTCACACGGCATTACTCCGTCAGGCTT 3642542 Query 141 TCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACC 191 ||| |||||| || ||| | |||||||||||||||||||||||||| || Sbjct 3642541 TCGCCCATTGCGGAAAATTNCCCACTGCTGCCTCCCGTAGGAGTTTGGGCC 3642491 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068773290688