Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq50471 275 9e-72
seq40580 275 9e-72
seq18959 206 4e-51
seq28020 163 4e-38
seq31343 96.9 5e-18
seq2999 73.4 6e-11
>seq50471
Length=14951
Score = 275 bits (304), Expect = 9e-72
Identities = 180/196 (92%), Gaps = 3/196 (2%)
Strand=Plus/Minus
Query 50 CTAGGAATTTCCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAAT 109
||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2156 CTAGGAATT-CCTCGTTGAAAACCAACAATTGCAATGATCTATCCCCATCACGATGAAAT 2098
Query 110 TTCAAAGATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAG 169
||||||||||||| | | ||||||||| || ||| |||||||||||||||||||||||
Sbjct 2097 TTCAAAGATTACCTGAGCTTGTCGGCCATGGCTATAAACTCGTTGAATACATCAGTGTAG 2038
Query 170 CGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCG 229
||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 2037 CGCGCGTGCGGCCCATAACATCTAAGGACATCACAGACCTGTTATTGCCTCAAACTTCCG 1978
Query 230 TGGCCTAAAAGGCCAT 245
||| ||| ||||||
Sbjct 1977 TGG--TAAGTGGCCAT 1964
>seq40580
Length=5286
Score = 275 bits (304), Expect = 9e-72
Identities = 180/196 (92%), Gaps = 3/196 (2%)
Strand=Plus/Plus
Query 50 CTAGGAATTTCCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAAT 109
||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 5065 CTAGGAATT-CCTCGTTGAAAACCAACAATTGCAATGATCTATCCCCATCACGATGAAAT 5123
Query 110 TTCAAAGATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAG 169
||||||||||||| | | ||||||||| || ||| |||||||||||||||||||||||
Sbjct 5124 TTCAAAGATTACCTGAGCTTGTCGGCCATGGCTATAAACTCGTTGAATACATCAGTGTAG 5183
Query 170 CGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCG 229
||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 5184 CGCGCGTGCGGCCCATAACATCTAAGGACATCACAGACCTGTTATTGCCTCAAACTTCCG 5243
Query 230 TGGCCTAAAAGGCCAT 245
||| ||| ||||||
Sbjct 5244 TGG--TAAGTGGCCAT 5257
>seq18959
Length=580
Score = 206 bits (228), Expect = 4e-51
Identities = 146/166 (88%), Gaps = 1/166 (1%)
Strand=Plus/Minus
Query 91 ATCCCCATCACGATGAAATTTCAAAGATTACCCGGACCTGTCGGCCAAGGTGATAGACTC 150
||||||||||||||||||||||| ||||||| ||| ||||||| ||||| ||||||||
Sbjct 442 ATCCCCATCACGATGAAATTTCAGAGATTACTCGGGCCTGTCGACCAAGACTATAGACTC 383
Query 151 GTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTG 210
||||||||||||||||||||||||||| ||||| |||||||||||||||||||| || ||
Sbjct 382 GTTGAATACATCAGTGTAGCGCGCGTGGGGCCCGGAACATCTAAGGGCATCACATACTTG 323
Query 211 TTATTGCCTCAAACTTCCGTGGCCTAAAAGGCCAT-CTCCCTCGAA 255
|||||||||||||||| |||| ||| |||||| |||||| ||
Sbjct 322 TTATTGCCTCAAACTTTTATGGCTTAAGCGGCCATAGTCCCTCTAA 277
Score = 145 bits (160), Expect = 1e-32
Identities = 106/122 (87%), Gaps = 1/122 (1%)
Strand=Plus/Minus
Query 135 CCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAA 194
||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct 126 CCAAGACTATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGGGGCCCGGAACATCTAA 67
Query 195 GGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAGGCCAT-CTCCCTCG 253
|||||||||| || |||||||||||||||||| |||| ||| |||||| ||||||
Sbjct 66 GGGCATCACATACTTGTTATTGCCTCAAACTTTTATGGCTTAAGCGGCCATAGTCCCTCT 7
Query 254 AA 255
||
Sbjct 6 AA 5
>seq28020
Length=5307
Score = 163 bits (180), Expect = 4e-38
Identities = 97/99 (98%), Gaps = 2/99 (2%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct 4712 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCT-GATGACTCGCGCTTACTAGGAATT-C 4655
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATC 99
|||||||||||||||||||||||||||||||||||||||
Sbjct 4654 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATC 4616
>seq31343
Length=16520
Score = 96.9 bits (106), Expect = 5e-18
Identities = 157/221 (71%), Gaps = 9/221 (4%)
Strand=Plus/Minus
Query 19 TAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTCGTTGAAGACCAACAA 78
|||||||| | || || ||||| | | ||||||| |||| |||||| |||| |
Sbjct 11227 TAGTCAACACAAG-TTCATGACCCACACTTACTAAATATTTT---GTTGAAAACCAG--A 11174
Query 79 TTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTACCCGGACCTGTCGGCCAA 138
|| |||||| ||||| ||| ||||||||||||| ||||| | | ||| || |
Sbjct 11173 TTT-AATGATTTATCCTTTTCAATATGAAATTTCAAATATTACTTAGGCTAGTCAACCCA 11115
Query 139 GGTGATAGACTCGTTGAATACATCAGTGTA--GCGCGCGTGCGGCCCAGAACATCTAAGG 196
|| ||| ||| ||||||||||||| || | || | | | |||| | ||||||||
Sbjct 11114 GGCTATAAACTTGTTGAATACATCAACATAGTGTGCACATAAGACCCAAACCATCTAAGC 11055
Query 197 GCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAA 237
||||| | || | |||||| | ||||||||| || ||||
Sbjct 11054 ACATCATATACTTATTATTGTCACAAACTTCCATGATCTAA 11014
>seq2999
Length=10881
Score = 73.4 bits (80), Expect = 6e-11
Identities = 44/45 (98%), Gaps = 1/45 (2%)
Strand=Plus/Plus
Query 47 TTACTAGGAATTTCCTCGTTGAAGACCAACAATTGCAATGATCTA 91
|||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 358 TTACTAGGAATT-CCTCGTTGAAGACCAACAATTGCAATGATCTA 401
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 750367905025
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |