Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687 525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq50471 275 9e-72 seq40580 275 9e-72 seq18959 206 4e-51 seq28020 163 4e-38 seq31343 96.9 5e-18 seq2999 73.4 6e-11 >seq50471 Length=14951 Score = 275 bits (304), Expect = 9e-72 Identities = 180/196 (92%), Gaps = 3/196 (2%) Strand=Plus/Minus Query 50 CTAGGAATTTCCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAAT 109 ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 2156 CTAGGAATT-CCTCGTTGAAAACCAACAATTGCAATGATCTATCCCCATCACGATGAAAT 2098 Query 110 TTCAAAGATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAG 169 ||||||||||||| | | ||||||||| || ||| ||||||||||||||||||||||| Sbjct 2097 TTCAAAGATTACCTGAGCTTGTCGGCCATGGCTATAAACTCGTTGAATACATCAGTGTAG 2038 Query 170 CGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCG 229 ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| Sbjct 2037 CGCGCGTGCGGCCCATAACATCTAAGGACATCACAGACCTGTTATTGCCTCAAACTTCCG 1978 Query 230 TGGCCTAAAAGGCCAT 245 ||| ||| |||||| Sbjct 1977 TGG--TAAGTGGCCAT 1964 >seq40580 Length=5286 Score = 275 bits (304), Expect = 9e-72 Identities = 180/196 (92%), Gaps = 3/196 (2%) Strand=Plus/Plus Query 50 CTAGGAATTTCCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAAT 109 ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 5065 CTAGGAATT-CCTCGTTGAAAACCAACAATTGCAATGATCTATCCCCATCACGATGAAAT 5123 Query 110 TTCAAAGATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAG 169 ||||||||||||| | | ||||||||| || ||| ||||||||||||||||||||||| Sbjct 5124 TTCAAAGATTACCTGAGCTTGTCGGCCATGGCTATAAACTCGTTGAATACATCAGTGTAG 5183 Query 170 CGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCG 229 ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| Sbjct 5184 CGCGCGTGCGGCCCATAACATCTAAGGACATCACAGACCTGTTATTGCCTCAAACTTCCG 5243 Query 230 TGGCCTAAAAGGCCAT 245 ||| ||| |||||| Sbjct 5244 TGG--TAAGTGGCCAT 5257 >seq18959 Length=580 Score = 206 bits (228), Expect = 4e-51 Identities = 146/166 (88%), Gaps = 1/166 (1%) Strand=Plus/Minus Query 91 ATCCCCATCACGATGAAATTTCAAAGATTACCCGGACCTGTCGGCCAAGGTGATAGACTC 150 ||||||||||||||||||||||| ||||||| ||| ||||||| ||||| |||||||| Sbjct 442 ATCCCCATCACGATGAAATTTCAGAGATTACTCGGGCCTGTCGACCAAGACTATAGACTC 383 Query 151 GTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTG 210 ||||||||||||||||||||||||||| ||||| |||||||||||||||||||| || || Sbjct 382 GTTGAATACATCAGTGTAGCGCGCGTGGGGCCCGGAACATCTAAGGGCATCACATACTTG 323 Query 211 TTATTGCCTCAAACTTCCGTGGCCTAAAAGGCCAT-CTCCCTCGAA 255 |||||||||||||||| |||| ||| |||||| |||||| || Sbjct 322 TTATTGCCTCAAACTTTTATGGCTTAAGCGGCCATAGTCCCTCTAA 277 Score = 145 bits (160), Expect = 1e-32 Identities = 106/122 (87%), Gaps = 1/122 (1%) Strand=Plus/Minus Query 135 CCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAA 194 ||||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct 126 CCAAGACTATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGGGGCCCGGAACATCTAA 67 Query 195 GGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAGGCCAT-CTCCCTCG 253 |||||||||| || |||||||||||||||||| |||| ||| |||||| |||||| Sbjct 66 GGGCATCACATACTTGTTATTGCCTCAAACTTTTATGGCTTAAGCGGCCATAGTCCCTCT 7 Query 254 AA 255 || Sbjct 6 AA 5 >seq28020 Length=5307 Score = 163 bits (180), Expect = 4e-38 Identities = 97/99 (98%), Gaps = 2/99 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | Sbjct 4712 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCT-GATGACTCGCGCTTACTAGGAATT-C 4655 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATC 99 ||||||||||||||||||||||||||||||||||||||| Sbjct 4654 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATC 4616 >seq31343 Length=16520 Score = 96.9 bits (106), Expect = 5e-18 Identities = 157/221 (71%), Gaps = 9/221 (4%) Strand=Plus/Minus Query 19 TAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTCGTTGAAGACCAACAA 78 |||||||| | || || ||||| | | ||||||| |||| |||||| |||| | Sbjct 11227 TAGTCAACACAAG-TTCATGACCCACACTTACTAAATATTTT---GTTGAAAACCAG--A 11174 Query 79 TTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTACCCGGACCTGTCGGCCAA 138 || |||||| ||||| ||| ||||||||||||| ||||| | | ||| || | Sbjct 11173 TTT-AATGATTTATCCTTTTCAATATGAAATTTCAAATATTACTTAGGCTAGTCAACCCA 11115 Query 139 GGTGATAGACTCGTTGAATACATCAGTGTA--GCGCGCGTGCGGCCCAGAACATCTAAGG 196 || ||| ||| ||||||||||||| || | || | | | |||| | |||||||| Sbjct 11114 GGCTATAAACTTGTTGAATACATCAACATAGTGTGCACATAAGACCCAAACCATCTAAGC 11055 Query 197 GCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAA 237 ||||| | || | |||||| | ||||||||| || |||| Sbjct 11054 ACATCATATACTTATTATTGTCACAAACTTCCATGATCTAA 11014 >seq2999 Length=10881 Score = 73.4 bits (80), Expect = 6e-11 Identities = 44/45 (98%), Gaps = 1/45 (2%) Strand=Plus/Plus Query 47 TTACTAGGAATTTCCTCGTTGAAGACCAACAATTGCAATGATCTA 91 |||||||||||| |||||||||||||||||||||||||||||||| Sbjct 358 TTACTAGGAATT-CCTCGTTGAAGACCAACAATTGCAATGATCTA 401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 750367905025