Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= AAMG01000190.1
Length=117
Score E
Sequences producing significant alignments: (Bits) Value
seq73609 86.0 3e-15
seq12752 86.0 3e-15
seq97938 73.4 2e-11
>seq73609
Length=5445
Score = 86.0 bits (94), Expect = 3e-15
Identities = 59/67 (88%), Gaps = 0/67 (0%)
Strand=Plus/Minus
Query 51 AACATCGCCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCG 110
|||||| | ||||||| |||||||| ||||| |||| |||||| |||||||||||||||
Sbjct 5184 AACATCCGCTGATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCG 5125
Query 111 TCTTCGA 117
|||||||
Sbjct 5124 TCTTCGA 5118
>seq12752
Length=18805
Score = 86.0 bits (94), Expect = 3e-15
Identities = 59/67 (88%), Gaps = 0/67 (0%)
Strand=Plus/Minus
Query 51 AACATCGCCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCG 110
|||||| | ||||||| |||||||| ||||| |||| |||||| |||||||||||||||
Sbjct 15747 AACATCCGCTGATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCG 15688
Query 111 TCTTCGA 117
|||||||
Sbjct 15687 TCTTCGA 15681
>seq97938
Length=202
Score = 73.4 bits (80), Expect = 2e-11
Identities = 78/103 (76%), Gaps = 0/103 (0%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||| ||||||||||||| ||| ||| | | ||||| || |||||||
Sbjct 165 GAACCCAAACACTTTGATTTCTCATAACGTGTCAATGGAGTCCTAAAAGCAACATCGGTT 106
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTAT 103
||||||| || || || ||||| |||| |||||| || | |||
Sbjct 105 GATCCCTGGTTGGAATCGTTTATGGTTGAGACTAGGATGATAT 63
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 277815268650
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |