Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687 525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq12752 212 1e-52 seq1483 143 5e-32 seq192606 75.2 2e-11 >seq12752 Length=18805 Score = 212 bits (234), Expect = 1e-52 Identities = 198/248 (80%), Gaps = 3/248 (1%) Strand=Plus/Plus Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130 || |||||||||| ||| |||||| |||||||| |||| |||| | |||||||||||| Sbjct 15434 CTATTACTTTGAAGAAAGTAGAGTCCTCAAAGCAAGCCTACGCTCTGGATACATTAGCAT 15493 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190 || || | | | |||| | | | |||| |||||| | | ||| || |||||||| Sbjct 15494 GGGATGACACCACAGGAT-TCTGATCCTATCTTGTTGCTCTTCGGGATCGGAGTAATGAT 15552 Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250 ||| ||||| ||||||||| | ||||| || |||||||||||||||||||||||||| Sbjct 15553 TAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 15612 Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310 ||||| ||| ||||||||||| || |||||||||||||||||||||| |||||||| Sbjct 15613 GAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAA 15671 Query 311 GTTAGGGG 318 ||| |||| Sbjct 15672 GTTGGGGG 15679 >seq1483 Length=11525 Score = 143 bits (158), Expect = 5e-32 Identities = 178/240 (74%), Gaps = 3/240 (1%) Strand=Plus/Plus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCATGGA 133 ||||||| || |||||||||| |||||||| |||| ||||| | |||||||||||||| Sbjct 11288 TTACTTTAAAGAAATTAGAGTTCTCAAAGCAAGCCTATGCTCTGGATACATTAGCATGGG 11347 Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193 |||| | | |||| | | | ||||| |||||| | | ||| || ||||||||||| Sbjct 11348 ATAACACCACAGGAT-TCTGATCCTATTGTGTTGGCCTTTGGGATCGGAGTAATGATTAA 11406 Query 194 TAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGA 253 | ||| ||||| | | |||| || ||| | ||||| |||||||||||| | Sbjct 11407 CAAGGACAGTCGACGACATTCATATTTCATAGTCCAATTTGAAAGTCTTGGATTTATGAA 11466 Query 254 AGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTT 313 |||| ||| | | | ||| | || | |||||||||||||||||| ||||||||||| Sbjct 11467 AGACGAACAAGTACTAAACCATTTGCAGTGGATGTTTTCATTAATCA-AGAACGAAAGTT 11525 >seq192606 Length=639 Score = 75.2 bits (82), Expect = 2e-11 Identities = 165/243 (68%), Gaps = 11/243 (5%) Strand=Plus/Plus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAA-TACATTAGCATGGA 133 |||||||||| ||| ||||||| | |||| | | | || || ||||||||||| || Sbjct 245 TTACTTTGAAGAAACTAGAGTGCTTAAAGAAAACTTACACTTTAAATACATTAGCATAGA 304 Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193 ||| | | | || | | |||| |||| | | |||| | ||||| ||||| Sbjct 305 GTAAAACTACATGAT-TCTAATGCTATCGTGTTAGCATTCAGGATCAAAGTAATAATTAA 363 Query 194 TAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGA 253 ||||| | | ||| | |||| || |||| ||||||||||||| ||||| | | Sbjct 364 CAGGGACAATTAAGGGCATTCATATTTCATAGTCATAGGTGAAATTCTT-GATTTTATAA 422 Query 254 AGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTT 313 || ||| | ||| ||| | || ||||| || |||| |||||| |||||||||| Sbjct 423 AG---AACAATTGCAAAATCATTTGCCAAGAATATTTTAATTAAT-----AACGAAAGTT 474 Query 314 AGG 316 || Sbjct 475 GGG 477 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 913149631680