Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq12752 212 1e-52
seq1483 143 5e-32
seq192606 75.2 2e-11
>seq12752
Length=18805
Score = 212 bits (234), Expect = 1e-52
Identities = 198/248 (80%), Gaps = 3/248 (1%)
Strand=Plus/Plus
Query 72 CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCAT 130
|| |||||||||| ||| |||||| |||||||| |||| |||| | ||||||||||||
Sbjct 15434 CTATTACTTTGAAGAAAGTAGAGTCCTCAAAGCAAGCCTACGCTCTGGATACATTAGCAT 15493
Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190
|| || | | | |||| | | | |||| |||||| | | ||| || ||||||||
Sbjct 15494 GGGATGACACCACAGGAT-TCTGATCCTATCTTGTTGCTCTTCGGGATCGGAGTAATGAT 15552
Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250
||| ||||| ||||||||| | ||||| || ||||||||||||||||||||||||||
Sbjct 15553 TAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 15612
Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310
||||| ||| ||||||||||| || |||||||||||||||||||||| ||||||||
Sbjct 15613 GAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAA 15671
Query 311 GTTAGGGG 318
||| ||||
Sbjct 15672 GTTGGGGG 15679
>seq1483
Length=11525
Score = 143 bits (158), Expect = 5e-32
Identities = 178/240 (74%), Gaps = 3/240 (1%)
Strand=Plus/Plus
Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCATGGA 133
||||||| || |||||||||| |||||||| |||| ||||| | ||||||||||||||
Sbjct 11288 TTACTTTAAAGAAATTAGAGTTCTCAAAGCAAGCCTATGCTCTGGATACATTAGCATGGG 11347
Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193
|||| | | |||| | | | ||||| |||||| | | ||| || |||||||||||
Sbjct 11348 ATAACACCACAGGAT-TCTGATCCTATTGTGTTGGCCTTTGGGATCGGAGTAATGATTAA 11406
Query 194 TAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGA 253
| ||| ||||| | | |||| || ||| | ||||| |||||||||||| |
Sbjct 11407 CAAGGACAGTCGACGACATTCATATTTCATAGTCCAATTTGAAAGTCTTGGATTTATGAA 11466
Query 254 AGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTT 313
|||| ||| | | | ||| | || | |||||||||||||||||| |||||||||||
Sbjct 11467 AGACGAACAAGTACTAAACCATTTGCAGTGGATGTTTTCATTAATCA-AGAACGAAAGTT 11525
>seq192606
Length=639
Score = 75.2 bits (82), Expect = 2e-11
Identities = 165/243 (68%), Gaps = 11/243 (5%)
Strand=Plus/Plus
Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAA-TACATTAGCATGGA 133
|||||||||| ||| ||||||| | |||| | | | || || ||||||||||| ||
Sbjct 245 TTACTTTGAAGAAACTAGAGTGCTTAAAGAAAACTTACACTTTAAATACATTAGCATAGA 304
Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193
||| | | | || | | |||| |||| | | |||| | ||||| |||||
Sbjct 305 GTAAAACTACATGAT-TCTAATGCTATCGTGTTAGCATTCAGGATCAAAGTAATAATTAA 363
Query 194 TAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGA 253
||||| | | ||| | |||| || |||| ||||||||||||| ||||| | |
Sbjct 364 CAGGGACAATTAAGGGCATTCATATTTCATAGTCATAGGTGAAATTCTT-GATTTTATAA 422
Query 254 AGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTT 313
|| ||| | ||| ||| | || ||||| || |||| |||||| ||||||||||
Sbjct 423 AG---AACAATTGCAAAATCATTTGCCAAGAATATTTTAATTAAT-----AACGAAAGTT 474
Query 314 AGG 316
||
Sbjct 475 GGG 477
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 913149631680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |