Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687 525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq51739 242 2e-61 seq23320 242 2e-61 seq13226 242 2e-61 seq87307 163 1e-37 seq14869 163 1e-37 seq39499 123 1e-25 seq160367 122 4e-25 seq25689 122 4e-25 seq27937 104 1e-19 seq10688 104 1e-19 seq4596 104 1e-19 seq117561 95.1 5e-17 seq19801 86.0 3e-14 >seq51739 Length=26148 Score = 242 bits (268), Expect = 2e-61 Identities = 227/283 (80%), Gaps = 7/283 (2%) Strand=Plus/Minus Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTC-A 463 |||||||||||| ||||||||||||||||||| |||| | ||||||| ||||| | Sbjct 23655 CGGCCCGTCTTGAAACACGGACCAAGGAGTCTGACATGTGTGCGAGTCAACGGGTGAGTA 23596 Query 464 AACCCGTGCG-CGTAATGAAAGTGAACGGAGGTGGGAACCCGT-GAGGGT-GCACCATCG 520 ||| ||| | || || ||| ||| || ||||| ||| | | |||| ||||| || Sbjct 23595 AACTCGTAAGGCGCAAGGAAGCTGATTGG---TGGGATCCCCTTGTGGGTTGCACCGCCG 23539 Query 521 ACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGA 580 ||||| |||||| | || || || |||| |||||||| |||| ||||||||||||| Sbjct 23538 ACCGACCCTGATCATATGTGAAGGGTTCGAGTGAGAGCATACCTGTCGGGACCCGAAAGA 23479 Query 581 TGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGG 640 ||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||| Sbjct 23478 TGGTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGA 23419 Query 641 TTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 | ||| ||||||||||| ||||| | |||||||||||||||| Sbjct 23418 TACTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGA 23376 Score = 158 bits (174), Expect = 5e-36 Identities = 134/165 (81%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94 ||| ||||||| |||||||||||||||||| | || ||| |||||||| | || || || Sbjct 24041 TCGGCGAGTCGGGTTGTTTGGGAATGCAGCCCCAATCGGGCGGTAAATTCCGTCCAAGGC 23982 Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154 |||||| ||| |||||||||| ||| ||||||| | || ||||||||||||| |||| Sbjct 23981 TAAATACTGGTGAGAGACCGATGGCGAACAAGTACCGCGAGGGAAAGATGAAAAGGACTT 23922 Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 || ||||||||| ||| || | ||||||||| | ||||||||| Sbjct 23921 TGAAAAGAGAGTCAAAGAGTGCTTGAAATTGTCGGGAGGGAAGCG 23877 >seq23320 Length=16646 Score = 242 bits (268), Expect = 2e-61 Identities = 227/283 (80%), Gaps = 7/283 (2%) Strand=Plus/Plus Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTC-A 463 |||||||||||| ||||||||||||||||||| |||| | ||||||| ||||| | Sbjct 4328 CGGCCCGTCTTGAAACACGGACCAAGGAGTCTGACATGTGTGCGAGTCAACGGGTGAGTA 4387 Query 464 AACCCGTGCG-CGTAATGAAAGTGAACGGAGGTGGGAACCCGT-GAGGGT-GCACCATCG 520 ||| ||| | || |||||| ||| || ||||| ||| | | |||| ||||| || Sbjct 4388 AACTCGTAAGGCGCAATGAAGCTGATTGG---TGGGATCCCCTTGTGGGTTGCACCGCCG 4444 Query 521 ACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGA 580 ||||| |||||| | || || || |||| |||||||| |||| ||||||||||||| Sbjct 4445 ACCGACCCTGATCATATGTGAAGGGTTCGAGTGAGAGCATACCTGTCGGGACCCGAAAGA 4504 Query 581 TGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGG 640 ||||||||||| ||||| ||| ||||||||||||||||||||||||||| ||||||| Sbjct 4505 TGGTGAACTATTCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGA 4564 Query 641 TTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 | ||| ||||||||||| ||||| | |||||||||||||||| Sbjct 4565 TACTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGA 4607 >seq13226 Length=12949 Score = 242 bits (268), Expect = 2e-61 Identities = 227/283 (80%), Gaps = 7/283 (2%) Strand=Plus/Minus Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTC-A 463 |||||||||||| ||||||||||||||||||| |||| | ||||||| ||||| | Sbjct 7495 CGGCCCGTCTTGAAACACGGACCAAGGAGTCTGACATGTGTGCGAGTCAACGGGTGAGTA 7436 Query 464 AACCCGTGCG-CGTAATGAAAGTGAACGGAGGTGGGAACCCGT-GAGGGT-GCACCATCG 520 ||| ||| | || || ||| ||| || ||||| ||| | | |||| ||||| || Sbjct 7435 AACTCGTAAGGCGCAAGGAAGCTGATTGG---TGGGATCCCCTTGTGGGTTGCACCGCCG 7379 Query 521 ACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGA 580 ||||| |||||| | || || || |||| |||||||| |||| ||||||||||||| Sbjct 7378 ACCGACCCTGATCATATGTGAAGGGTTCGAGTGAGAGCATACCTGTCGGGACCCGAAAGA 7319 Query 581 TGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGG 640 ||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||| Sbjct 7318 TGGTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGA 7259 Query 641 TTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 | ||| ||||||||||| ||||| | |||||||||||||||| Sbjct 7258 TACTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGA 7216 >seq87307 Length=6807 Score = 163 bits (180), Expect = 1e-37 Identities = 135/165 (82%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94 ||| ||||||| |||||||||||||||||| | || ||| |||||||| | || || || Sbjct 2904 TCGGCGAGTCGGGTTGTTTGGGAATGCAGCCCCAATCGGGCGGTAAATTCCGTCCAAGGC 2845 Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154 |||||| ||| |||||||||||||| ||||||| | || ||||||||||||| |||| Sbjct 2844 TAAATACTGGTGAGAGACCGATAGCGAACAAGTACCGCGAGGGAAAGATGAAAAGGACTT 2785 Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 || ||||||||| ||| || | ||||||||| | ||||||||| Sbjct 2784 TGAAAAGAGAGTCAAAGAGTGCTTGAAATTGTCGGGAGGGAAGCG 2740 >seq14869 Length=26102 Score = 163 bits (180), Expect = 1e-37 Identities = 135/165 (82%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94 ||| ||||||| |||||||||||||||||| | || ||| |||||||| | || || || Sbjct 23465 TCGGCGAGTCGGGTTGTTTGGGAATGCAGCCCCAATCGGGCGGTAAATTCCGTCCAAGGC 23406 Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154 |||||| ||| |||||||||||||| ||||||| | || ||||||||||||| |||| Sbjct 23405 TAAATACTGGTGAGAGACCGATAGCGAACAAGTACCGCGAGGGAAAGATGAAAAGGACTT 23346 Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 || ||||||||| ||| || | ||||||||| | ||||||||| Sbjct 23345 TGAAAAGAGAGTAAAAGAGTGCTTGAAATTGTCGGGAGGGAAGCG 23301 >seq39499 Length=5887 Score = 123 bits (136), Expect = 1e-25 Identities = 110/138 (80%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 59 TGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAG 118 |||||| | || ||| |||||||| | || || |||||||| ||| |||||||||||| Sbjct 5496 TGCAGCCCCAATCGGGCGGTAAATTCCGTCCAAGGCTAAATACTGGTGAGAGACCGATAG 5555 Query 119 CGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGT 178 || ||||||| | || ||||||||||||| |||||| ||||||||| ||| || | | Sbjct 5556 CGAACAAGTACCGCGAGGGAAAGATGAAAAGGACTTTGAAAAGAGAGTCAAAGAGTGCTT 5615 Query 179 GAAATTGTTGAAAGGGAA 196 |||||||| | |||||| Sbjct 5616 GAAATTGTCGGGAGGGAA 5633 >seq160367 Length=363 Score = 122 bits (134), Expect = 4e-25 Identities = 123/160 (77%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| ||||||||||||| | || ||| |||||| | | ||||| ||||||| Sbjct 173 GAGTCGGGTTGCTTGGGAATGCAGCCCAAAGCGGGTGGTAAACTCCATCTAAGGCTAAAT 232 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 | ||| ||||||||||| ||||||| || | ||||| ||||||| |||||| | Sbjct 233 ACCGGCACGAGACCGATAGTCAACAAGTACCGTAAGGGAAAGTTGAAAAGAACTTTGAAG 292 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 |||||||| || || ||||||| ||| | ||| || || Sbjct 293 AGAGAGTTCAAGAGGGCGTGAAACCGTTAAGAGGTAAACG 332 >seq25689 Length=4009 Score = 122 bits (134), Expect = 4e-25 Identities = 79/87 (91%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 549 GAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAG 608 |||| |||||||| |||| |||||||||||||||||||||||||||||| ||| |||| Sbjct 2167 GAGTGAGAGCATACCTGTCGGGACCCGAAAGATGGTGAACTATGCCTGAGCGGGGCGAAG 2108 Query 609 CCAGAGGAAACTCTGGTGGAGGCTCGC 635 ||||||||||||||||||||||| ||| Sbjct 2107 CCAGAGGAAACTCTGGTGGAGGCCCGC 2081 >seq27937 Length=19406 Score = 104 bits (114), Expect = 1e-19 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 607 AGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAA 666 ||||||||||||||||||||||||| ||||||| | ||| ||||||||||| ||||| | Sbjct 19042 AGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGATACTGACGTGCAAATCGTTCGTCTGA 19101 Query 667 TTTGGGTATAGGGGCGA 683 |||||||||||||||| Sbjct 19102 CTTGGGTATAGGGGCGA 19118 >seq10688 Length=11384 Score = 104 bits (114), Expect = 1e-19 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 607 AGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAA 666 ||||||||||||||||||||||||| ||||||| | ||| ||||||||||| ||||| | Sbjct 11051 AGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGATACTGACGTGCAAATCGTTCGTCTGA 10992 Query 667 TTTGGGTATAGGGGCGA 683 |||||||||||||||| Sbjct 10991 CTTGGGTATAGGGGCGA 10975 >seq4596 Length=972 Score = 104 bits (114), Expect = 1e-19 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 607 AGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAA 666 ||||||||||||||||||||||||| ||||||| | ||| ||||||||||| ||||| | Sbjct 763 AGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGATACTGACGTGCAAATCGTTCGTCTGA 704 Query 667 TTTGGGTATAGGGGCGA 683 |||||||||||||||| Sbjct 703 CTTGGGTATAGGGGCGA 687 >seq117561 Length=229 Score = 95.1 bits (104), Expect = 5e-17 Identities = 60/65 (92%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623 |||| |||||||||||||||||||||||||||| |||| ||||||||||||||||||| Sbjct 65 TGTTAGGACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTG 6 Query 624 GTGGA 628 ||||| Sbjct 5 GTGGA 1 >seq19801 Length=18211 Score = 86.0 bits (94), Expect = 3e-14 Identities = 67/80 (84%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 107 AGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGT 166 |||||||||||||| ||||||| | || ||||||||||||| |||||| ||||||||| Sbjct 17748 AGAGACCGATAGCGAACAAGTACCGCGAGGGAAAGATGAAAAGGACTTTGAAAAGAGAGT 17807 Query 167 TAAAAAGCACGTGAAATTGT 186 ||| || | ||||||||| Sbjct 17808 CAAAGAGTGCTTGAAATTGT 17827 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2075194449250