Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687 525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq20863 165 2e-38 seq31780 122 2e-25 seq47232 82.4 2e-13 >seq20863 Length=629 Score = 165 bits (182), Expect = 2e-38 Identities = 166/214 (78%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 |||| ||||||| || || |||||| ||||||| ||||||| | | |||||| Sbjct 525 GCATTTTCACAGACATGTCTATTTCATCGAGTCTCTCTCCGAGACAGTGTCCAAATCGTT 466 Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132 ||| | ||||||| ||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 465 ACGTCTTTCGTGCGGGTCGAAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 406 Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGC-GTTAGC---TAACCC 188 | |||||| ||||||| ||||||||||| || ||| | | || | | | ||| Sbjct 405 TAGTTACGATCGCCGTTCACCGGGGCTTCTGTCGTCGGCTCCCCTGTCATCAAGTCACCA 346 Query 189 CATCAATTAACCTTCCGGCACCGGGCAGGCGTCA 222 | || |||||||||||| |||||||||||| Sbjct 345 ACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCA 312 >seq31780 Length=18751 Score = 122 bits (134), Expect = 2e-25 Identities = 118/152 (78%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 ||||||||||| || ||||||||||||| ||| | ||| |||| || ||||| Sbjct 9773 GCATCTTCACAAAGAATTCAATTTCACTGGGTCCATGTCAGAGGTAGCGGGGCAGTCGTT 9714 Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132 || ||||||||| |||||| ||||| |||||||||||||||| |||||||||| |||| Sbjct 9713 ACACCATTCGTGTAGGTCGCTACTTATGCGACAAGGAATTTCGCCACCTTAGGACAGTTA 9654 Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGAT 164 ||||| || | ||||| | ||||| ||| Sbjct 9653 GAGTTACTGCTGTTGTTTATTGAGGCTTTGAT 9622 >seq47232 Length=39093 Score = 82.4 bits (90), Expect = 2e-13 Identities = 72/90 (80%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 337 GGCGCACCTTCTCCCGAAGTTACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCT 396 ||| | ||||||||||||||||||| || ||||||| |||||||| ||||| ||| Sbjct 25582 GGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTAGAGAGAGTTGTCT 25523 Query 397 CAAGCGCCTTGGTATTCTCTACCCAACCAC 426 | || ||| ||||||||||||| | |||| Sbjct 25522 CGCGCCCCTAGGTATTCTCTACCTACCCAC 25493 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1257975366720