Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= AAMG01000636.1
Length=426
Score E
Sequences producing significant alignments: (Bits) Value
seq20863 165 2e-38
seq31780 122 2e-25
seq47232 82.4 2e-13
>seq20863
Length=629
Score = 165 bits (182), Expect = 2e-38
Identities = 166/214 (78%), Gaps = 4/214 (2%)
Strand=Plus/Minus
Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72
|||| ||||||| || || |||||| ||||||| ||||||| | | ||||||
Sbjct 525 GCATTTTCACAGACATGTCTATTTCATCGAGTCTCTCTCCGAGACAGTGTCCAAATCGTT 466
Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132
||| | ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 465 ACGTCTTTCGTGCGGGTCGAAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 406
Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGC-GTTAGC---TAACCC 188
| |||||| ||||||| ||||||||||| || ||| | | || | | | |||
Sbjct 405 TAGTTACGATCGCCGTTCACCGGGGCTTCTGTCGTCGGCTCCCCTGTCATCAAGTCACCA 346
Query 189 CATCAATTAACCTTCCGGCACCGGGCAGGCGTCA 222
| || |||||||||||| ||||||||||||
Sbjct 345 ACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCA 312
>seq31780
Length=18751
Score = 122 bits (134), Expect = 2e-25
Identities = 118/152 (78%), Gaps = 0/152 (0%)
Strand=Plus/Minus
Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72
||||||||||| || ||||||||||||| ||| | ||| |||| || |||||
Sbjct 9773 GCATCTTCACAAAGAATTCAATTTCACTGGGTCCATGTCAGAGGTAGCGGGGCAGTCGTT 9714
Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132
|| ||||||||| |||||| ||||| |||||||||||||||| |||||||||| ||||
Sbjct 9713 ACACCATTCGTGTAGGTCGCTACTTATGCGACAAGGAATTTCGCCACCTTAGGACAGTTA 9654
Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGAT 164
||||| || | ||||| | ||||| |||
Sbjct 9653 GAGTTACTGCTGTTGTTTATTGAGGCTTTGAT 9622
>seq47232
Length=39093
Score = 82.4 bits (90), Expect = 2e-13
Identities = 72/90 (80%), Gaps = 0/90 (0%)
Strand=Plus/Minus
Query 337 GGCGCACCTTCTCCCGAAGTTACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCT 396
||| | ||||||||||||||||||| || ||||||| |||||||| ||||| |||
Sbjct 25582 GGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTAGAGAGAGTTGTCT 25523
Query 397 CAAGCGCCTTGGTATTCTCTACCCAACCAC 426
| || ||| ||||||||||||| | ||||
Sbjct 25522 CGCGCCCCTAGGTATTCTCTACCTACCCAC 25493
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1257975366720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |