Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687 525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq160367 91.5 7e-17 seq87307 77.0 1e-12 seq18186 77.0 1e-12 >seq160367 Length=363 Score = 91.5 bits (100), Expect = 7e-17 Identities = 52/53 (98%), Gaps = 0/53 (0%) Strand=Plus/Plus Query 50 AGAGCCCAGCGCCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 |||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 1 AGAGCCCAGCGCCGAATCCCCGCCCCGCGGCGGGGCGCGGGACATGTGGCGTA 53 >seq87307 Length=6807 Score = 77.0 bits (84), Expect = 1e-12 Identities = 51/57 (89%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCA 57 ||||||||||||||| ||||||||| |||||||||||| |||| ||||| |||||| Sbjct 3107 GGAAAAGAAACTAACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAACAGCCCA 3051 >seq18186 Length=26185 Score = 77.0 bits (84), Expect = 1e-12 Identities = 51/57 (89%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCA 57 ||||||||||||||| ||||||||| |||||||||||| |||| ||||| |||||| Sbjct 12533 GGAAAAGAAACTAACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAACAGCCCA 12589 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 229916084400