Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= AAMG01000753.1
Length=364
Score E
Sequences producing significant alignments: (Bits) Value
seq20863 187 5e-45
seq31780 100 6e-19
seq2983 84.2 5e-14
seq36933 78.8 2e-12
seq47232 73.4 8e-11
seq42583 73.4 8e-11
>seq20863
Length=629
Score = 187 bits (206), Expect = 5e-45
Identities = 172/216 (80%), Gaps = 4/216 (2%)
Strand=Plus/Minus
Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66
|||| ||||| | || | |||||| ||||||| | ||||||||| ||||||||||
Sbjct 525 GCATTTTCACAGACATGTCTATTTCATCGAGTCTCTCTCCGAGACAGTGTCCAAATCGTT 466
Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126
||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 465 ACGTCTTTCGTGCGGGTCGAAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 406
Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGAT-TGCTC---TAACAG 182
|||||||| ||||||| || ||||||| || | ||| | | | || | ||
Sbjct 405 TAGTTACGATCGCCGTTCACCGGGGCTTCTGTCGTCGGCTCCCCTGTCATCAAGTCACCA 346
Query 183 ATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGC 218
| |||| ||||||| |||| ||||||||||||||
Sbjct 345 ACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGC 310
>seq31780
Length=18751
Score = 100 bits (110), Expect = 6e-19
Identities = 111/148 (75%), Gaps = 0/148 (0%)
Strand=Plus/Minus
Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66
|||||||||| || | ||||||||| | ||| || ||| || | | |||||
Sbjct 9773 GCATCTTCACAAAGAATTCAATTTCACTGGGTCCATGTCAGAGGTAGCGGGGCAGTCGTT 9714
Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126
|| || |||||| ||||| ||||| |||||||||||||||| |||||||||| ||||
Sbjct 9713 ACACCATTCGTGTAGGTCGCTACTTATGCGACAAGGAATTTCGCCACCTTAGGACAGTTA 9654
Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTT 154
|||||| || | ||||| || |||||
Sbjct 9653 GAGTTACTGCTGTTGTTTATTGAGGCTT 9626
>seq2983
Length=28127
Score = 84.2 bits (92), Expect = 5e-14
Identities = 76/96 (79%), Gaps = 0/96 (0%)
Strand=Plus/Minus
Query 200 GCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAGAAACCTGTGTTTT 259
|||| |||| ||||||| || |||||| ||||| |||||| || || | || ||||||
Sbjct 15392 GCACTGGGCGAGCGTCAGTCCCCATACATGGTCTTACGACTTTGCGGAGATCTATGTTTT 15333
Query 260 TGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCT 295
||||||||||||| | ||| || || ||||| |||
Sbjct 15332 TGGTAAACAGTCGTTCGGGTCTGGTCACTGCGACCT 15297
>seq36933
Length=8473
Score = 78.8 bits (86), Expect = 2e-12
Identities = 52/58 (90%), Gaps = 0/58 (0%)
Strand=Plus/Plus
Query 94 CCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGG 151
|||||||| ||||||||||||||| || ||||||||||||| ||||||| |||||||
Sbjct 4124 CCGACAAGAAATTTCGCTACCTTAAGAACGTTATAGTTACGATCGCCGTTCACTGGGG 4181
>seq47232
Length=39093
Score = 73.4 bits (80), Expect = 8e-11
Identities = 45/48 (94%), Gaps = 0/48 (0%)
Strand=Plus/Minus
Query 305 AGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352
|||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct 25583 AGGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTA 25536
>seq42583
Length=31531
Score = 73.4 bits (80), Expect = 8e-11
Identities = 45/48 (94%), Gaps = 0/48 (0%)
Strand=Plus/Plus
Query 305 AGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352
|||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct 28072 AGGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTA 28119
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1060019852160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |