Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687 525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq20863 187 5e-45 seq31780 100 6e-19 seq2983 84.2 5e-14 seq36933 78.8 2e-12 seq47232 73.4 8e-11 seq42583 73.4 8e-11 >seq20863 Length=629 Score = 187 bits (206), Expect = 5e-45 Identities = 172/216 (80%), Gaps = 4/216 (2%) Strand=Plus/Minus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||| ||||| | || | |||||| ||||||| | ||||||||| |||||||||| Sbjct 525 GCATTTTCACAGACATGTCTATTTCATCGAGTCTCTCTCCGAGACAGTGTCCAAATCGTT 466 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 ||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 465 ACGTCTTTCGTGCGGGTCGAAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 406 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGAT-TGCTC---TAACAG 182 |||||||| ||||||| || ||||||| || | ||| | | | || | || Sbjct 405 TAGTTACGATCGCCGTTCACCGGGGCTTCTGTCGTCGGCTCCCCTGTCATCAAGTCACCA 346 Query 183 ATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGC 218 | |||| ||||||| |||| |||||||||||||| Sbjct 345 ACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGC 310 >seq31780 Length=18751 Score = 100 bits (110), Expect = 6e-19 Identities = 111/148 (75%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| || | ||||||||| | ||| || ||| || | | ||||| Sbjct 9773 GCATCTTCACAAAGAATTCAATTTCACTGGGTCCATGTCAGAGGTAGCGGGGCAGTCGTT 9714 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 || || |||||| ||||| ||||| |||||||||||||||| |||||||||| |||| Sbjct 9713 ACACCATTCGTGTAGGTCGCTACTTATGCGACAAGGAATTTCGCCACCTTAGGACAGTTA 9654 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTT 154 |||||| || | ||||| || ||||| Sbjct 9653 GAGTTACTGCTGTTGTTTATTGAGGCTT 9626 >seq2983 Length=28127 Score = 84.2 bits (92), Expect = 5e-14 Identities = 76/96 (79%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 200 GCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAGAAACCTGTGTTTT 259 |||| |||| ||||||| || |||||| ||||| |||||| || || | || |||||| Sbjct 15392 GCACTGGGCGAGCGTCAGTCCCCATACATGGTCTTACGACTTTGCGGAGATCTATGTTTT 15333 Query 260 TGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCT 295 ||||||||||||| | ||| || || ||||| ||| Sbjct 15332 TGGTAAACAGTCGTTCGGGTCTGGTCACTGCGACCT 15297 >seq36933 Length=8473 Score = 78.8 bits (86), Expect = 2e-12 Identities = 52/58 (90%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 94 CCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGG 151 |||||||| ||||||||||||||| || ||||||||||||| ||||||| ||||||| Sbjct 4124 CCGACAAGAAATTTCGCTACCTTAAGAACGTTATAGTTACGATCGCCGTTCACTGGGG 4181 >seq47232 Length=39093 Score = 73.4 bits (80), Expect = 8e-11 Identities = 45/48 (94%), Gaps = 0/48 (0%) Strand=Plus/Minus Query 305 AGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352 |||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct 25583 AGGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTA 25536 >seq42583 Length=31531 Score = 73.4 bits (80), Expect = 8e-11 Identities = 45/48 (94%), Gaps = 0/48 (0%) Strand=Plus/Plus Query 305 AGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352 |||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct 28072 AGGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTA 28119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1060019852160