Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687 525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq18959 141 1e-31 seq50471 116 6e-24 seq40580 116 6e-24 seq60104 113 7e-23 seq31343 78.8 1e-12 >seq18959 Length=580 Score = 141 bits (156), Expect = 1e-31 Identities = 152/195 (78%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | | ||||||||||||||||| ||||| |||||||||||||||||||| | Sbjct 386 ACTCGTTGAATACATCAGTGTAGCGCGCGTGGGGCCCGGAACATCTAAGGGCATCACATA 327 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGC--CAATAGTCCCTCTAAGAAGCCAG 119 | |||||||||||||||||| || |||| |||| | |||||||||||||||||| | Sbjct 326 CTTGTTATTGCCTCAAACTTTTAT-GGCTT-AAGCGGCCATAGTCCCTCTAAGAAGCTGG 269 Query 120 CC-ACCAACCATA-GTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAA 177 || || || || | | |||| | || | ||||||||||||||| || || Sbjct 268 CCGTGGAAGGTTACCTCCACATAGTTATTGACCAAACTGAGGTCTCGTTCGTTAGCGTAA 209 Query 178 TTAACCAGACAAATC 192 ||||| ||||||||| Sbjct 208 TTAACTAGACAAATC 194 Score = 123 bits (136), Expect = 4e-26 Identities = 99/116 (85%), Gaps = 4/116 (3%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | | ||||||||||||||||| ||||| |||||||||||||||||||| | Sbjct 114 ACTCGTTGAATACATCAGTGTAGCGCGCGTGGGGCCCGGAACATCTAAGGGCATCACATA 55 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGC--CAATAGTCCCTCTAAGAAG 115 | |||||||||||||||||| || |||| |||| | ||||||||||||||||| Sbjct 54 CTTGTTATTGCCTCAAACTTTTAT-GGCTT-AAGCGGCCATAGTCCCTCTAAGAAG 1 >seq50471 Length=14951 Score = 116 bits (128), Expect = 6e-24 Identities = 75/82 (91%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | | |||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct 2060 ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCATAACATCTAAGGACATCACAGA 2001 Query 62 CCTGTTATTGCCTCAAACTTCC 83 |||||||||||||||||||||| Sbjct 2000 CCTGTTATTGCCTCAAACTTCC 1979 >seq40580 Length=5286 Score = 116 bits (128), Expect = 6e-24 Identities = 75/82 (91%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | | |||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct 5161 ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCATAACATCTAAGGACATCACAGA 5220 Query 62 CCTGTTATTGCCTCAAACTTCC 83 |||||||||||||||||||||| Sbjct 5221 CCTGTTATTGCCTCAAACTTCC 5242 >seq60104 Length=6779 Score = 113 bits (124), Expect = 7e-23 Identities = 64/65 (98%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 179 TAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAA 238 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2883 TAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAA 2942 Query 239 GAAAG 243 ||||| Sbjct 2943 GAAAG 2947 >seq31343 Length=16520 Score = 78.8 bits (86), Expect = 1e-12 Identities = 80/103 (78%), Gaps = 1/103 (1%) Strand=Plus/Minus Query 141 GCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAA-TTAACCAGACAAATCACTCCAC 199 ||||||||||| ||||| || | ||| | | ||| ||||| ||| |||||||||||| Sbjct 9304 GCTATTTAGCAAGTTAAAATCCCCTTCACTTTGTGAAATTAACTAGATAAATCACTCCAC 9245 Query 200 CAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAA 242 ||| |||||| | ||| | |||||| ||| | ||| |||||| Sbjct 9244 CAATTAAGAATGACCACACGCCACCAACCAAATAATAAAGAAA 9202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795070673835