Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687 525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq16110 327 2e-87 seq43990 255 1e-65 seq67237 129 1e-27 seq19312 125 1e-26 >seq16110 Length=25130 Score = 327 bits (362), Expect = 2e-87 Identities = 243/283 (86%), Gaps = 1/283 (0%) Strand=Plus/Plus Query 11 AATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTA 70 |||||| |||| | | || || ||||||||| |||||||||||||||||| || ||| || Sbjct 4565 AATTACTATTGTGAC-ACTGTAATCAGTAGGTTAAAACTAACCTGTCTCACGATGGTTTA 4623 Query 71 AACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTC 130 |||||| |||||||||| |||| |||| |||| || ||||| ||| |||||||||||| Sbjct 4624 AACCCATCTCACGTTCCTTATTGGTGGATGAATAACCCAACACTTGATGAATTCTGCTTC 4683 Query 131 GGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGG 190 |||||||||| | |||| |||||||||| ||||| |||||||||||||| ||||||| Sbjct 4684 ACAATGATAGGAACAACCGATATCGAAGGATGAAAAACCAACGTCGCTATGACCGCTTGG 4743 Query 191 CTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGA 250 ||||||||||| |||||||| |||||||||||||||| ||||||||| ||||||| ||| Sbjct 4744 CTGCCACAAGCTAGTTATCCTTGTGGTAACTTTTCTGATACCTCTAGCTTCAAATTCCGA 4803 Query 251 GGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 |||||||||||| ||||||||||||||||| | || |||||| Sbjct 4804 AGGACTAAAGGATTGATAGGCCACACTTTCACGATTCGTATTC 4846 >seq43990 Length=10755 Score = 255 bits (282), Expect = 1e-65 Identities = 164/178 (92%), Gaps = 1/178 (1%) Strand=Plus/Minus Query 11 AATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTA 70 |||||| |||| | | || ||||||||||||||||||||||||||||||| ||||||||| Sbjct 6284 AATTACTATTGCGAC-ACTGTCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTA 6226 Query 71 AACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTC 130 |||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||| Sbjct 6225 AACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGAATTCTGCTTC 6166 Query 131 GGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTT 188 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6165 ACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTT 6108 >seq67237 Length=9663 Score = 129 bits (142), Expect = 1e-27 Identities = 82/89 (92%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 107 CCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAA 166 ||||| ||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 327 CCAACACTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAA 268 Query 167 AGCAACGTCGCTATGAACGCTTGGCTGCC 195 ||||||||||||||||||||||||||||| Sbjct 267 AGCAACGTCGCTATGAACGCTTGGCTGCC 239 >seq19312 Length=18172 Score = 125 bits (138), Expect = 1e-26 Identities = 74/77 (96%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 160 ATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAA 219 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7565 ATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAA 7624 Query 220 CTTTTCTGGCACCTCTA 236 |||||| |||||||| Sbjct 7625 CTTTTCCTTCACCTCTA 7641 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 852485844960