Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687 525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq164506 192 1e-46 >seq164506 Length=386 Score = 192 bits (212), Expect = 1e-46 Identities = 199/258 (77%), Gaps = 2/258 (1%) Strand=Plus/Minus Query 66 CCCTGTTGTATTGGATT-TCTAACCGGACGACGTATAACCGTTGACGGGACAGTGTCAGT 124 ||||| || ||| ||| ||| ||| || |||| | ||| | | |||| |||| | Sbjct 258 CCCTGATGGATTTGATCGTCTCACCTAGCGTCGTAAATCCGGCGCAGAGACAATGTCTGA 199 Query 125 CGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCC 184 |||||||||||||||||||||||||||||||| |||||||||||||| | ||| ||| | Sbjct 198 TGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAAAGTAACGGAGGCGCGCGAAGGTACAC 139 Query 185 TCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGTTTGACTGCGACAC 244 |||| | | ||||||||| || | || | || |||| ||| ||| || ||||||| || Sbjct 138 TCAGATAGCATGGAAACCTATCGTAGAGCGTAAGGGCATAAGTGTGCTTAACTGCGAGAC 79 Query 245 CCT-CAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACG 303 || |||||| ||||| |||||| || | || |||||||| ||| | |||||||| | Sbjct 78 TCTACAAGTCGAGCAGATGCGAAAGCAGGTCCTAGTGATCCGGTGGTTCCGAATGGAAGG 19 Query 304 GCCGTCGCTCGACGGATA 321 ||| |||||| ||||||| Sbjct 18 GCCATCGCTCAACGGATA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 980199080160