Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687 525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq20863 89.7 6e-16 seq31780 80.6 3e-13 >seq20863 Length=629 Score = 89.7 bits (98), Expect = 6e-16 Identities = 109/150 (73%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| || |||| || |||| ||||| || | | |||||| ||| Sbjct 554 GGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATTTTCACAGACATGTCTATTTCATCGAG 495 Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 || | | ||||||| ||| | ||||||| ||||| |||||||||| Sbjct 494 -TCTCTCTCCGAGACAGTGTCCAAATCGTTACGTCTTTCGTGCGGGTCGAAACTTACCCG 436 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||||||| Sbjct 435 ACAAGGAATTTCGCTACCTTAGGACCGTTA 406 >seq31780 Length=18751 Score = 80.6 bits (88), Expect = 3e-13 Identities = 92/128 (72%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 46 GGTAATCGGCATCTTCACCGATACTACAATTTCACTGAGCTCACGGTTGAGACAGNNNNN 105 |||| | |||||||||| | | | ||||||||||| | || | ||| || Sbjct 9781 GGTACTTCGCATCTTCACAAAGAATTCAATTTCACTGGGTCCATGTCAGAGGTAGCGGGG 9722 Query 106 NNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAG 165 ||||||||||||| |||||| ||||| |||||||||||||||| ||||||| Sbjct 9721 CAGTCGTTACACCATTCGTGTAGGTCGCTACTTATGCGACAAGGAATTTCGCCACCTTAG 9662 Query 166 GACCGTTA 173 ||| |||| Sbjct 9661 GACAGTTA 9654 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546012390465