Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= AAMG01001138.1
Length=202
Score E
Sequences producing significant alignments: (Bits) Value
seq20863 89.7 6e-16
seq31780 80.6 3e-13
>seq20863
Length=629
Score = 89.7 bits (98), Expect = 6e-16
Identities = 109/150 (73%), Gaps = 2/150 (1%)
Strand=Plus/Minus
Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84
|||||||| |||| || |||| || |||| ||||| || | | |||||| |||
Sbjct 554 GGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATTTTCACAGACATGTCTATTTCATCGAG 495
Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143
|| | | ||||||| ||| | ||||||| ||||| ||||||||||
Sbjct 494 -TCTCTCTCCGAGACAGTGTCCAAATCGTTACGTCTTTCGTGCGGGTCGAAACTTACCCG 436
Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173
||||||||||||||||||||||||||||||
Sbjct 435 ACAAGGAATTTCGCTACCTTAGGACCGTTA 406
>seq31780
Length=18751
Score = 80.6 bits (88), Expect = 3e-13
Identities = 92/128 (72%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 46 GGTAATCGGCATCTTCACCGATACTACAATTTCACTGAGCTCACGGTTGAGACAGNNNNN 105
|||| | |||||||||| | | | ||||||||||| | || | ||| ||
Sbjct 9781 GGTACTTCGCATCTTCACAAAGAATTCAATTTCACTGGGTCCATGTCAGAGGTAGCGGGG 9722
Query 106 NNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAG 165
||||||||||||| |||||| ||||| |||||||||||||||| |||||||
Sbjct 9721 CAGTCGTTACACCATTCGTGTAGGTCGCTACTTATGCGACAAGGAATTTCGCCACCTTAG 9662
Query 166 GACCGTTA 173
||| ||||
Sbjct 9661 GACAGTTA 9654
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 546012390465
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |