Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687 525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq77831 221 3e-55 seq47755 221 3e-55 seq56876 217 3e-54 seq65666 199 8e-49 seq23665 179 8e-43 seq20200 140 7e-31 seq34883 136 8e-30 seq78475 134 3e-29 seq47 120 6e-25 seq7626 113 1e-22 >seq77831 Length=5325 Score = 221 bits (244), Expect = 3e-55 Identities = 239/310 (77%), Gaps = 20/310 (6%) Strand=Plus/Plus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 |||||||||||| || |||||||||||||||||| || |||||||||||||||||| Sbjct 695 CACGCGGCATTG-CTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTC 753 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148 |||||||||||||| |||||||||||| |||||||| |||||||||||||| |||||| | Sbjct 754 CCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCT 813 Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGAC-CTAGGCTCA 207 || |||| |||||||||| ||| ||| ||||||||||||||||||| ||| | || | | Sbjct 814 ACTGATCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGACGCGAGCCCCT 873 Query 208 TCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTTTCTCCCGTAGGACGTATGCGGTATTAG 267 || || ||| || ||| |||| | | | | | || | |||||||| Sbjct 874 CCT-----CG---GGC-----GGATTCCTCCTTTTGCTCCTCAG-CCTACGGGGTATTAG 919 Query 268 CGTCCGTTTCCGAACGTTATCCCCCACTACCA--GGCAGATTCCTAGGCATTACTCACCC 325 | |||||||| ||| | ||| || ||| || || ||| || || |||||||||| Sbjct 920 CAGCCGTTTCCAGCTGTTGTTCCC--CTCCCAAGGGTAGGTTCTTACGCGTTACTCACCC 977 Query 326 GTCCGCCGCT 335 ||||||| || Sbjct 978 GTCCGCCACT 987 >seq47755 Length=5186 Score = 221 bits (244), Expect = 3e-55 Identities = 239/310 (77%), Gaps = 20/310 (6%) Strand=Plus/Minus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 |||||||||||| || |||||||||||||||||| || |||||||||||||||||| Sbjct 3603 CACGCGGCATTG-CTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTC 3545 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148 |||||||||||||| |||||||||||| |||||||| |||||||||||||| |||||| | Sbjct 3544 CCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCT 3485 Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGAC-CTAGGCTCA 207 || |||| |||||||||| ||| ||| ||||||||||||||||||| ||| | || | | Sbjct 3484 ACTGATCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGACGCGAGCCCCT 3425 Query 208 TCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTTTCTCCCGTAGGACGTATGCGGTATTAG 267 || || ||| || ||| |||| | | | | | || | |||||||| Sbjct 3424 CCT-----CG---GGC-----GGATTCCTCCTTTTGCTCCTCAG-CCTACGGGGTATTAG 3379 Query 268 CGTCCGTTTCCGAACGTTATCCCCCACTACCA--GGCAGATTCCTAGGCATTACTCACCC 325 | |||||||| ||| | ||| || ||| || || ||| || || |||||||||| Sbjct 3378 CAGCCGTTTCCAGCTGTTGTTCCC--CTCCCAAGGGTAGGTTCTTACGCGTTACTCACCC 3321 Query 326 GTCCGCCGCT 335 ||||||| || Sbjct 3320 GTCCGCCACT 3311 >seq56876 Length=5270 Score = 217 bits (240), Expect = 3e-54 Identities = 238/310 (77%), Gaps = 20/310 (6%) Strand=Plus/Minus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 |||||||||||| || |||||||||||||||||| || |||||||| ||||||||| Sbjct 4895 CACGCGGCATTG-CTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCATTGCTGCCTC 4837 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148 |||||||||||||| |||||||||||| |||||||| |||||||||||||| |||||| | Sbjct 4836 CCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCT 4777 Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGAC-CTAGGCTCA 207 || |||| |||||||||| ||| ||| ||||||||||||||||||| ||| | || | | Sbjct 4776 ACTGATCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGACGCGAGCCCCT 4717 Query 208 TCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTTTCTCCCGTAGGACGTATGCGGTATTAG 267 || || ||| || ||| |||| | | | | | || | |||||||| Sbjct 4716 CCT-----CG---GGC-----GGATTCCTCCTTTTGCTCCTCAG-CCTACGGGGTATTAG 4671 Query 268 CGTCCGTTTCCGAACGTTATCCCCCACTACCA--GGCAGATTCCTAGGCATTACTCACCC 325 | |||||||| ||| | ||| || ||| || || ||| || || |||||||||| Sbjct 4670 CAGCCGTTTCCAGCTGTTGTTCCC--CTCCCAAGGGTAGGTTCTTACGCGTTACTCACCC 4613 Query 326 GTCCGCCGCT 335 ||||||| || Sbjct 4612 GTCCGCCACT 4603 >seq65666 Length=4916 Score = 199 bits (220), Expect = 8e-49 Identities = 147/170 (86%), Gaps = 1/170 (1%) Strand=Plus/Minus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 |||||| ||||| || |||||||||||||||||| || |||||||||||||||||| Sbjct 3012 CACGCGACATTG-CTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTC 2954 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148 |||||||||||||| ||||||||||| |||||||| |||||||||||||| ||||| | Sbjct 2953 CCGTAGGAGTCTGGGTCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGAACCAGCT 2894 Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGAC 198 || |||| |||||||||| ||| ||| | ||||||||||||||||| ||| Sbjct 2893 ACTGATCATCGCCTTGGTAAGCTATTGCTTCACCAACTAGCTAATCAGAC 2844 >seq23665 Length=469 Score = 179 bits (198), Expect = 8e-43 Identities = 130/149 (87%), Gaps = 1/149 (1%) Strand=Plus/Plus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 |||||||||||| || ||||||||||| |||||| || |||||||||||||||||| Sbjct 87 CACGCGGCATTG-CTCCGTCAGGCTTTCGTCCATTGCGGAAAATTCCCCACTGCTGCCTC 145 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148 |||||||||||||| |||||||||||| |||||||| |||||||||||||| |||||| | Sbjct 146 CCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCT 205 Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACC 177 || |||| |||||||||| ||| ||| || Sbjct 206 ACTGATCATCGCCTTGGTAAGCTATTGCC 234 >seq20200 Length=18404 Score = 140 bits (154), Expect = 7e-31 Identities = 132/167 (79%), Gaps = 1/167 (1%) Strand=Plus/Minus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 |||| |||||| || | |||||||||||||||| || |||||| ||| |||||| Sbjct 263 CACGTGGCATTA-CTCCGTTAGGCTTTCGCCCATTGCGGAAAATTCCCTACTATTGCCTC 205 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148 | || ||||||| ||||||||| | |||||||| ||||||| |||||| |||| || Sbjct 204 CTATACAAGTCTGGGTCGTGTCTCAATCCCAGTGTGGTTGATCATTCTCTCATACCAATT 145 Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCC 195 || ||| |||||||||| ||| ||||||||| ||||||| ||| || Sbjct 144 ACTAATCATCGCCTTGGTAAGCTATTACCTCATCAACTAGTTAAACC 98 >seq34883 Length=18173 Score = 136 bits (150), Expect = 8e-30 Identities = 90/100 (90%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 87 TCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAG 146 |||||||||||||||| |||||||||||| |||||||| |||||||||||||| |||||| Sbjct 8280 TCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAG 8221 Query 147 TTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACT 186 ||| |||| |||||||||| ||| ||| ||||||||||| Sbjct 8220 CTACTGATCATCGCCTTGGTAAGCTATTGCCTCACCAACT 8181 >seq78475 Length=2463 Score = 134 bits (148), Expect = 3e-29 Identities = 134/170 (79%), Gaps = 3/170 (2%) Strand=Plus/Plus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 |||||| ||||| | | ||| |||||| |||||| || |||||||||| || |||| Sbjct 960 CACGCGACATTGCTTCG-TCAAGCTTTCACCCATTTCAAAAAATTCCCCACTACTACCTC 1018 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148 ||||||||| ||||||||||| | |||||||||||||||||||| |||| || | Sbjct 1019 TTATAGGAGTCTAAGTCGTGTCTCAGT-CTAGTGTGACTGATCATCCTCTTAGACTAGCT 1077 Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGAC 198 || |||| || | || || ||| ||| |||||||||||||||||| ||| Sbjct 1078 ACTGATCATCACATTTGTAAGCTATT-GCTCACCAACTAGCTAATCAGAC 1126 Score = 98.7 bits (108), Expect = 2e-18 Identities = 101/131 (77%), Gaps = 1/131 (1%) Strand=Plus/Minus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 |||| | ||||| || || |||||| ||||||||| || |||| ||||| || |||| Sbjct 831 CACGTGACATTG-CTCTATTGGGCTTTGGCCCATTGTGGAAAATTCTCCACTACTACCTC 773 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148 || ||||||||||| | ||||||| | |||||| ||||||||||||| ||||| | Sbjct 772 CCATAGGAGTCTGGGACACATCTCAGTCCGAGTGTGGTTGATCATCCTCTCGGACCAACT 713 Query 149 ACGGATCGTCG 159 | |||| ||| Sbjct 712 ATTGATCATCG 702 >seq47 Length=16403 Score = 120 bits (132), Expect = 6e-25 Identities = 83/93 (89%), Gaps = 1/93 (1%) Strand=Plus/Minus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 |||||||||||| || |||||||||||||||||| || |||||||||||||||||| Sbjct 1424 CACGCGGCATTG-CTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTC 1366 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGT 121 |||||||||||||| |||||||||||| ||||| Sbjct 1365 CCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGT 1333 >seq7626 Length=5844 Score = 113 bits (124), Expect = 1e-22 Identities = 100/124 (81%), Gaps = 1/124 (1%) Strand=Plus/Plus Query 32 GCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCG 91 ||| ||||| || ||||||||| || ||||| || |||| |||||||||||||||| Sbjct 435 GCGACATTG-CTCCGTCAGGCTTTAGCTCATTGCGAAAAATTCTCCACTGCTGCCTCCCG 493 Query 92 TAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACG 151 || |||||| | | |||||||||| | |||||| |||||||||||||| |||| ||| Sbjct 494 TACGAGTCTAGGCTGTGTCTCAGTCCTAGTGTGGCTGATCATCCTCTCGAACCAACTACT 553 Query 152 GATC 155 |||| Sbjct 554 GATC 557 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1069598344800