Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687 525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq24561 181 4e-43 seq38623 159 1e-36 seq77755 118 4e-24 seq39764 109 2e-21 seq9368 109 2e-21 seq64933 105 2e-20 seq62464 105 2e-20 seq29069 98.7 4e-18 seq9467 87.8 7e-15 >seq24561 Length=945 Score = 181 bits (200), Expect = 4e-43 Identities = 137/159 (86%), Gaps = 2/159 (1%) Strand=Plus/Plus Query 1 TCGACTACGGAGCTTAATCCCCCGCAGTCTCACAGCCGCGCTCTCACTTCCCGGCATTCG 60 ||||| | | |||||| |||||| ||||||||| || ||||||| |||| |||||||||| Sbjct 788 TCGACGATGAAGCTTA-TCCCCCACAGTCTCACTGCTGCGCTCTGACTTACCGGCATTCG 846 Query 61 GAGTTTGGTTGATTTCGGTAAGCTTGTGGGCCCCCTAGACCATCCAGT-GCTCTACCTCC 119 |||||||| ||| || |||| ||||| || ||| | | ||||||||| ||||||||||| Sbjct 847 GAGTTTGGCTGACGTCAGTAACCTTGTAGGGCCCATCGGCCATCCAGTAGCTCTACCTCC 906 Query 120 GGGAAGAAACACGCGACGCTGCACCTAAATGCATTTCGG 158 || ||||||||||| |||||||||||||||||||||||| Sbjct 907 GGCAAGAAACACGCAACGCTGCACCTAAATGCATTTCGG 945 >seq38623 Length=4117 Score = 159 bits (176), Expect = 1e-36 Identities = 351/515 (68%), Gaps = 36/515 (7%) Strand=Plus/Minus Query 88 GGGCC-CCCTAGACCATCCAGTGCTCTACCTCCGGGAAGAAACACGCGACGCTGCACCTA 146 ||||| |||||| |||| ||||||||||||| || | ||| ||||| || | Sbjct 1289 GGGCCACCCTAGCCCATTGAGTGCTCTACCTCGGGCCATCGACATCATACGCTCTACTGA 1230 Query 147 AATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCAC 206 ||| |||||| ||| ||||||||||| | | ||| ||||||||||||||||| |||| Sbjct 1229 AATAGATTTCGCGGAAAACCAGCTATCTCCGATCTTGGTTGGCCTTTCACCCCTAGCCAC 1170 Query 207 AGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTA-CCCGC 265 | ||||||||| | ||| | || || ||||||||||||||||| | | ||| | | Sbjct 1169 AAGTCATCCCCGTATTTTGCCACATACGTGGGTTCGGTCCTCCAAGGCCTGTTAGAGCTC 1110 Query 266 GCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTCTTGATCGTGCCACTCATACG 325 ||||||||||| ||||| |||||| | | |||||||| || | | | | | Sbjct 1109 TCTTCAACCTGCTCATGGCTAGATCGATCGGTTTCGGGTC-AAATAGGAAGAACTAGAAG 1051 Query 326 CCCTATTCGGACTCGCTTTCGCTACGGCTACCCCACACGGGTTAACCTCGCGACACAACG 385 |||| ||| | || |||| || | || |||| | ||| | | Sbjct 1050 ----ATTCCACCTC---TGAAAGGCGCCTACACCTAATGGCTTAAGC-CGCTGTTC-CCA 1000 Query 386 CAAACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCA-CCTG-GTAC------CTA--- 434 ||||| | | ||| | ||||||| ||||||| | || || | ||| Sbjct 999 TTTTCTCGCTGACCCATCATGCAAAAGGTACGCCGTTAGAGTGAGTGCGCTTTACTAAAT 940 Query 435 -------AAAGGCACTTCAGCTC---CGACGGATTGTAGGCACATGGTTTCAGGT--ACT 482 |||||| | | ||||| |||| |||||| ||| | | |||||| || Sbjct 939 CTCAAGTAAAGGCTC-TAAGCTCCTTCGACTGATTGTTCGCATCGGATCTCAGGTTCTCT 881 Query 483 ATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGG 542 ||| ||||||| |||| |||||||||||||||||||||||||||| ||||||||| Sbjct 880 ATTGCACTCCCTAAATAGGGTTCTTTTCACCTTTCCCTCACGGTACTTGTACGCTATCGG 821 Query 543 TCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCC 577 ||| |||| || ||||||||| |||||||||| Sbjct 820 TCATTGAGGAATACTTAGGCTTAGAGGGTGGTCCC 786 >seq77755 Length=5325 Score = 118 bits (130), Expect = 4e-24 Identities = 144/192 (75%), Gaps = 11/192 (6%) Strand=Plus/Minus Query 391 TCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGTAC---CTAAAAGGCACTT--- 444 |||| |||||||||||||| |||||||| |||| | || || | || ||| Sbjct 3201 TCGCCGGCTCATTCTTCAACAGGCACGCGGTCAGA-GTCACGGGCTTA---GC-CTTAGC 3147 Query 445 CAGCTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCACTCCCCGCCAGGGGTA 504 | |||| || | ||| || | ||||||| || ||||||||||||||| ||||| Sbjct 3146 CTCCTCCCACTGCTTGGGAGCTTACGGTTTCATGTTCTATTTCACTCCCCGATGGGGGTT 3087 Query 505 CTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTT 564 ||||||||| ||||||||||||||| | | |||||||||||| || ||||||||| ||| Sbjct 3086 CTTTTCACCCTTCCCTCACGGTACTACTTCACTATCGGTCACCCAGTAGTATTTAGCCTT 3027 Query 565 AACGGGTGGTCC 576 |||||||| Sbjct 3026 GCAAGGTGGTCC 3015 >seq39764 Length=5682 Score = 109 bits (120), Expect = 2e-21 Identities = 93/115 (81%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 137 GCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCAC 196 ||||| ||| || |||||||||||||||||||||| | | ||| || |||| |||||| Sbjct 1617 GCTGCGCCTCAACGCATTTCGGGGAGAACCAGCTAGCTCTGGGTTCGAGTGGCATTTCAC 1676 Query 197 CCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCAC 251 ||||| ||||| |||||| || | | |||||| | ||| ||||||| ||||||| Sbjct 1677 CCCTAACCACAACTCATCCGCTGATTCTTCAACATCAGTCGGTTCGGACCTCCAC 1731 >seq9368 Length=5193 Score = 109 bits (120), Expect = 2e-21 Identities = 93/115 (81%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 137 GCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCAC 196 ||||| ||| || |||||||||||||||||||||| | | ||| || |||| |||||| Sbjct 4354 GCTGCGCCTCAACGCATTTCGGGGAGAACCAGCTAGCTCTGGGTTCGAGTGGCATTTCAC 4295 Query 197 CCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCAC 251 ||||| ||||| |||||| || | | |||||| | ||| ||||||| ||||||| Sbjct 4294 CCCTAACCACAACTCATCCGCTGATTCTTCAACATCAGTCGGTTCGGACCTCCAC 4240 >seq64933 Length=3750 Score = 105 bits (116), Expect = 2e-20 Identities = 93/116 (80%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 484 TTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGT 543 ||||| |||||| ||||| ||||||||| ||||||||||||||| | | |||||||| Sbjct 569 TTTCAATCCCCGATGGGGGTTCTTTTCACCCTTCCCTCACGGTACTACTTCACTATCGGT 628 Query 544 CACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACACGAAATTTCA 599 |||| |||||||||||| ||| |||||||| | |||||||||| ||| || Sbjct 629 CACCCAGGAGTATTTAGCCTTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCA 684 >seq62464 Length=4263 Score = 105 bits (116), Expect = 2e-20 Identities = 154/215 (72%), Gaps = 7/215 (3%) Strand=Plus/Minus Query 137 GCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCAC 196 || || ||| || ||||||||||||||||| ||| | | ||| || |||| |||||| Sbjct 559 GCGGCGCCTCAACACATTTCGGGGAGAACCATCTAGCTCTGGGTTCGAGTGGCATTTCAC 500 Query 197 CCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGT 256 | ||| ||||| |||| | | | | |||||| | ||| ||||||| ||||||| || Sbjct 499 CTCTAACCACAACTCAT-CGTTGATTCTTCAACATCAGTCGGTTCGGACCTCCACTTAGT 441 Query 257 CTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTC--TTGATCGTG 314 | |||| |||||| ||| |||||| ||||||| | |||| ||| | | ||| Sbjct 440 TTCACCCAAGCTTCATCCTAGTCATGGACAGATCACCCAGGTTCGAGTCCATAAGTAGTG 381 Query 315 CCACTCATACGCCCTATTCGGACTCGCTTTCGCTA 349 || | ||||||| ||||||||||||||| Sbjct 380 ACAAT----TGCCCTATGAAGACTCGCTTTCGCTA 350 >seq29069 Length=4843 Score = 98.7 bits (108), Expect = 4e-18 Identities = 121/161 (75%), Gaps = 11/161 (7%) Strand=Plus/Minus Query 391 TCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGTAC---CTAAAAGGCACTT--- 444 |||| |||||||||||||| |||||||| |||| | || || | || ||| Sbjct 357 TCGCCGGCTCATTCTTCAACAGGCACGCGGTCAGA-GTCACGGGCTTA---GC-CTTAGC 303 Query 445 CAGCTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCACTCCCCGCCAGGGGTA 504 | |||| || | |||| || | ||||||| || ||||||||||||||| ||||| Sbjct 302 CTCCTCCCACTGCTTGTGAGCTTACGGTTTCATGTTCTATTTCACTCCCCGATGGGGGTT 243 Query 505 CTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCA 545 ||||||||| ||||||||||||||| | | |||||||||| Sbjct 242 CTTTTCACCCTTCCCTCACGGTACTACTTCACTATCGGTCA 202 >seq9467 Length=6168 Score = 87.8 bits (96), Expect = 7e-15 Identities = 75/93 (81%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 137 GCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCAC 196 ||||| ||| || |||||||||||||||||||||| | | ||| || |||| |||||| Sbjct 453 GCTGCGCCTCAACGCATTTCGGGGAGAACCAGCTAGCTCTGGGTTCGAGTGGCATTTCAC 512 Query 197 CCCTATCCACAGGTCATCCCCTCAGTTTTCAAC 229 ||||| ||||| |||||| || | | |||||| Sbjct 513 CCCTAACCACAACTCATCCGCTGATTCTTCAAC 545 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1813527939840