Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= AAMG01001213.1
Length=600
Score E
Sequences producing significant alignments: (Bits) Value
seq24561 181 4e-43
seq38623 159 1e-36
seq77755 118 4e-24
seq39764 109 2e-21
seq9368 109 2e-21
seq64933 105 2e-20
seq62464 105 2e-20
seq29069 98.7 4e-18
seq9467 87.8 7e-15
>seq24561
Length=945
Score = 181 bits (200), Expect = 4e-43
Identities = 137/159 (86%), Gaps = 2/159 (1%)
Strand=Plus/Plus
Query 1 TCGACTACGGAGCTTAATCCCCCGCAGTCTCACAGCCGCGCTCTCACTTCCCGGCATTCG 60
||||| | | |||||| |||||| ||||||||| || ||||||| |||| ||||||||||
Sbjct 788 TCGACGATGAAGCTTA-TCCCCCACAGTCTCACTGCTGCGCTCTGACTTACCGGCATTCG 846
Query 61 GAGTTTGGTTGATTTCGGTAAGCTTGTGGGCCCCCTAGACCATCCAGT-GCTCTACCTCC 119
|||||||| ||| || |||| ||||| || ||| | | ||||||||| |||||||||||
Sbjct 847 GAGTTTGGCTGACGTCAGTAACCTTGTAGGGCCCATCGGCCATCCAGTAGCTCTACCTCC 906
Query 120 GGGAAGAAACACGCGACGCTGCACCTAAATGCATTTCGG 158
|| ||||||||||| ||||||||||||||||||||||||
Sbjct 907 GGCAAGAAACACGCAACGCTGCACCTAAATGCATTTCGG 945
>seq38623
Length=4117
Score = 159 bits (176), Expect = 1e-36
Identities = 351/515 (68%), Gaps = 36/515 (7%)
Strand=Plus/Minus
Query 88 GGGCC-CCCTAGACCATCCAGTGCTCTACCTCCGGGAAGAAACACGCGACGCTGCACCTA 146
||||| |||||| |||| ||||||||||||| || | ||| ||||| || |
Sbjct 1289 GGGCCACCCTAGCCCATTGAGTGCTCTACCTCGGGCCATCGACATCATACGCTCTACTGA 1230
Query 147 AATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCAC 206
||| |||||| ||| ||||||||||| | | ||| ||||||||||||||||| ||||
Sbjct 1229 AATAGATTTCGCGGAAAACCAGCTATCTCCGATCTTGGTTGGCCTTTCACCCCTAGCCAC 1170
Query 207 AGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTA-CCCGC 265
| ||||||||| | ||| | || || ||||||||||||||||| | | ||| | |
Sbjct 1169 AAGTCATCCCCGTATTTTGCCACATACGTGGGTTCGGTCCTCCAAGGCCTGTTAGAGCTC 1110
Query 266 GCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTCTTGATCGTGCCACTCATACG 325
||||||||||| ||||| |||||| | | |||||||| || | | | | |
Sbjct 1109 TCTTCAACCTGCTCATGGCTAGATCGATCGGTTTCGGGTC-AAATAGGAAGAACTAGAAG 1051
Query 326 CCCTATTCGGACTCGCTTTCGCTACGGCTACCCCACACGGGTTAACCTCGCGACACAACG 385
|||| ||| | || |||| || | || |||| | ||| | |
Sbjct 1050 ----ATTCCACCTC---TGAAAGGCGCCTACACCTAATGGCTTAAGC-CGCTGTTC-CCA 1000
Query 386 CAAACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCA-CCTG-GTAC------CTA--- 434
||||| | | ||| | ||||||| ||||||| | || || | |||
Sbjct 999 TTTTCTCGCTGACCCATCATGCAAAAGGTACGCCGTTAGAGTGAGTGCGCTTTACTAAAT 940
Query 435 -------AAAGGCACTTCAGCTC---CGACGGATTGTAGGCACATGGTTTCAGGT--ACT 482
|||||| | | ||||| |||| |||||| ||| | | |||||| ||
Sbjct 939 CTCAAGTAAAGGCTC-TAAGCTCCTTCGACTGATTGTTCGCATCGGATCTCAGGTTCTCT 881
Query 483 ATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGG 542
||| ||||||| |||| |||||||||||||||||||||||||||| |||||||||
Sbjct 880 ATTGCACTCCCTAAATAGGGTTCTTTTCACCTTTCCCTCACGGTACTTGTACGCTATCGG 821
Query 543 TCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCC 577
||| |||| || ||||||||| ||||||||||
Sbjct 820 TCATTGAGGAATACTTAGGCTTAGAGGGTGGTCCC 786
>seq77755
Length=5325
Score = 118 bits (130), Expect = 4e-24
Identities = 144/192 (75%), Gaps = 11/192 (6%)
Strand=Plus/Minus
Query 391 TCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGTAC---CTAAAAGGCACTT--- 444
|||| |||||||||||||| |||||||| |||| | || || | || |||
Sbjct 3201 TCGCCGGCTCATTCTTCAACAGGCACGCGGTCAGA-GTCACGGGCTTA---GC-CTTAGC 3147
Query 445 CAGCTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCACTCCCCGCCAGGGGTA 504
| |||| || | ||| || | ||||||| || ||||||||||||||| |||||
Sbjct 3146 CTCCTCCCACTGCTTGGGAGCTTACGGTTTCATGTTCTATTTCACTCCCCGATGGGGGTT 3087
Query 505 CTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTT 564
||||||||| ||||||||||||||| | | |||||||||||| || ||||||||| |||
Sbjct 3086 CTTTTCACCCTTCCCTCACGGTACTACTTCACTATCGGTCACCCAGTAGTATTTAGCCTT 3027
Query 565 AACGGGTGGTCC 576
||||||||
Sbjct 3026 GCAAGGTGGTCC 3015
>seq39764
Length=5682
Score = 109 bits (120), Expect = 2e-21
Identities = 93/115 (81%), Gaps = 0/115 (0%)
Strand=Plus/Plus
Query 137 GCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCAC 196
||||| ||| || |||||||||||||||||||||| | | ||| || |||| ||||||
Sbjct 1617 GCTGCGCCTCAACGCATTTCGGGGAGAACCAGCTAGCTCTGGGTTCGAGTGGCATTTCAC 1676
Query 197 CCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCAC 251
||||| ||||| |||||| || | | |||||| | ||| ||||||| |||||||
Sbjct 1677 CCCTAACCACAACTCATCCGCTGATTCTTCAACATCAGTCGGTTCGGACCTCCAC 1731
>seq9368
Length=5193
Score = 109 bits (120), Expect = 2e-21
Identities = 93/115 (81%), Gaps = 0/115 (0%)
Strand=Plus/Minus
Query 137 GCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCAC 196
||||| ||| || |||||||||||||||||||||| | | ||| || |||| ||||||
Sbjct 4354 GCTGCGCCTCAACGCATTTCGGGGAGAACCAGCTAGCTCTGGGTTCGAGTGGCATTTCAC 4295
Query 197 CCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCAC 251
||||| ||||| |||||| || | | |||||| | ||| ||||||| |||||||
Sbjct 4294 CCCTAACCACAACTCATCCGCTGATTCTTCAACATCAGTCGGTTCGGACCTCCAC 4240
>seq64933
Length=3750
Score = 105 bits (116), Expect = 2e-20
Identities = 93/116 (80%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 484 TTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGT 543
||||| |||||| ||||| ||||||||| ||||||||||||||| | | ||||||||
Sbjct 569 TTTCAATCCCCGATGGGGGTTCTTTTCACCCTTCCCTCACGGTACTACTTCACTATCGGT 628
Query 544 CACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACACGAAATTTCA 599
|||| |||||||||||| ||| |||||||| | |||||||||| ||| ||
Sbjct 629 CACCCAGGAGTATTTAGCCTTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCA 684
>seq62464
Length=4263
Score = 105 bits (116), Expect = 2e-20
Identities = 154/215 (72%), Gaps = 7/215 (3%)
Strand=Plus/Minus
Query 137 GCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCAC 196
|| || ||| || ||||||||||||||||| ||| | | ||| || |||| ||||||
Sbjct 559 GCGGCGCCTCAACACATTTCGGGGAGAACCATCTAGCTCTGGGTTCGAGTGGCATTTCAC 500
Query 197 CCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGT 256
| ||| ||||| |||| | | | | |||||| | ||| ||||||| ||||||| ||
Sbjct 499 CTCTAACCACAACTCAT-CGTTGATTCTTCAACATCAGTCGGTTCGGACCTCCACTTAGT 441
Query 257 CTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTC--TTGATCGTG 314
| |||| |||||| ||| |||||| ||||||| | |||| ||| | | |||
Sbjct 440 TTCACCCAAGCTTCATCCTAGTCATGGACAGATCACCCAGGTTCGAGTCCATAAGTAGTG 381
Query 315 CCACTCATACGCCCTATTCGGACTCGCTTTCGCTA 349
|| | ||||||| |||||||||||||||
Sbjct 380 ACAAT----TGCCCTATGAAGACTCGCTTTCGCTA 350
>seq29069
Length=4843
Score = 98.7 bits (108), Expect = 4e-18
Identities = 121/161 (75%), Gaps = 11/161 (7%)
Strand=Plus/Minus
Query 391 TCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGTAC---CTAAAAGGCACTT--- 444
|||| |||||||||||||| |||||||| |||| | || || | || |||
Sbjct 357 TCGCCGGCTCATTCTTCAACAGGCACGCGGTCAGA-GTCACGGGCTTA---GC-CTTAGC 303
Query 445 CAGCTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCACTCCCCGCCAGGGGTA 504
| |||| || | |||| || | ||||||| || ||||||||||||||| |||||
Sbjct 302 CTCCTCCCACTGCTTGTGAGCTTACGGTTTCATGTTCTATTTCACTCCCCGATGGGGGTT 243
Query 505 CTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCA 545
||||||||| ||||||||||||||| | | ||||||||||
Sbjct 242 CTTTTCACCCTTCCCTCACGGTACTACTTCACTATCGGTCA 202
>seq9467
Length=6168
Score = 87.8 bits (96), Expect = 7e-15
Identities = 75/93 (81%), Gaps = 0/93 (0%)
Strand=Plus/Plus
Query 137 GCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCAC 196
||||| ||| || |||||||||||||||||||||| | | ||| || |||| ||||||
Sbjct 453 GCTGCGCCTCAACGCATTTCGGGGAGAACCAGCTAGCTCTGGGTTCGAGTGGCATTTCAC 512
Query 197 CCCTATCCACAGGTCATCCCCTCAGTTTTCAAC 229
||||| ||||| |||||| || | | ||||||
Sbjct 513 CCCTAACCACAACTCATCCGCTGATTCTTCAAC 545
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1813527939840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |