Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= AAMG01001291.1
Length=420
Score E
Sequences producing significant alignments: (Bits) Value
seq77755 150 4e-34
seq29069 132 1e-28
seq64933 109 1e-21
seq38623 102 2e-19
seq87307 75.2 3e-11
seq39499 75.2 3e-11
seq14869 75.2 3e-11
>seq77755
Length=5325
Score = 150 bits (166), Expect = 4e-34
Identities = 112/130 (86%), Gaps = 1/130 (1%)
Strand=Plus/Minus
Query 250 CTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCT 309
||||||||||||| || |||||||||| | ||||||||||||||| | ||||||||
Sbjct 3143 CTCCCACTGCTTGGGAGCTTACGGTTTCATGTTCTATTTCACTCCCCGATG-GGGGTTCT 3085
Query 310 TTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGG 369
|||| || |||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct 3084 TTTCACCCTTCCCTCACGGTACTACTTCACTATCGGTCACCCAGTAGTATTTAGCCTTGC 3025
Query 370 AGGATGGTCC 379
| | ||||||
Sbjct 3024 AAGGTGGTCC 3015
>seq29069
Length=4843
Score = 132 bits (146), Expect = 1e-28
Identities = 174/234 (74%), Gaps = 18/234 (8%)
Strand=Plus/Minus
Query 137 GCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTA--TTCGGTTAAGCTTTGCCACTG 194
|||||| |||||||||||| ||||| | |||| | ||| |||| | |||||||
Sbjct 423 GCCCTATGAAGACTCGCTTT-CGCTATGGCTCCGGTGGTTTCCCTTAACCAA-GCCACTG 366
Query 195 AAAATAAGTCGCTGACCCATTATACAAAAGGTACGC------AGTCAC---CCAA--CAA 243
|| |||||| | | |||| | ||| ||| |||| |||||| | | |
Sbjct 365 CCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCAGAGTCACGGGCTTAGCCTT 306
Query 244 AGTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGG 303
|| |||||||||||||| || |||||||||| | ||||||||||||||| | ||
Sbjct 305 AGCCTCCTCCCACTGCTTGTGAGCTTACGGTTTCATGTTCTATTTCACTCCCCGATG-GG 247
Query 304 GGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGT 357
|||||||||| || |||||||||||||||| |||||||||||||||| |||||
Sbjct 246 GGTTCTTTTCACCCTTCCCTCACGGTACTACTTCACTATCGGTCAGT--GTAGT 195
>seq64933
Length=3750
Score = 109 bits (120), Expect = 1e-21
Identities = 106/135 (79%), Gaps = 1/135 (1%)
Strand=Plus/Plus
Query 286 TTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGG 345
||||| ||||| | |||||||||||| || |||||||||||||||| |||||||||||
Sbjct 569 TTTCAATCCCCGATG-GGGGTTCTTTTCACCCTTCCCTCACGGTACTACTTCACTATCGG 627
Query 346 TCAGTCAGTAGTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGT 405
||| ||| |||||||||||||| | | |||||| | ||||| || || | |||
Sbjct 628 TCACCCAGGAGTATTTAGCCTTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCACGT 687
Query 406 GCTCCGTCCTACTCG 420
|| || | |||||||
Sbjct 688 GCCCCATGCTACTCG 702
>seq38623
Length=4117
Score = 102 bits (112), Expect = 2e-19
Identities = 102/130 (78%), Gaps = 3/130 (2%)
Strand=Plus/Minus
Query 255 ACTGCTTGTACGCATACGGTTTCAGGATCT--ATTTCACTCCCCTCTCCGGGGTTCTTTT 312
|||| |||| ||||| | | ||||| ||| ||| ||||||| | ||||||||||
Sbjct 912 ACTGATTGTTCGCATCGGATCTCAGGTTCTCTATTGCACTCCC-TAAATAGGGTTCTTTT 854
Query 313 CGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGG 372
| |||||||||||||||||| || | |||||||||| | || | || |||| ||| ||||
Sbjct 853 CACCTTTCCCTCACGGTACTTGTACGCTATCGGTCATTGAGGAATACTTAGGCTTAGAGG 794
Query 373 ATGGTCCCCC 382
|||||||||
Sbjct 793 GTGGTCCCCC 784
>seq87307
Length=6807
Score = 75.2 bits (82), Expect = 3e-11
Identities = 56/66 (85%), Gaps = 0/66 (0%)
Strand=Plus/Plus
Query 305 GTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGC 364
|| |||||| ||||||||| ||||||| |||| ||||||||| ||| ||||||||||
Sbjct 2787 GTCCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCTCACCAGTATTTAGC 2846
Query 365 CTTGGA 370
||||||
Sbjct 2847 CTTGGA 2852
>seq39499
Length=5887
Score = 75.2 bits (82), Expect = 3e-11
Identities = 56/66 (85%), Gaps = 0/66 (0%)
Strand=Plus/Minus
Query 305 GTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGC 364
|| |||||| ||||||||| ||||||| |||| ||||||||| ||| ||||||||||
Sbjct 5589 GTCCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCTCACCAGTATTTAGC 5530
Query 365 CTTGGA 370
||||||
Sbjct 5529 CTTGGA 5524
>seq14869
Length=26102
Score = 75.2 bits (82), Expect = 3e-11
Identities = 56/66 (85%), Gaps = 0/66 (0%)
Strand=Plus/Plus
Query 305 GTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGC 364
|| |||||| ||||||||| ||||||| |||| ||||||||| ||| ||||||||||
Sbjct 23348 GTCCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCTCACCAGTATTTAGC 23407
Query 365 CTTGGA 370
||||||
Sbjct 23408 CTTGGA 23413
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1238818381440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |