Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687 525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq77755 150 4e-34 seq29069 132 1e-28 seq64933 109 1e-21 seq38623 102 2e-19 seq87307 75.2 3e-11 seq39499 75.2 3e-11 seq14869 75.2 3e-11 >seq77755 Length=5325 Score = 150 bits (166), Expect = 4e-34 Identities = 112/130 (86%), Gaps = 1/130 (1%) Strand=Plus/Minus Query 250 CTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCT 309 ||||||||||||| || |||||||||| | ||||||||||||||| | |||||||| Sbjct 3143 CTCCCACTGCTTGGGAGCTTACGGTTTCATGTTCTATTTCACTCCCCGATG-GGGGTTCT 3085 Query 310 TTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGG 369 |||| || |||||||||||||||| |||||||||||||| |||||||||||||||||| Sbjct 3084 TTTCACCCTTCCCTCACGGTACTACTTCACTATCGGTCACCCAGTAGTATTTAGCCTTGC 3025 Query 370 AGGATGGTCC 379 | | |||||| Sbjct 3024 AAGGTGGTCC 3015 >seq29069 Length=4843 Score = 132 bits (146), Expect = 1e-28 Identities = 174/234 (74%), Gaps = 18/234 (8%) Strand=Plus/Minus Query 137 GCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTA--TTCGGTTAAGCTTTGCCACTG 194 |||||| |||||||||||| ||||| | |||| | ||| |||| | ||||||| Sbjct 423 GCCCTATGAAGACTCGCTTT-CGCTATGGCTCCGGTGGTTTCCCTTAACCAA-GCCACTG 366 Query 195 AAAATAAGTCGCTGACCCATTATACAAAAGGTACGC------AGTCAC---CCAA--CAA 243 || |||||| | | |||| | ||| ||| |||| |||||| | | | Sbjct 365 CCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCAGAGTCACGGGCTTAGCCTT 306 Query 244 AGTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGG 303 || |||||||||||||| || |||||||||| | ||||||||||||||| | || Sbjct 305 AGCCTCCTCCCACTGCTTGTGAGCTTACGGTTTCATGTTCTATTTCACTCCCCGATG-GG 247 Query 304 GGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGT 357 |||||||||| || |||||||||||||||| |||||||||||||||| ||||| Sbjct 246 GGTTCTTTTCACCCTTCCCTCACGGTACTACTTCACTATCGGTCAGT--GTAGT 195 >seq64933 Length=3750 Score = 109 bits (120), Expect = 1e-21 Identities = 106/135 (79%), Gaps = 1/135 (1%) Strand=Plus/Plus Query 286 TTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGG 345 ||||| ||||| | |||||||||||| || |||||||||||||||| ||||||||||| Sbjct 569 TTTCAATCCCCGATG-GGGGTTCTTTTCACCCTTCCCTCACGGTACTACTTCACTATCGG 627 Query 346 TCAGTCAGTAGTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGT 405 ||| ||| |||||||||||||| | | |||||| | ||||| || || | ||| Sbjct 628 TCACCCAGGAGTATTTAGCCTTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCACGT 687 Query 406 GCTCCGTCCTACTCG 420 || || | ||||||| Sbjct 688 GCCCCATGCTACTCG 702 >seq38623 Length=4117 Score = 102 bits (112), Expect = 2e-19 Identities = 102/130 (78%), Gaps = 3/130 (2%) Strand=Plus/Minus Query 255 ACTGCTTGTACGCATACGGTTTCAGGATCT--ATTTCACTCCCCTCTCCGGGGTTCTTTT 312 |||| |||| ||||| | | ||||| ||| ||| ||||||| | |||||||||| Sbjct 912 ACTGATTGTTCGCATCGGATCTCAGGTTCTCTATTGCACTCCC-TAAATAGGGTTCTTTT 854 Query 313 CGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGG 372 | |||||||||||||||||| || | |||||||||| | || | || |||| ||| |||| Sbjct 853 CACCTTTCCCTCACGGTACTTGTACGCTATCGGTCATTGAGGAATACTTAGGCTTAGAGG 794 Query 373 ATGGTCCCCC 382 ||||||||| Sbjct 793 GTGGTCCCCC 784 >seq87307 Length=6807 Score = 75.2 bits (82), Expect = 3e-11 Identities = 56/66 (85%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 305 GTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGC 364 || |||||| ||||||||| ||||||| |||| ||||||||| ||| |||||||||| Sbjct 2787 GTCCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCTCACCAGTATTTAGC 2846 Query 365 CTTGGA 370 |||||| Sbjct 2847 CTTGGA 2852 >seq39499 Length=5887 Score = 75.2 bits (82), Expect = 3e-11 Identities = 56/66 (85%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 305 GTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGC 364 || |||||| ||||||||| ||||||| |||| ||||||||| ||| |||||||||| Sbjct 5589 GTCCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCTCACCAGTATTTAGC 5530 Query 365 CTTGGA 370 |||||| Sbjct 5529 CTTGGA 5524 >seq14869 Length=26102 Score = 75.2 bits (82), Expect = 3e-11 Identities = 56/66 (85%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 305 GTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGC 364 || |||||| ||||||||| ||||||| |||| ||||||||| ||| |||||||||| Sbjct 23348 GTCCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCTCACCAGTATTTAGC 23407 Query 365 CTTGGA 370 |||||| Sbjct 23408 CTTGGA 23413 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1238818381440