Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687 525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq77831 215 1e-53 seq47755 215 1e-53 seq56876 210 4e-52 seq65666 187 5e-45 seq23665 149 1e-33 seq34883 118 2e-24 seq47 109 1e-21 seq7626 95.1 2e-17 seq78475 87.8 4e-15 >seq77831 Length=5325 Score = 215 bits (238), Expect = 1e-53 Identities = 232/305 (76%), Gaps = 18/305 (6%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||| | ||||| |||| ||||||| | || || ||||||||||||||||||||| Sbjct 700 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAG 759 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||||||||||||||||| |||||| | ||| |||||| | || ||||| ||| Sbjct 760 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGAT 819 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 | ||| |||||| |||||| ||||||||||| |||||| | ||||||||| || | Sbjct 820 CATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGACGCGAGCCCCTCCTCGG 879 Query 181 GC-GATAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTT 239 || ||| || || ||| ||||| | | || | ||||||||| Sbjct 880 GCGGATTCCTCCTT------------TTGC--TCCTCAGCC--TACGGGGTATTAGCAGC 923 Query 240 CGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCG 299 |||||||| ||| |||| ||| || || ||||| || ||| |||||||||||||||| Sbjct 924 CGTTTCCAGCTGTTGTTCCCCTCCCAAGGGTAGGTT-CTTACGCGTTACTCACCCGTCCG 982 Query 300 CCACT 304 ||||| Sbjct 983 CCACT 987 >seq47755 Length=5186 Score = 215 bits (238), Expect = 1e-53 Identities = 232/305 (76%), Gaps = 18/305 (6%) Strand=Plus/Minus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||| | ||||| |||| ||||||| | || || ||||||||||||||||||||| Sbjct 3598 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAG 3539 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||||||||||||||||| |||||| | ||| |||||| | || ||||| ||| Sbjct 3538 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGAT 3479 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 | ||| |||||| |||||| ||||||||||| |||||| | ||||||||| || | Sbjct 3478 CATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGACGCGAGCCCCTCCTCGG 3419 Query 181 GC-GATAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTT 239 || ||| || || ||| ||||| | | || | ||||||||| Sbjct 3418 GCGGATTCCTCCTT------------TTGC--TCCTCAGCC--TACGGGGTATTAGCAGC 3375 Query 240 CGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCG 299 |||||||| ||| |||| ||| || || ||||| || ||| |||||||||||||||| Sbjct 3374 CGTTTCCAGCTGTTGTTCCCCTCCCAAGGGTAGGTT-CTTACGCGTTACTCACCCGTCCG 3316 Query 300 CCACT 304 ||||| Sbjct 3315 CCACT 3311 >seq56876 Length=5270 Score = 210 bits (232), Expect = 4e-52 Identities = 231/305 (76%), Gaps = 18/305 (6%) Strand=Plus/Minus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||| | ||||| |||| ||||||| | || || ||||| ||||||||||||||| Sbjct 4890 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCATTGCTGCCTCCCGTAG 4831 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||||||||||||||||| |||||| | ||| |||||| | || ||||| ||| Sbjct 4830 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGAT 4771 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 | ||| |||||| |||||| ||||||||||| |||||| | ||||||||| || | Sbjct 4770 CATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGACGCGAGCCCCTCCTCGG 4711 Query 181 GC-GATAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTT 239 || ||| || || ||| ||||| | | || | ||||||||| Sbjct 4710 GCGGATTCCTCCTT------------TTGC--TCCTCAGCC--TACGGGGTATTAGCAGC 4667 Query 240 CGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCG 299 |||||||| ||| |||| ||| || || ||||| || ||| |||||||||||||||| Sbjct 4666 CGTTTCCAGCTGTTGTTCCCCTCCCAAGGGTAGGTT-CTTACGCGTTACTCACCCGTCCG 4608 Query 300 CCACT 304 ||||| Sbjct 4607 CCACT 4603 >seq65666 Length=4916 Score = 187 bits (206), Expect = 5e-45 Identities = 222/299 (74%), Gaps = 18/299 (6%) Strand=Plus/Minus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66 ||| | ||||| |||| ||||||| | || || ||||||||||||||||||||||||||| Sbjct 3001 GCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCT 2942 Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126 ||| ||||||||||||||| |||||| | ||| |||||| || ||||| |||| ||| Sbjct 2941 GGGTCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGAACCAGCTACTGATCATCGC 2882 Query 127 CTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCAGC-GAT 185 |||||| |||||| |||||||||| |||||| | ||||||||| || | || ||| Sbjct 2881 CTTGGTAAGCTATTGCTTCACCAACTAGCTAATCAGACGCGAGCCCCTCCTCGGGCGGAT 2822 Query 186 AAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTCGTTTC 245 || || ||| ||||| | | || | ||||||||| |||| Sbjct 2821 TCCTCCTT------------TTGC--TCCTCAGCC--TACGGGGTATTAGCAGCTGTTTT 2778 Query 246 CAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGCCACT 304 || ||| |||| ||| || || ||||| || ||| ||||||| ||||||||||||| Sbjct 2777 CAGCTGTTGTTCCCCTCCCAAGGGTAGGTT-CTTACGCGTTACTCCCCCGTCCGCCACT 2720 >seq23665 Length=469 Score = 149 bits (164), Expect = 1e-33 Identities = 117/140 (84%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||| | ||||| |||| |||||| | || || ||||||||||||||||||||| Sbjct 92 GGCATTGCTCCGTCAGGCTTTCGTCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAG 151 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||||||||||||||||| |||||| | ||| |||||| | || ||||| ||| Sbjct 152 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGAT 211 Query 121 CGTCGGCTTGGTGGGCTATT 140 | ||| |||||| |||||| Sbjct 212 CATCGCCTTGGTAAGCTATT 231 >seq34883 Length=18173 Score = 118 bits (130), Expect = 2e-24 Identities = 86/100 (86%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 53 TCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGG 112 ||||||||||||||||||||||||||||||||| |||||| | ||| |||||| | || | Sbjct 8280 TCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAG 8221 Query 113 CTACCGATCGTCGGCTTGGTGGGCTATTATCTCACCAACT 152 |||| |||| ||| |||||| |||||| |||||||||| Sbjct 8220 CTACTGATCATCGCCTTGGTAAGCTATTGCCTCACCAACT 8181 >seq47 Length=16403 Score = 109 bits (120), Expect = 1e-21 Identities = 75/85 (88%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||| | ||||| |||| ||||||| | || || ||||||||||||||||||||| Sbjct 1419 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAG 1360 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCA 85 ||||||||||||||||||||||||| Sbjct 1359 GAGTCTGGGCCGTGTCTCAGTCCCA 1335 >seq7626 Length=5844 Score = 95.1 bits (104), Expect = 2e-17 Identities = 90/115 (78%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66 ||| | ||||| ||| | ||||| | || || | |||||||||||||||||| |||||| Sbjct 443 GCTCCGTCAGGCTTTAGCTCATTGCGAAAAATTCTCCACTGCTGCCTCCCGTACGAGTCT 502 Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATC 121 ||| |||||||||||| | |||||| | ||| |||||| || |||| |||| Sbjct 503 AGGCTGTGTCTCAGTCCTAGTGTGGCTGATCATCCTCTCGAACCAACTACTGATC 557 >seq78475 Length=2463 Score = 87.8 bits (96), Expect = 4e-15 Identities = 117/160 (73%), Gaps = 2/160 (1%) Strand=Plus/Plus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66 ||| | ||| | |||| |||||| || || ||||||| || |||| ||||||||| Sbjct 971 GCTTCGTCAAGCTTTCACCCATTTCAAAAAATTCCCCACTACTACCTCTTATAGGAGTCT 1030 Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126 | ||||||||||| | | |||| | | ||| ||||| || | ||||| |||| || Sbjct 1031 AAGTCGTGTCTCAGT-CTAGTGTGACTGATCATCCTCTTAGACTAGCTACTGATCATCAC 1089 Query 127 CTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGC 166 || || |||||| ||||||||||| |||||| | ||| Sbjct 1090 ATTTGTAAGCTATT-GCTCACCAACTAGCTAATCAGACGC 1128 Score = 77.0 bits (84), Expect = 6e-12 Identities = 83/110 (75%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 16 GGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGT 75 || ||| ||||||||| || || | ||||| || |||||| |||||||||||| | | Sbjct 811 GGCTTTGGCCCATTGTGGAAAATTCTCCACTACTACCTCCCATAGGAGTCTGGGACACAT 752 Query 76 CTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCG 125 |||||||| | ||||| | ||| |||||| | || ||| |||| ||| Sbjct 751 CTCAGTCCGAGTGTGGTTGATCATCCTCTCGGACCAACTATTGATCATCG 702 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 996163234560