Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687 525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq24561 253 5e-65 seq39764 196 1e-47 seq9368 196 1e-47 seq38623 149 1e-33 seq59478 111 4e-22 seq38924 96.9 8e-18 seq62464 87.8 4e-15 seq109925 82.4 2e-13 >seq24561 Length=945 Score = 253 bits (280), Expect = 5e-65 Identities = 176/197 (89%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 205 TGCCACAGCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGAC 264 ||||||| ||||||||| |||| |||||||||||||| |||||||||||||||||||| Sbjct 553 TGCCACAACTTCGGCGGTGTACTTGAGCCCCGCTACATTGTCGGCGCGGAATCACTTGAC 612 Query 265 CAGTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTC 324 |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| Sbjct 613 CAGTGAGCTATTACGCACTCTTTCAAGGGTGGCTGCTTCTAAGCCAACCTCCTGGTTGTC 672 Query 325 TACGCAACTCCACATCCTTTCCCACTGAGTCAC-CACTTAGGGGCCTTAGCTGATGATCT 383 ||||||||||||||||||||||| || ||| | ||| ||| |||||| || || ||| Sbjct 673 AGAGCAACTCCACATCCTTTCCCACTTAG-CACGCGCTTTGGGACCTTAGTTGGTGGTCT 731 Query 384 GGGCTGTTTCCCTCTCG 400 ||| ||||||||||||| Sbjct 732 GGGTTGTTTCCCTCTCG 748 Score = 158 bits (174), Expect = 3e-36 Identities = 114/132 (86%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 |||||||||||||||| ||||||||||| ||||||| |||||||| ||| | ||||||| Sbjct 290 CGACTACGCCTGTCGGACTCGCCTTAGGTCCCGACTTACCCAGGGAAGATTAGCTTGACC 349 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACACGCTACTCATGCCTG 120 ||||||||||||| |||| ||||| | ||| ||| ||||| ||||||||||||||| Sbjct 350 CTGGAACCCTTGGTCTTTCGGAGGACGTGTTTCTCACACGTCATTCGCTACTCATGCCTG 409 Query 121 CATTCTCACTCG 132 |||||||||||| Sbjct 410 CATTCTCACTCG 421 >seq39764 Length=5682 Score = 196 bits (216), Expect = 1e-47 Identities = 259/348 (74%), Gaps = 20/348 (6%) Strand=Plus/Plus Query 63 GGAACCCTTGGATAATCGGCGGACGGGATTCCCACC--CGTCACACGCTACTCATGCCTG 120 ||||||||||| | |||| | | |||||| |||| ||| || |||||| ||| Sbjct 1129 GGAACCCTTGGGTTTTCGGGGCATTGGATTCTCACCAACGTTTG-CGTTACTCAAGCCGA 1187 Query 121 CATTCTCACT--CGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCACTGACACG 178 ||||||| || ||| || |||| ||| || | || |||| || || | || Sbjct 1188 CATTCTCGCTTCCGCTTCG--TCCAGCACTGC-TCGCGCGAGTCCTTCCCC-CTAAGGCG 1243 Query 179 --ACGCTCCCCTACCCAACCAC----ACAGGTTGCCACAGCTTCGGCGGATAACTTAAGC 232 ||||||||||||| | || ||| | ||||||||||||| ||| |||| || Sbjct 1244 GAACGCTCCCCTACCGATTCATTTTGACA---TCCCACAGCTTCGGCAGATCGCTTA-GC 1299 Query 233 CCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAGG 292 |||| | ||| ||||||| | | || || |||||||||||||||||||||||||||| Sbjct 1300 CCCGTT-CATCTTCGGCGCAAGAGCGCTCGATCAGTGAGCTATTACGCACTCTTTCAAGG 1358 Query 293 ATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTGA 352 |||||||||| | || |||||||||||||||| ||| | | || |||||| |||||| Sbjct 1359 GTGGCTGCTTCTAGGCAAACCTCCTGGTTGTCTCTGCACCCCTACCTCCTTTATCACTGA 1418 Query 353 GTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTCG 400 | || |||||||||||||||| ||||| ||||||||||||||||| Sbjct 1419 GCGGTCATTTAGGGGCCTTAGCTGGTGATCCGGGCTGTTTCCCTCTCG 1466 >seq9368 Length=5193 Score = 196 bits (216), Expect = 1e-47 Identities = 259/348 (74%), Gaps = 20/348 (6%) Strand=Plus/Minus Query 63 GGAACCCTTGGATAATCGGCGGACGGGATTCCCACC--CGTCACACGCTACTCATGCCTG 120 ||||||||||| | |||| | | |||||| |||| ||| || |||||| ||| Sbjct 4842 GGAACCCTTGGGTTTTCGGGGCATTGGATTCTCACCAACGTTTG-CGTTACTCAAGCCGA 4784 Query 121 CATTCTCACT--CGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCACTGACACG 178 ||||||| || ||| || |||| ||| || | || |||| || || | || Sbjct 4783 CATTCTCGCTTCCGCTTCG--TCCAGCACTGC-TCGCGCGAGTCCTTCCCC-CTAAGGCG 4728 Query 179 --ACGCTCCCCTACCCAACCAC----ACAGGTTGCCACAGCTTCGGCGGATAACTTAAGC 232 ||||||||||||| | || ||| | ||||||||||||| ||| |||| || Sbjct 4727 GAACGCTCCCCTACCGATTCATTTTGACA---TCCCACAGCTTCGGCAGATCGCTTA-GC 4672 Query 233 CCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAGG 292 |||| | ||| ||||||| | | || || |||||||||||||||||||||||||||| Sbjct 4671 CCCGTT-CATCTTCGGCGCAAGAGCGCTCGATCAGTGAGCTATTACGCACTCTTTCAAGG 4613 Query 293 ATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTGA 352 |||||||||| | || |||||||||||||||| ||| | | || |||||| |||||| Sbjct 4612 GTGGCTGCTTCTAGGCAAACCTCCTGGTTGTCTCTGCACCCCTACCTCCTTTATCACTGA 4553 Query 353 GTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTCG 400 | || |||||||||||||||| ||||| ||||||||||||||||| Sbjct 4552 GCGGTCATTTAGGGGCCTTAGCTGGTGATCCGGGCTGTTTCCCTCTCG 4505 >seq38623 Length=4117 Score = 149 bits (164), Expect = 1e-33 Identities = 118/142 (83%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 259 CTTGACCAGTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTG 318 || ||||||||||||||||||| |||| ||||||||||||||||||||| |||||||| Sbjct 1519 CTAGACCAGTGAGCTATTACGCTTTCTTCAAAGGATGGCTGCTTCCAAGCCCACCTCCTG 1460 Query 319 GTTGTCTACGCAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGAT 378 |||||| ||| ||| |||||| ||||| ||| | ||||||| ||||||| | Sbjct 1459 GTTGTCATCGCTCGATCACTTCCTTTTCCACTAAGTGATTGCTTAGGGACCTTAGCGTAC 1400 Query 379 GATCTGGGCTGTTTCCCTCTCG 400 |||||||||||||||||||||| Sbjct 1399 GATCTGGGCTGTTTCCCTCTCG 1378 >seq59478 Length=21411 Score = 111 bits (122), Expect = 4e-22 Identities = 109/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 259 CTTGACCAGTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTG 318 ||||| || ||| ||||||||||||||||||||| | | |||||| | || ||||||||| Sbjct 4577 CTTGATCAATGACCTATTACGCACTCTTTCAAGGGTTGTTGCTTCTAGGCAAACCTCCTG 4636 Query 319 GTTGTCTACGCAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGAT 378 ||| || ||| | | || ||||||| || | || | |||||||||||| ||| | Sbjct 4637 GTTCTCCCTGCACCCCTACCTCCTTTCTCAGTAAGCGGTTATTTAGGGGCCTTAACTGGT 4696 Query 379 GATCTGGGCTGTTTCCCTCTC 399 |||| || ||||||||| || Sbjct 4697 GATCCGGATTGTTTCCCTTTC 4717 >seq38924 Length=10334 Score = 96.9 bits (106), Expect = 8e-18 Identities = 81/97 (84%), Gaps = 2/97 (2%) Strand=Plus/Plus Query 207 CCACAGCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGACCA 266 ||||||||||||| ||| |||| |||||| | ||| ||||||| | | || || || Sbjct 5070 CCACAGCTTCGGCAGATCGCTTA-GCCCCGTT-CATCTTCGGCGCAAGAGCGCTCGATCA 5127 Query 267 GTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTC 303 |||||||||||||||||||||||||| |||||||||| Sbjct 5128 GTGAGCTATTACGCACTCTTTCAAGGGTGGCTGCTTC 5164 >seq62464 Length=4263 Score = 87.8 bits (96), Expect = 4e-15 Identities = 71/86 (83%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 315 CCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGC 374 ||||||||||| ||| | | || |||||| ||||||| || |||||||||||||| Sbjct 795 CCTGGTTGTCTCTGCACCCCTACCTCCTTTATCACTGAGCGGTCATTTAGGGGCCTTAGC 736 Query 375 TGATGATCTGGGCTGTTTCCCTCTCG 400 || ||||| ||||||||||||||||| Sbjct 735 TGGTGATCCGGGCTGTTTCCCTCTCG 710 >seq109925 Length=217 Score = 82.4 bits (90), Expect = 2e-13 Identities = 89/118 (75%), Gaps = 4/118 (3%) Strand=Plus/Plus Query 283 TCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCT 342 |||| |||||||||||||||||||| |||||||||||||| | | ||| |||| Sbjct 6 TCTTCAAAGGATGGCTGCTTCCAAGCTCACCTCCTGGTTGTCATCCCTCGATCACTTCCT 65 Query 343 TTCCCACTGAGTCACCACTTAGGGGCCTT----AGCTGATGATCTGGGCTGTTTCCCT 396 | ||||| ||| | ||||||| |||| ||| | |||||||| ||||||||| Sbjct 66 TCTCCACTAAGTGATTGCTTAGGGACCTTAGTGAGCGTACGATCTGGGTTGTTTCCCT 123 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1174961763840