Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687 525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq77831 150 3e-34 seq47755 150 3e-34 seq40508 136 7e-30 seq21280 100 5e-19 seq70018 98.7 2e-18 seq40246 96.9 6e-18 >seq77831 Length=5325 Score = 150 bits (166), Expect = 3e-34 Identities = 200/278 (72%), Gaps = 0/278 (0%) Strand=Plus/Plus Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTC 65 ||||||| ||||| |||||| | | |||||| || |||||| |||||||| | Sbjct 354 GCTTTCGTCTCTCAGTGTCAGTGTCGGCCCAGCAGAGTGCTTTCGCCGTTGGTGTTCTTT 413 Query 66 CGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAG 125 | || |||||||||||||||||| ||| | |||||| |||| || | | |||| || Sbjct 414 CCGATCTCTACGCATTTCACCGCTCCACCGGAAATTCCCTCTGCCCCTACCGTACTCCAG 473 Query 126 AAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCT 185 |||||| | || | ||||||||||| | ||| || | |||| Sbjct 474 CTTGGTAGTTTCCACCGCCTGTCCAGGGTTGAGCCCTGGGATTTGACGGCGAACTTAAAA 533 Query 186 TCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTA 245 || |||||| | |||||| |||||| | |||||||||||||||| ||| || ||| Sbjct 534 AGCCACCTACAGACGCTTTACGCCCAATCATTCCGGATAACGCTTGCATCCTCTGTCTTA 593 Query 246 CCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCC 283 |||||||||||||||| ||||||||| ||||||||| Sbjct 594 CCGCGGCTGCTGGCACAGAGTTAGCCGATGCTTATTCC 631 >seq47755 Length=5186 Score = 150 bits (166), Expect = 3e-34 Identities = 200/278 (72%), Gaps = 0/278 (0%) Strand=Plus/Minus Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTC 65 ||||||| ||||| |||||| | | |||||| || |||||| |||||||| | Sbjct 3944 GCTTTCGTCTCTCAGTGTCAGTGTCGGCCCAGCAGAGTGCTTTCGCCGTTGGTGTTCTTT 3885 Query 66 CGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAG 125 | || |||||||||||||||||| ||| | |||||| |||| || | | |||| || Sbjct 3884 CCGATCTCTACGCATTTCACCGCTCCACCGGAAATTCCCTCTGCCCCTACCGTACTCCAG 3825 Query 126 AAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCT 185 |||||| | || | ||||||||||| | ||| || | |||| Sbjct 3824 CTTGGTAGTTTCCACCGCCTGTCCAGGGTTGAGCCCTGGGATTTGACGGCGAACTTAAAA 3765 Query 186 TCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTA 245 || |||||| | |||||| |||||| | |||||||||||||||| ||| || ||| Sbjct 3764 AGCCACCTACAGACGCTTTACGCCCAATCATTCCGGATAACGCTTGCATCCTCTGTCTTA 3705 Query 246 CCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCC 283 |||||||||||||||| ||||||||| ||||||||| Sbjct 3704 CCGCGGCTGCTGGCACAGAGTTAGCCGATGCTTATTCC 3667 >seq40508 Length=5802 Score = 136 bits (150), Expect = 7e-30 Identities = 197/278 (71%), Gaps = 0/278 (0%) Strand=Plus/Minus Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTC 65 ||||||| ||||| |||||| | | |||||| | |||||| |||||||| | Sbjct 495 GCTTTCGTCTCTCAGTGTCAGTGTCGGCCCAGCAGAGTACTTTCGCCGTTGGTGTTCTTT 436 Query 66 CGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAG 125 | || |||||||||||||||||| ||| | |||||| |||| || | | |||| || Sbjct 435 CCGATCTCTACGCATTTCACCGCTCCACCGGAAATTCCCTCTGCCCCTACCGTACTCCAG 376 Query 126 AAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCT 185 |||||| | || | ||||| || || | ||| || | |||| Sbjct 375 CTTGGTAGTTTCCACCGCCTGTCCAGGGTTAAGTCCTGGGATTTGACGGCGAACTTAAAA 316 Query 186 TCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTA 245 || |||||| | |||||| |||||| | |||||||||||||||| ||| || ||| Sbjct 315 AGCCACCTACAAACACTTTACGCCCAATCATTCCGGATAACGCTTGCATCCTCTGTCTTA 256 Query 246 CCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCC 283 |||||||||||||||| ||||||||| ||||||||| Sbjct 255 CCGCGGCTGCTGGCACAGAGTTAGCCGATGCTTATTCC 218 >seq21280 Length=568 Score = 100 bits (110), Expect = 5e-19 Identities = 73/85 (86%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 199 CCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACCGCGGCTGCTGG 258 |||||||| |||||| | |||||||||||||||| ||| || |||||||||||||||| Sbjct 539 CCCTTTACGCCCAATCATTCCGGATAACGCTTGCATCCTCTGTCTTACCGCGGCTGCTGG 480 Query 259 CACGTAGTTAGCCGTGGCTTATTCC 283 ||| ||||||||| ||||||||| Sbjct 479 CACAGAGTTAGCCGATGCTTATTCC 455 >seq70018 Length=10099 Score = 98.7 bits (108), Expect = 2e-18 Identities = 196/285 (69%), Gaps = 4/285 (1%) Strand=Plus/Plus Query 8 TTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTCCG 67 ||||| ||||| |||||| | | | | || || || ||| |||| ||| | Sbjct 5067 TTTCGTCTCTCAGTGTCAGTGTCGGCCTAACAGAGTGCTTTTGCCGTTGGTATTCTTTTC 5126 Query 68 TATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAGAA 127 || | |||||||||||||||| ||| | ||||| |||| || | | |||| || Sbjct 5127 GATCTTTACGCATTTCACCGCTCCACCGGAAATTCTCTCTGCCCCTACCGTACTCCAGCT 5186 Query 128 AAACAGTTTCAAATG-CAGGCTATGGGTTGAGCCCATAGT-TTTCACATCTGACTTGCCT 185 |||||| | | | | | | |||||||| || |||| ||| || | |||| Sbjct 5187 TGGTAGTTTCCACCGTCTGTCCA-GGGTTGAGTCC-TAGTATTTGACGACGAACTTAAAA 5244 Query 186 TCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTA 245 || |||||| | |||||| |||||||| || |||||||||||| ||| || ||| Sbjct 5245 AGCCACCTACAGACGCTTTACGCCCAATAATTCTAGATAACGCTTGCATCCTCTGTCTTA 5304 Query 246 CCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 ||||| || || |||| ||||||||| ||||||||| ||| || Sbjct 5305 CCGCGACTACTAGCACAAAGTTAGCCGATGCTTATTCCCCAGATA 5349 >seq40246 Length=9070 Score = 96.9 bits (106), Expect = 6e-18 Identities = 79/96 (82%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247 || |||||| | |||||| |||||| | || ||||||||||||| ||| || ||||| Sbjct 4948 CCACCTACAGACGCTTTACGCCCAATCATTCTGGATAACGCTTGCATCCTCTGTCTTACC 5007 Query 248 GCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCC 283 |||||||||||||| ||||||||| ||||||||| Sbjct 5008 GCGGCTGCTGGCACAGAGTTAGCCGATGCTTATTCC 5043 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 827001222985