Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= AAMG01001844.1
Length=290
Score E
Sequences producing significant alignments: (Bits) Value
seq77831 150 3e-34
seq47755 150 3e-34
seq40508 136 7e-30
seq21280 100 5e-19
seq70018 98.7 2e-18
seq40246 96.9 6e-18
>seq77831
Length=5325
Score = 150 bits (166), Expect = 3e-34
Identities = 200/278 (72%), Gaps = 0/278 (0%)
Strand=Plus/Plus
Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTC 65
||||||| ||||| |||||| | | |||||| || |||||| |||||||| |
Sbjct 354 GCTTTCGTCTCTCAGTGTCAGTGTCGGCCCAGCAGAGTGCTTTCGCCGTTGGTGTTCTTT 413
Query 66 CGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAG 125
| || |||||||||||||||||| ||| | |||||| |||| || | | |||| ||
Sbjct 414 CCGATCTCTACGCATTTCACCGCTCCACCGGAAATTCCCTCTGCCCCTACCGTACTCCAG 473
Query 126 AAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCT 185
|||||| | || | ||||||||||| | ||| || | ||||
Sbjct 474 CTTGGTAGTTTCCACCGCCTGTCCAGGGTTGAGCCCTGGGATTTGACGGCGAACTTAAAA 533
Query 186 TCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTA 245
|| |||||| | |||||| |||||| | |||||||||||||||| ||| || |||
Sbjct 534 AGCCACCTACAGACGCTTTACGCCCAATCATTCCGGATAACGCTTGCATCCTCTGTCTTA 593
Query 246 CCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCC 283
|||||||||||||||| ||||||||| |||||||||
Sbjct 594 CCGCGGCTGCTGGCACAGAGTTAGCCGATGCTTATTCC 631
>seq47755
Length=5186
Score = 150 bits (166), Expect = 3e-34
Identities = 200/278 (72%), Gaps = 0/278 (0%)
Strand=Plus/Minus
Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTC 65
||||||| ||||| |||||| | | |||||| || |||||| |||||||| |
Sbjct 3944 GCTTTCGTCTCTCAGTGTCAGTGTCGGCCCAGCAGAGTGCTTTCGCCGTTGGTGTTCTTT 3885
Query 66 CGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAG 125
| || |||||||||||||||||| ||| | |||||| |||| || | | |||| ||
Sbjct 3884 CCGATCTCTACGCATTTCACCGCTCCACCGGAAATTCCCTCTGCCCCTACCGTACTCCAG 3825
Query 126 AAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCT 185
|||||| | || | ||||||||||| | ||| || | ||||
Sbjct 3824 CTTGGTAGTTTCCACCGCCTGTCCAGGGTTGAGCCCTGGGATTTGACGGCGAACTTAAAA 3765
Query 186 TCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTA 245
|| |||||| | |||||| |||||| | |||||||||||||||| ||| || |||
Sbjct 3764 AGCCACCTACAGACGCTTTACGCCCAATCATTCCGGATAACGCTTGCATCCTCTGTCTTA 3705
Query 246 CCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCC 283
|||||||||||||||| ||||||||| |||||||||
Sbjct 3704 CCGCGGCTGCTGGCACAGAGTTAGCCGATGCTTATTCC 3667
>seq40508
Length=5802
Score = 136 bits (150), Expect = 7e-30
Identities = 197/278 (71%), Gaps = 0/278 (0%)
Strand=Plus/Minus
Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTC 65
||||||| ||||| |||||| | | |||||| | |||||| |||||||| |
Sbjct 495 GCTTTCGTCTCTCAGTGTCAGTGTCGGCCCAGCAGAGTACTTTCGCCGTTGGTGTTCTTT 436
Query 66 CGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAG 125
| || |||||||||||||||||| ||| | |||||| |||| || | | |||| ||
Sbjct 435 CCGATCTCTACGCATTTCACCGCTCCACCGGAAATTCCCTCTGCCCCTACCGTACTCCAG 376
Query 126 AAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCT 185
|||||| | || | ||||| || || | ||| || | ||||
Sbjct 375 CTTGGTAGTTTCCACCGCCTGTCCAGGGTTAAGTCCTGGGATTTGACGGCGAACTTAAAA 316
Query 186 TCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTA 245
|| |||||| | |||||| |||||| | |||||||||||||||| ||| || |||
Sbjct 315 AGCCACCTACAAACACTTTACGCCCAATCATTCCGGATAACGCTTGCATCCTCTGTCTTA 256
Query 246 CCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCC 283
|||||||||||||||| ||||||||| |||||||||
Sbjct 255 CCGCGGCTGCTGGCACAGAGTTAGCCGATGCTTATTCC 218
>seq21280
Length=568
Score = 100 bits (110), Expect = 5e-19
Identities = 73/85 (86%), Gaps = 0/85 (0%)
Strand=Plus/Minus
Query 199 CCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACCGCGGCTGCTGG 258
|||||||| |||||| | |||||||||||||||| ||| || ||||||||||||||||
Sbjct 539 CCCTTTACGCCCAATCATTCCGGATAACGCTTGCATCCTCTGTCTTACCGCGGCTGCTGG 480
Query 259 CACGTAGTTAGCCGTGGCTTATTCC 283
||| ||||||||| |||||||||
Sbjct 479 CACAGAGTTAGCCGATGCTTATTCC 455
>seq70018
Length=10099
Score = 98.7 bits (108), Expect = 2e-18
Identities = 196/285 (69%), Gaps = 4/285 (1%)
Strand=Plus/Plus
Query 8 TTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTCCG 67
||||| ||||| |||||| | | | | || || || ||| |||| ||| |
Sbjct 5067 TTTCGTCTCTCAGTGTCAGTGTCGGCCTAACAGAGTGCTTTTGCCGTTGGTATTCTTTTC 5126
Query 68 TATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAGAA 127
|| | |||||||||||||||| ||| | ||||| |||| || | | |||| ||
Sbjct 5127 GATCTTTACGCATTTCACCGCTCCACCGGAAATTCTCTCTGCCCCTACCGTACTCCAGCT 5186
Query 128 AAACAGTTTCAAATG-CAGGCTATGGGTTGAGCCCATAGT-TTTCACATCTGACTTGCCT 185
|||||| | | | | | | |||||||| || |||| ||| || | ||||
Sbjct 5187 TGGTAGTTTCCACCGTCTGTCCA-GGGTTGAGTCC-TAGTATTTGACGACGAACTTAAAA 5244
Query 186 TCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTA 245
|| |||||| | |||||| |||||||| || |||||||||||| ||| || |||
Sbjct 5245 AGCCACCTACAGACGCTTTACGCCCAATAATTCTAGATAACGCTTGCATCCTCTGTCTTA 5304
Query 246 CCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290
||||| || || |||| ||||||||| ||||||||| ||| ||
Sbjct 5305 CCGCGACTACTAGCACAAAGTTAGCCGATGCTTATTCCCCAGATA 5349
>seq40246
Length=9070
Score = 96.9 bits (106), Expect = 6e-18
Identities = 79/96 (82%), Gaps = 0/96 (0%)
Strand=Plus/Plus
Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247
|| |||||| | |||||| |||||| | || ||||||||||||| ||| || |||||
Sbjct 4948 CCACCTACAGACGCTTTACGCCCAATCATTCTGGATAACGCTTGCATCCTCTGTCTTACC 5007
Query 248 GCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCC 283
|||||||||||||| ||||||||| |||||||||
Sbjct 5008 GCGGCTGCTGGCACAGAGTTAGCCGATGCTTATTCC 5043
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 827001222985
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |